Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00647 ATGACTGAAAATGTGGCGTCACCTCCGTTGAAGCTTTACTCGTCCTGGAGGAGCTCTTGTTCTCAACGTGTTCGAATTGCCCTAAACTTGAAAGGGCTAAATTTCGAGTACAAAGCCGTTAACCTACTGAAGGGAGAGCAATTCACTCCCGAATATGAAAAACTCAATCCTATCGGTTATGTACCTACTCTCGTGGATGGGGATATCGTTATTGCCGACTCTTTTGCTATATTAATGTATTTAGAGGAGAAGTATCCTCAGCATCCTCTGTTGCCAAGTGATCTGAGTAAAAGAGCTGTTAATTATCAGGCTGCAAACATTGTTTCTTCTAGCATACAGCCTCTTCAAAATCTAGTTGTTCTGAAGTACATCGAGGAAAAATCTGGTCCAGAGGAAAAACTTCATTGGGTTCAACGTGTCATTGAAAAAGGTTTTACAGCACTTGAAAAGCTGCTAAAAGCTCATGCTGGAAAATTTGCTACTGGAGATGAAATCTTTCTGGCGGACGTGTTTTTGGCTCCTCAAATTCATGGCGCCATTAATAGATTCAGTGTTGACATGTCCAAATTTCCACTTTTATCCAGGTTGAATGATGAATACAATGCCATAGCAGCATTTCAAGATGCAGAGCCATCAAAGCAGCCTGATGCTCCTCAAAGCTCTAGCTAA 669 41.41 MTENVASPPLKLYSSWRSSCSQRVRIALNLKGLNFEYKAVNLLKGEQFTPEYEKLNPIGYVPTLVDGDIVIADSFAILMYLEEKYPQHPLLPSDLSKRAVNYQAANIVSSSIQPLQNLVVLKYIEEKSGPEEKLHWVQRVIEKGFTALEKLLKAHAGKFATGDEIFLADVFLAPQIHGAINRFSVDMSKFPLLSRLNDEYNAIAAFQDAEPSKQPDAPQSSS 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4034616 4038895 + CmoCh02G006470.1 Cmo02g00647 376244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00647 222 SFLD Main (cytGST) 10 195 - -
Cmo02g00647 222 Pfam Glutathione S-transferase, C-terminal domain 123 202 IPR004046 -
Cmo02g00647 222 CDD GST_N_Zeta 10 82 IPR034333 -
Cmo02g00647 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 94 219 IPR010987 -
Cmo02g00647 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 89 IPR004045 -
Cmo02g00647 222 Gene3D Glutaredoxin 9 92 - -
Cmo02g00647 222 Pfam Glutathione S-transferase, N-terminal domain 12 88 IPR004045 -
Cmo02g00647 222 SFLD Glutathione Transferase (cytosolic) 10 195 IPR040079 -
Cmo02g00647 222 Gene3D - 93 220 - -
Cmo02g00647 222 SUPERFAMILY GST C-terminal domain-like 89 218 IPR036282 -
Cmo02g00647 222 CDD GST_C_Zeta 97 214 IPR034330 -
Cmo02g00647 222 TIGRFAM maiA: maleylacetoacetate isomerase 11 217 IPR005955 GO:0003824|GO:0005737|GO:0009072
Cmo02g00647 222 PANTHER MALEYLACETOACETATE ISOMERASE 6 218 - -
Cmo02g00647 222 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 6 218 - -
Cmo02g00647 222 SUPERFAMILY Thioredoxin-like 7 92 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00647 Cmo-Chr2:4034616 Cmo06g01161 Cmo-Chr6:8901168 1.42E-91 dispersed
Cmo17g01082 Cmo-Chr17:8958042 Cmo02g00647 Cmo-Chr2:4034616 6.21E-10 dispersed
Cmo02g00645 Cmo-Chr2:4025129 Cmo02g00647 Cmo-Chr2:4034616 5.48E-115 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00647 K01800 - csv:101213302 369.007