Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00667 ATGACTATGACGGTCGCCGCAAGAGCAATCGCAACGGCTCGATCAGTGGTGCGAGCGAGCAGGCTCCGTAATGTGTTTACTGCGCTGAAATCTCAGTCTCACGCTCTTCTCATTCGTCAGATGAGCTCGGAGGCGCAGAGTATGCTCTCCGAGGAGCAGAGCATGAGCTCGGAGGTGCAGAGCATCGCCGCTCGTCTTCGTAATTCTGGACTGTTACGAAGCCAAGGCCTCATTGGCGGCCAGTGGATTGATGCTTACGATGGGAGGACCATTAAGATAAACTACGGAGCCAGCTTTCTTGAATTCTTTTCCGAGGAAGCAAAACGAGTATACGGTGACATAATCTCACCAACTATAGCTGATCGTCGACTTTTTGTGTTGAAGCAGCCAGTTGGAGTTGTTGGTGTTATTACCCCTTGGAACTTTCCGTTGGCTATGATTACACGGAAGGTTGCACCTGCTCTTGCATGTGGTTGTACGGTGGTCATAAAACCCTCTGAACTTACTCCCTTGACAGCTTTAGCAGCAGCTGAGCTCTCATTGCAAGCTGGAATTCCCCCAGGTGTAGTGAATGTGGTTATGGGAGATGCTCCTGCTATTGGGGATGCTATACTTGCAAGTACACAGGTTAGAAAAATCACGTTTACTGGCTCAACAGCAGTTGGAAAAAAATTGATGGCTGGAGCTGCTGGGACTGTTAAAAAGGTGTCCTTAGAACTTGGGGGTAATGCACCTCACATAGTCTTTGATGATGCAGATGTGGATGTTGCAGTAAAAGGAGTTATTGCATCGAAGTTTCGGAATAGTGGACAGACTTGTGTTTCTGCCAATAGGATCCTTGTTCAAGAAGGCATATACGAGAAATTTTGTAATGCTTTCTCAAAAGCTGCGCAAGATCTGCAAGTTGGTGATGGGTTTGGTGAAGGTGTTGCTCAGGGTCCTTTGATTAATGAAGCTGCCGTGCAGAAGGTTGAGAAATTTCTTCAAGATGCCATCACAAAGCCAGTCTTTTTTGTAGTTGTCAGTTGGGTCGTAGTATTCAAGTCCTTTTTTGATAACCTTCTTCTAAGAATGCCTTTAACAGAGGAGGAAGCAATTGGTCTCGCTAATGACGCCAATGCAGGATTAGCTGCTTGCGTATACACAAATAATATTCAACGTTCATGGAGAATGACTGAAGCTCTTGAATATGGAATGGTTGGTGTTAATGAAAGCCTAATTGCTACAGAGGTGGCTCCATTTGGTGGCATTAAACAGTCAGGCCTTGGTCGGGAAGGATCCAAATATGGGATGGACGATTATCTTGAGAGGAAAAAACAAACCATCAGTCCACTTTTAAGACAGTTTAAGAAGCTTCTCAAAATAGGCCAATGTGTGTCCAAGGAGATTCCGGTCTCGTCCTCACCACCGACCCCAAGCCCCGTCTCCGCTGGACAGTCGAGCTCCACGAGCGCTTCGTCGACGCTGTCACTCAGCTCGGAGGACCCGACAAAGTTCAGGCTCGGGAAGCAACCGCACAAGGAATTCAACGATCAATCGATAAAGGATGGCATGAGAGCTTCAGCCTTAGAACTTCATAGAAACAGTGGATCTTCTTCCACCTTAATGGACCGTAGCATGAACGAAATGCAATTGGAGGTCCAAAGACGGCTGCATGAACAAATTGAGGTACAAAGACATCTTCAATTGAGGATTGAGGCTCAAGGCAAATACATGCAAAGCATATTGGAGAAAGCTTGCCAAACCCTCGCCGGCGAAAACATGGCCGCCGCCGCCGCCGCCGCCGCCGCCGGACGTTTCAAAACCACTTCCAACAATATTGGAACAACCACCAATCTTGTTTCAGACGCTGCCAACAAGGCCTTCATTTCACCTCCTCCTCCTCCTCCTCACACCTTCCCTCCTTTTCAAGACATCAACAACCTATTTACCTCGGAACCACCGGCGCCTGCGCCGCCTCTTATCGACTGCCTCAAGAAGCCGAACCCCTTCATCTCCGACACCGGTAAGACTCCCATTTTCTGGGCCGATGATCTCCGTCTCCAGGACTTAGGAACCCCGTCGGCCACCCTAGCGCCACCACCGCCACCCATCAATGGCTCGGCTGACTTGGACCCTCAACAGCTGGAAATGTATGAAACTAAGCCACCGCCACTGCTGCTCTCCGTTGGCAACGATGTGATGGCGAATGAGAAGAAGTTCGACGTGTCGTTAAAGCTCGAGGGACCGTCACCGCGACATTCGTCGGGGCATTCCGATGAGAAGGTGAATAACAATAATAACCCTACAATGTCACAATCACAGGGAAGAAATAACTCTCATTTGGGTTAA 2331 48.61 MTMTVAARAIATARSVVRASRLRNVFTALKSQSHALLIRQMSSEAQSMLSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKINYGASFLEFFSEEAKRVYGDIISPTIADRRLFVLKQPVGVVGVITPWNFPLAMITRKVAPALACGCTVVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGDAPAIGDAILASTQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPHIVFDDADVDVAVKGVIASKFRNSGQTCVSANRILVQEGIYEKFCNAFSKAAQDLQVGDGFGEGVAQGPLINEAAVQKVEKFLQDAITKPVFFVVVSWVVVFKSFFDNLLLRMPLTEEEAIGLANDANAGLAACVYTNNIQRSWRMTEALEYGMVGVNESLIATEVAPFGGIKQSGLGREGSKYGMDDYLERKKQTISPLLRQFKKLLKIGQCVSKEIPVSSSPPTPSPVSAGQSSSTSASSTLSLSSEDPTKFRLGKQPHKEFNDQSIKDGMRASALELHRNSGSSSTLMDRSMNEMQLEVQRRLHEQIEVQRHLQLRIEAQGKYMQSILEKACQTLAGENMAAAAAAAAAGRFKTTSNNIGTTTNLVSDAANKAFISPPPPPPHTFPPFQDINNLFTSEPPAPAPPLIDCLKKPNPFISDTGKTPIFWADDLRLQDLGTPSATLAPPPPPINGSADLDPQQLEMYETKPPPLLLSVGNDVMANEKKFDVSLKLEGPSPRHSSGHSDEKVNNNNNPTMSQSQGRNNSHLG 776
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4194807 4215618 + CmoCh02G006670.1 Cmo02g00667 376264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00667 776 MobiDBLite consensus disorder prediction 734 776 - -
Cmo02g00667 776 MobiDBLite consensus disorder prediction 463 509 - -
Cmo02g00667 776 Pfam MYB-CC type transfactor, LHEQLE motif 543 582 IPR025756 -
Cmo02g00667 776 MobiDBLite consensus disorder prediction 463 497 - -
Cmo02g00667 776 MobiDBLite consensus disorder prediction 754 776 - -
Cmo02g00667 776 MobiDBLite consensus disorder prediction 685 704 - -
Cmo02g00667 776 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 361 439 - -
Cmo02g00667 776 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 93 334 - -
Cmo02g00667 776 SUPERFAMILY ALDH-like 86 442 IPR016161 GO:0016491
Cmo02g00667 776 Pfam Aldehyde dehydrogenase family 90 334 IPR015590 GO:0016491
Cmo02g00667 776 Pfam Aldehyde dehydrogenase family 361 438 IPR015590 GO:0016491
Cmo02g00667 776 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 242 339 IPR016163 GO:0016620
Cmo02g00667 776 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 238 245 IPR029510 GO:0016491
Cmo02g00667 776 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 340 446 IPR016163 GO:0016620
Cmo02g00667 776 MobiDBLite consensus disorder prediction 734 753 - -
Cmo02g00667 776 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 361 439 - -
Cmo02g00667 776 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 93 334 - -
Cmo02g00667 776 CDD ALDH_F5_SSADH_GabD 93 438 - -
Cmo02g00667 776 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 4 241 IPR016162 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00667 Cmo-Chr2:4194807 Cmo20g00312 Cmo-Chr20:1530207 2.12E-121 dispersed
Cmo02g00667 Cmo-Chr2:4194807 Cmo20g00311 Cmo-Chr20:1515459 1.96E-21 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00667 K17761 - csv:101217352 529.635