Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo02g00667 | ATGACTATGACGGTCGCCGCAAGAGCAATCGCAACGGCTCGATCAGTGGTGCGAGCGAGCAGGCTCCGTAATGTGTTTACTGCGCTGAAATCTCAGTCTCACGCTCTTCTCATTCGTCAGATGAGCTCGGAGGCGCAGAGTATGCTCTCCGAGGAGCAGAGCATGAGCTCGGAGGTGCAGAGCATCGCCGCTCGTCTTCGTAATTCTGGACTGTTACGAAGCCAAGGCCTCATTGGCGGCCAGTGGATTGATGCTTACGATGGGAGGACCATTAAGATAAACTACGGAGCCAGCTTTCTTGAATTCTTTTCCGAGGAAGCAAAACGAGTATACGGTGACATAATCTCACCAACTATAGCTGATCGTCGACTTTTTGTGTTGAAGCAGCCAGTTGGAGTTGTTGGTGTTATTACCCCTTGGAACTTTCCGTTGGCTATGATTACACGGAAGGTTGCACCTGCTCTTGCATGTGGTTGTACGGTGGTCATAAAACCCTCTGAACTTACTCCCTTGACAGCTTTAGCAGCAGCTGAGCTCTCATTGCAAGCTGGAATTCCCCCAGGTGTAGTGAATGTGGTTATGGGAGATGCTCCTGCTATTGGGGATGCTATACTTGCAAGTACACAGGTTAGAAAAATCACGTTTACTGGCTCAACAGCAGTTGGAAAAAAATTGATGGCTGGAGCTGCTGGGACTGTTAAAAAGGTGTCCTTAGAACTTGGGGGTAATGCACCTCACATAGTCTTTGATGATGCAGATGTGGATGTTGCAGTAAAAGGAGTTATTGCATCGAAGTTTCGGAATAGTGGACAGACTTGTGTTTCTGCCAATAGGATCCTTGTTCAAGAAGGCATATACGAGAAATTTTGTAATGCTTTCTCAAAAGCTGCGCAAGATCTGCAAGTTGGTGATGGGTTTGGTGAAGGTGTTGCTCAGGGTCCTTTGATTAATGAAGCTGCCGTGCAGAAGGTTGAGAAATTTCTTCAAGATGCCATCACAAAGCCAGTCTTTTTTGTAGTTGTCAGTTGGGTCGTAGTATTCAAGTCCTTTTTTGATAACCTTCTTCTAAGAATGCCTTTAACAGAGGAGGAAGCAATTGGTCTCGCTAATGACGCCAATGCAGGATTAGCTGCTTGCGTATACACAAATAATATTCAACGTTCATGGAGAATGACTGAAGCTCTTGAATATGGAATGGTTGGTGTTAATGAAAGCCTAATTGCTACAGAGGTGGCTCCATTTGGTGGCATTAAACAGTCAGGCCTTGGTCGGGAAGGATCCAAATATGGGATGGACGATTATCTTGAGAGGAAAAAACAAACCATCAGTCCACTTTTAAGACAGTTTAAGAAGCTTCTCAAAATAGGCCAATGTGTGTCCAAGGAGATTCCGGTCTCGTCCTCACCACCGACCCCAAGCCCCGTCTCCGCTGGACAGTCGAGCTCCACGAGCGCTTCGTCGACGCTGTCACTCAGCTCGGAGGACCCGACAAAGTTCAGGCTCGGGAAGCAACCGCACAAGGAATTCAACGATCAATCGATAAAGGATGGCATGAGAGCTTCAGCCTTAGAACTTCATAGAAACAGTGGATCTTCTTCCACCTTAATGGACCGTAGCATGAACGAAATGCAATTGGAGGTCCAAAGACGGCTGCATGAACAAATTGAGGTACAAAGACATCTTCAATTGAGGATTGAGGCTCAAGGCAAATACATGCAAAGCATATTGGAGAAAGCTTGCCAAACCCTCGCCGGCGAAAACATGGCCGCCGCCGCCGCCGCCGCCGCCGCCGGACGTTTCAAAACCACTTCCAACAATATTGGAACAACCACCAATCTTGTTTCAGACGCTGCCAACAAGGCCTTCATTTCACCTCCTCCTCCTCCTCCTCACACCTTCCCTCCTTTTCAAGACATCAACAACCTATTTACCTCGGAACCACCGGCGCCTGCGCCGCCTCTTATCGACTGCCTCAAGAAGCCGAACCCCTTCATCTCCGACACCGGTAAGACTCCCATTTTCTGGGCCGATGATCTCCGTCTCCAGGACTTAGGAACCCCGTCGGCCACCCTAGCGCCACCACCGCCACCCATCAATGGCTCGGCTGACTTGGACCCTCAACAGCTGGAAATGTATGAAACTAAGCCACCGCCACTGCTGCTCTCCGTTGGCAACGATGTGATGGCGAATGAGAAGAAGTTCGACGTGTCGTTAAAGCTCGAGGGACCGTCACCGCGACATTCGTCGGGGCATTCCGATGAGAAGGTGAATAACAATAATAACCCTACAATGTCACAATCACAGGGAAGAAATAACTCTCATTTGGGTTAA | 2331 | 48.61 | MTMTVAARAIATARSVVRASRLRNVFTALKSQSHALLIRQMSSEAQSMLSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKINYGASFLEFFSEEAKRVYGDIISPTIADRRLFVLKQPVGVVGVITPWNFPLAMITRKVAPALACGCTVVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGDAPAIGDAILASTQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPHIVFDDADVDVAVKGVIASKFRNSGQTCVSANRILVQEGIYEKFCNAFSKAAQDLQVGDGFGEGVAQGPLINEAAVQKVEKFLQDAITKPVFFVVVSWVVVFKSFFDNLLLRMPLTEEEAIGLANDANAGLAACVYTNNIQRSWRMTEALEYGMVGVNESLIATEVAPFGGIKQSGLGREGSKYGMDDYLERKKQTISPLLRQFKKLLKIGQCVSKEIPVSSSPPTPSPVSAGQSSSTSASSTLSLSSEDPTKFRLGKQPHKEFNDQSIKDGMRASALELHRNSGSSSTLMDRSMNEMQLEVQRRLHEQIEVQRHLQLRIEAQGKYMQSILEKACQTLAGENMAAAAAAAAAGRFKTTSNNIGTTTNLVSDAANKAFISPPPPPPHTFPPFQDINNLFTSEPPAPAPPLIDCLKKPNPFISDTGKTPIFWADDLRLQDLGTPSATLAPPPPPINGSADLDPQQLEMYETKPPPLLLSVGNDVMANEKKFDVSLKLEGPSPRHSSGHSDEKVNNNNNPTMSQSQGRNNSHLG | 776 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4194807 | 4215618 | + | CmoCh02G006670.1 | Cmo02g00667 | 376264 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo02g00667 | 776 | MobiDBLite | consensus disorder prediction | 734 | 776 | - | - | |
Cmo02g00667 | 776 | MobiDBLite | consensus disorder prediction | 463 | 509 | - | - | |
Cmo02g00667 | 776 | Pfam | MYB-CC type transfactor, LHEQLE motif | 543 | 582 | IPR025756 | - | |
Cmo02g00667 | 776 | MobiDBLite | consensus disorder prediction | 463 | 497 | - | - | |
Cmo02g00667 | 776 | MobiDBLite | consensus disorder prediction | 754 | 776 | - | - | |
Cmo02g00667 | 776 | MobiDBLite | consensus disorder prediction | 685 | 704 | - | - | |
Cmo02g00667 | 776 | PANTHER | SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL | 361 | 439 | - | - | |
Cmo02g00667 | 776 | PANTHER | SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL | 93 | 334 | - | - | |
Cmo02g00667 | 776 | SUPERFAMILY | ALDH-like | 86 | 442 | IPR016161 | GO:0016491 | |
Cmo02g00667 | 776 | Pfam | Aldehyde dehydrogenase family | 90 | 334 | IPR015590 | GO:0016491 | |
Cmo02g00667 | 776 | Pfam | Aldehyde dehydrogenase family | 361 | 438 | IPR015590 | GO:0016491 | |
Cmo02g00667 | 776 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 242 | 339 | IPR016163 | GO:0016620 | |
Cmo02g00667 | 776 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 238 | 245 | IPR029510 | GO:0016491 | |
Cmo02g00667 | 776 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 340 | 446 | IPR016163 | GO:0016620 | |
Cmo02g00667 | 776 | MobiDBLite | consensus disorder prediction | 734 | 753 | - | - | |
Cmo02g00667 | 776 | PANTHER | SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL | 361 | 439 | - | - | |
Cmo02g00667 | 776 | PANTHER | SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL | 93 | 334 | - | - | |
Cmo02g00667 | 776 | CDD | ALDH_F5_SSADH_GabD | 93 | 438 | - | - | |
Cmo02g00667 | 776 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 4 | 241 | IPR016162 | GO:0016491 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00667 | Cmo-Chr2:4194807 | Cmo20g00312 | Cmo-Chr20:1530207 | 2.12E-121 | dispersed | |
Cmo02g00667 | Cmo-Chr2:4194807 | Cmo20g00311 | Cmo-Chr20:1515459 | 1.96E-21 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo02g00667 | K17761 | - | csv:101217352 | 529.635 |