Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00676 GCTTCCCACGAACATCTTCCTCTCTTTATAACCATATCCAAATCAAAATCACATTATTCATCAATGGCTTCAATGGCTTCTTTCGTCCTCTTCCTCCTCTTCCATCTTCATTTGGTCACGGCGGCTCTCGGGGTTCAACCGGTGATTACCGCCGCCTCTATGGTGAGTCGTGCACCGCCGCCACCGGCCTCTCTATTGTCCCACTCCTTTTATCGTCGGACATGTCCAGATGCTGAGGGCATCATTCATCGAAAAGTGCAAGCTTGGGTCAACAAGGATTTCACGTTGGCTGCTGCCCTCATTCGTTTGCATTTTCACGATTGTGCAGTTAGGGGTTGCGATGCGTCGATTCTACTGAACTATCGAAGAAGCGAGAGAAGAGCCTTAGCCAGCAAAACCCTCAGGGGTTTCCGAGTGATCGACGACATCAAGGCTGAGCTCGAGAGAAAATGCCCTAGAACCGTCTCCTGCTCCGACATTCTCACCGCCGCCGCCAGAGACGCCACCATTCTCGCCGGAGGTCCCTTCTGGGAGGTTCCATTTGGCCGTAAAGACGGAAGAATCACCATCGCTGCCGAAGCAGAACGTGTCCCTCAGGGCCGGGAAAACGTCACCGCTTTGATCGACTACTTCCGACACCTAGGGCTCGACGTCCTCGATTTGGTCGCCCTCTCCGGCGCCCACACCATCGGCCGAGCCGCCTGCCACACCTTCAATGATAGGCTATACAACTTCAACAGGACCCGAAAACCCGACCCGAATCTGAAACCTCCATTTCTGAATTTACTTCGAAGGCAGTGTAAGAAGGATATGGATCTCGTTTTTCTCGACGCAACGACTCCGAAAATGTTCGATACTGCTTACTTCAAGAATCTTCAGAAGAAATTAGGGCTTCTTACGACGGATCAAGCGCTGCAATCGGATGAAAGAACTTCTTCGTTTGTTGATTTGATGGGAAATCAACCGTTTCTTTTTGAAAGCCAATTTTCGGCGTCGATGGTGAAATTGGGGAATGTTGGAGTGCTGGTGAGGAAAAATGAAGGCGAAATTCGAGTCAATTGCAATTTCATTAACCGCAGAAGAAAGTGA 1089 50.23 ASHEHLPLFITISKSKSHYSSMASMASFVLFLLFHLHLVTAALGVQPVITAASMVSRAPPPPASLLSHSFYRRTCPDAEGIIHRKVQAWVNKDFTLAAALIRLHFHDCAVRGCDASILLNYRRSERRALASKTLRGFRVIDDIKAELERKCPRTVSCSDILTAAARDATILAGGPFWEVPFGRKDGRITIAAEAERVPQGRENVTALIDYFRHLGLDVLDLVALSGAHTIGRAACHTFNDRLYNFNRTRKPDPNLKPPFLNLLRRQCKKDMDLVFLDATTPKMFDTAYFKNLQKKLGLLTTDQALQSDERTSSFVDLMGNQPFLFESQFSASMVKLGNVGVLVRKNEGEIRVNCNFINRRRK 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4288488 4290057 - CmoCh02G006760.1 Cmo02g00676 376273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00676 362 ProSiteProfiles Plant heme peroxidase family profile. 65 358 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00676 362 Pfam Peroxidase 84 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00676 362 PRINTS Plant peroxidase signature 135 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00676 362 PRINTS Plant peroxidase signature 99 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00676 362 PRINTS Plant peroxidase signature 173 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00676 362 PRINTS Plant peroxidase signature 154 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00676 362 PRINTS Plant peroxidase signature 291 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00676 362 PRINTS Plant peroxidase signature 219 231 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00676 362 PRINTS Plant peroxidase signature 275 290 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00676 362 PRINTS Plant peroxidase signature 331 344 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00676 362 PRINTS Plant peroxidase signature 75 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00676 362 CDD secretory_peroxidase 66 357 IPR033905 GO:0004601|GO:0042744
Cmo02g00676 362 Gene3D Peroxidase, domain 2 198 336 - -
Cmo02g00676 362 ProSitePatterns Peroxidases active site signature. 97 108 IPR019794 GO:0004601
Cmo02g00676 362 PANTHER PEROXIDASE 46 357 - -
Cmo02g00676 362 SUPERFAMILY Heme-dependent peroxidases 66 358 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo02g00676 362 PANTHER PEROXIDASE 25-RELATED 46 357 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00676 362 Gene3D - 69 358 - -
Cmo02g00676 362 PRINTS Haem peroxidase superfamily signature 97 111 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00676 362 PRINTS Haem peroxidase superfamily signature 173 185 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00676 362 PRINTS Haem peroxidase superfamily signature 155 172 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00676 362 PRINTS Haem peroxidase superfamily signature 220 235 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00676 362 PRINTS Haem peroxidase superfamily signature 277 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00676 362 ProSitePatterns Peroxidases proximal heme-ligand signature. 220 230 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00676 Cmo-Chr2:4288488 Cmo03g01001 Cmo-Chr3:7539228 9.09E-86 dispersed
Cmo08g00194 Cmo-Chr8:1131803 Cmo02g00676 Cmo-Chr2:4288488 8.23E-57 transposed
Cmo18g00243 Cmo-Chr18:1606394 Cmo02g00676 Cmo-Chr2:4288488 3.97E-99 transposed
Cmo20g00316 Cmo-Chr20:1544023 Cmo02g00676 Cmo-Chr2:4288488 2.30E-76 transposed
Cmo02g00676 Cmo-Chr2:4288488 Cmo20g00315 Cmo-Chr20:1543724 5.09E-15 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00676 K00430 - csv:101204209 566.229