Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00689 ATGAAGCTCTGTTCAGCATCAGTGCTTTCTCTCGTTTTGATTATTGTTAATCTACTTCACCTTGCCATTGCCGACCTGAACTCAGACAAGCAGGCTCTTCTCGATTTTGTATCGTCTGTTCCACATCGTCGGAACCTTAACTGGAACGATAATACATCAGTATGCACTACTTGGGTTGGCATTACTTGTAATGCAGATGGAACCCGTGTGCTTACCCTCCGACTTCCTGGGATTGGACTGATTGGTTCAATTCCTCCTAACACTCTAGGGAAACTCGATGGTCTTAAGATTCTCAGTCTTCGTTCCAACCTCCTTAACGGAAAAATACCGTTCGATATTTCCTCACTTCCTTCTCTCCAATATCTTTATCTCCAGCATAATAACTTCTCTGGTGACTTCCCTTCATCCTTTTCACCAACACTCAATGTATTGGATCTATCATTCAATTCACTCGAAGGAACGATTTCGAAAACTATCCAAAATTTGACACGGCTAATTGGATTGAACGTCGGGAACAACAATCTTTCTGGTTCTATACCAGATATCAACCTCCCTAAGCTCAAGCATTTCGATGTAAGCTATAACCATCTTAATGGTTCCATACCGACTTTTTTTAGGACATTCCCGGACTCATCCTTCATTGGAAATCCTTTATTATGTGGATTGCCTCTAAAATCTTGCTCCATAGACCTATCTCCAGCACCTGCCATTTCTCCAAAGCAGAAAAGACTGACGATGGGAGTTATCATAGCTATTGCAGTTGGTGGATTTTTGGTTCTGTTCCTTGTAGTTCTTTTCGTGATCGTGTGCTGTTTAAAGAGAAAGGACGGCGAAGGCACTGGAACGATAAAGGGGAAAGTTTCTGGTGGTGGGAGAAGCGAAAAACCGAAAGAGGAGTTCGGAAGTGGCGTGCAGGAGGCTGAGAAAAACAAGCTGGTGTTCTTTGAAGGTTGTTCATTTAACTTTGATCTTGAAGACCTATTAAGGGCTTCAGCTGAAGTGCTTGGAAAGGGCAGCTATGGAACAGCTTATAAAGCTGTCTTGGAGGAACCTACCACTGTTGTGGTGAAAAGATTGAAGGAAGTGGTGGTGGGGAAGAGGGAGTTTGAACAACAGATGGACACGGTCGGCAGGGTGGGGCAGCACCCGAACGTCATGCCACTCCGAGCATATTATTACTCGAAAGATGAAAAGCTCCTTGTTTATGATTATGTCCCCGGAGGCAGCTTGTCGTCACTTTTGCATGGAAACAGAGGGGGGGAAAGAACACCAGTTGACTGGGACACAAGACTCAAAATTGCTCTTACAGCAGCAAAGGGCATTGCTCATATTCATACAATGGGTGGTCCAAAGTTCACCCATGGAAACATCAAGGCCTCAAATATTCTCCTAAACCAAGATCTCAATGCTTCTGTCTCTGACTTTGGCCTTACCCCTCTTATGAATGTCCCAACTTCTCGAACTGCAGGTTATCGTGCACCCGAGGTGATCGAAGCTCGTAAACACACTCACAAGTCAGATGTTTACAGCTTTGGTGTTCTTCTTCTCGAAATGCTAACTGGAAAAGCTCCCCTCCAATCACCTGGTCGTGACGAAATGGTCGATCTTCCTCGCTGGGTTCAATCGGTCGTGAGGGAGGAATGGACAGCTGAGGTTTTCGATGTTGAGCTAATGAGGTACCAGAATATAGAAGAAGAAATGGTGCAGATGTTGCAAATAGCAATGACTTGTGTAGCGAAGCTGCCCGACATGAGACCGAACATGGACGAAGTCGTTAGAATGATCGAAGAAATACGGCAATCCGACTCGGAGAACCAGCCGTCCTCCGAAGAGAACAAATCCAAGGACTCAAATGTGCAGACCCCATGA 1869 45.05 MKLCSASVLSLVLIIVNLLHLAIADLNSDKQALLDFVSSVPHRRNLNWNDNTSVCTTWVGITCNADGTRVLTLRLPGIGLIGSIPPNTLGKLDGLKILSLRSNLLNGKIPFDISSLPSLQYLYLQHNNFSGDFPSSFSPTLNVLDLSFNSLEGTISKTIQNLTRLIGLNVGNNNLSGSIPDINLPKLKHFDVSYNHLNGSIPTFFRTFPDSSFIGNPLLCGLPLKSCSIDLSPAPAISPKQKRLTMGVIIAIAVGGFLVLFLVVLFVIVCCLKRKDGEGTGTIKGKVSGGGRSEKPKEEFGSGVQEAEKNKLVFFEGCSFNFDLEDLLRASAEVLGKGSYGTAYKAVLEEPTTVVVKRLKEVVVGKREFEQQMDTVGRVGQHPNVMPLRAYYYSKDEKLLVYDYVPGGSLSSLLHGNRGGERTPVDWDTRLKIALTAAKGIAHIHTMGGPKFTHGNIKASNILLNQDLNASVSDFGLTPLMNVPTSRTAGYRAPEVIEARKHTHKSDVYSFGVLLLEMLTGKAPLQSPGRDEMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMTCVAKLPDMRPNMDEVVRMIEEIRQSDSENQPSSEENKSKDSNVQTP 622
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4354239 4357270 - CmoCh02G006890.1 Cmo02g00689 376286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00689 622 PANTHER OS05G0588300 PROTEIN 9 622 - -
Cmo02g00689 622 PANTHER OS05G0588300 PROTEIN 3 622 - -
Cmo02g00689 622 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Cmo02g00689 622 MobiDBLite consensus disorder prediction 598 622 - -
Cmo02g00689 622 ProSitePatterns Protein kinases ATP-binding region signature. 335 366 IPR017441 GO:0005524
Cmo02g00689 622 CDD STKc_IRAK 335 598 - -
Cmo02g00689 622 ProSiteProfiles Protein kinase domain profile. 329 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g00689 622 Gene3D Phosphorylase Kinase; domain 1 297 404 - -
Cmo02g00689 622 Gene3D Ribonuclease Inhibitor 26 182 IPR032675 -
Cmo02g00689 622 PANTHER LRR RECEPTOR-LIKE KINASE 3 622 - -
Cmo02g00689 622 SUPERFAMILY Protein kinase-like (PK-like) 333 596 IPR011009 -
Cmo02g00689 622 SUPERFAMILY L domain-like 39 226 - -
Cmo02g00689 622 Gene3D Transferase(Phosphotransferase) domain 1 405 621 - -
Cmo02g00689 622 Pfam Leucine rich repeat 81 129 IPR001611 GO:0005515
Cmo02g00689 622 Pfam Protein kinase domain 332 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g00689 622 MobiDBLite consensus disorder prediction 282 303 - -
Cmo02g00689 622 PANTHER RECEPTOR-LIKE KINASE 9 622 - -
Cmo02g00689 622 Gene3D Ribonuclease Inhibitor 184 227 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00689 Cmo-Chr2:4354239 Cmo07g01252 Cmo-Chr7:6859505 0 dispersed
Cmo01g00778 Cmo-Chr1:4050900 Cmo02g00689 Cmo-Chr2:4354239 1.57E-164 wgd
Cmo02g00689 Cmo-Chr2:4354239 Cmo20g00327 Cmo-Chr20:1600161 0 wgd
Cmo02g00689 Cmo-Chr2:4354239 Cmo03g00295 Cmo-Chr3:4176895 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74103 PF00069 Pkinase 3.60E-37 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00689 - - csv:101221378 1054.28