Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00704 ATGCCGGAGATCGAACCCTACTCCGCCGGCAATAATGCCCTGTTTGGCAAGTACGAGCTCGGCAAGCTCCTCGGCTGCGGCGCCTTTGCCAAGGTCTACCATGCCCGCGACCTTCGCTCCGGCCAGAGCGTCGCCGTCAAAGTCATCAATAAGAAGAAGATCTATGGCACAACGCTAATGTCTAACATCAAGAGGGAGATCGATATCATGCGCCGTCTTCGCCATCCACACATCGTCAAACTCCATGAGGTTCTCGCTACCAAATCCAAGATCTACTTTGTTATGGAATTCGTCAAAGGAGGTGAGCTCTTTGCCAAGGTTGCTAAGGGCCGATTCAGCGAGGATTTGAGCAGGAAATTCTTCCAGCAATTGATTTCTGCTGTCGGATTTTGTCACGCGCGTGGGATCTACCACCGCGATCTGAAGCCGGAGAATCTCCTCGTCGACGAGAATGGAAATCTCAAGGTCTCGGACTTCGGACTCAGTGCGTTAACGGACCAGATCCGCTCCGATGGCCTTTTGCACACACTCTGTGGAACTCCGGCGTATGTCGCGCCGGAGATCTTGTCGAAGAAGGGATACGACGGTGCTAAAGTCGATGTGTGGTCCTGTGGTGTGATTCTTTTCGTGTTGAGTGCTGGTTACCTTCCGTTCAATGATCCGAATCTCATGGCCATGTACAAGAAGATTTACAAGGGAGAATATCGGTGCCCTAAATGGATGTCGCCGGACCTCAAGAGATTTCTATCGCGACTTCTCGACACGAATCCTCAAACTAGAATCACCGTCGATGAGATTCTCAGCGATCCGTGGTTCAAAAAAGGACCAATTAAGGAGATCAATTTCTACGATGATTACGAGATGAAATATGAAGAGAAGGACGAATCTGAATCGAAGAATTTGAACGCATTCGACCTTATATCATTCTCATCTGGATTAGATCTCTCCGGTTTGTTCGACAATTCGCACAACACAGAGGCGGACAGTGAGCGATTCGTATCAGCAGAGTCTCCAGAGAAGATCGTGGAGAAAATCGAAGAACTCGCTAGGGCAGAGAATTTGAAGGTGAAGAAACAAAAGGAATTTGGAGTTGAATTGGATGGGCAGAATCGTAATTTATCAATCGGAATCGAAATTTTCCGGTTAACCGACGGATTGGTAGTGGTGGAGGCGAGAAGAAGAAGTGGAGATGCAGAATCGTGTAAGGAATTGTTGAAGAAGAAGCTCAAATGTCACCTCACCGGCAACGAAGCGTCGACGTCAACATCACAACAAGATTCCGGCGACCAAAACCAGTGA 1299 48.58 MPEIEPYSAGNNALFGKYELGKLLGCGAFAKVYHARDLRSGQSVAVKVINKKKIYGTTLMSNIKREIDIMRRLRHPHIVKLHEVLATKSKIYFVMEFVKGGELFAKVAKGRFSEDLSRKFFQQLISAVGFCHARGIYHRDLKPENLLVDENGNLKVSDFGLSALTDQIRSDGLLHTLCGTPAYVAPEILSKKGYDGAKVDVWSCGVILFVLSAGYLPFNDPNLMAMYKKIYKGEYRCPKWMSPDLKRFLSRLLDTNPQTRITVDEILSDPWFKKGPIKEINFYDDYEMKYEEKDESESKNLNAFDLISFSSGLDLSGLFDNSHNTEADSERFVSAESPEKIVEKIEELARAENLKVKKQKEFGVELDGQNRNLSIGIEIFRLTDGLVVVEARRRSGDAESCKELLKKKLKCHLTGNEASTSTSQQDSGDQNQ 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4428434 4429732 + CmoCh02G007040.1 Cmo02g00704 376301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00704 432 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g00704 432 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g00704 432 Pfam NAF domain 299 358 IPR004041 GO:0007165
Cmo02g00704 432 ProSiteProfiles NAF domain profile. 296 320 IPR018451 GO:0007165
Cmo02g00704 432 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g00704 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Cmo02g00704 432 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Cmo02g00704 432 Gene3D Transferase(Phosphotransferase) domain 1 100 276 - -
Cmo02g00704 432 SUPERFAMILY Protein kinase-like (PK-like) 15 280 IPR011009 -
Cmo02g00704 432 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 8 422 - -
Cmo02g00704 432 Gene3D Kinase associated domain 1, KA1 297 415 - -
Cmo02g00704 432 Coils Coil 341 361 - -
Cmo02g00704 432 CDD CIPK_C 302 399 - -
Cmo02g00704 432 Gene3D Phosphorylase Kinase; domain 1 15 99 - -
Cmo02g00704 432 PANTHER - 8 422 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00704 Cmo20g00338 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00704 Cmo-Chr2:4428434 Cmo07g01270 Cmo-Chr7:6968245 0 dispersed
Cmo14g01806 Cmo-Chr14:13824099 Cmo02g00704 Cmo-Chr2:4428434 2.35E-124 dispersed
Cmo02g00704 Cmo-Chr2:4428434 Cmo20g00338 Cmo-Chr20:1665343 0 wgd
Cmo02g00704 Cmo-Chr2:4428434 Cmo03g00313 Cmo-Chr3:4316184 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74105 PF00069 Pkinase 1.90E-72 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00704 - K12761 csv:101204001 701.434