Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00708 ATGGCTATGGCTTTAGCAACCGTCTTATTGGCAATGTTGCTCGTGGGAAACTCCTCCGCTCAGCTCTCCCCGAACTTCTACTACACCACGTGCCCCAAGCTCCTCGGCATTGTTAGAGCTGGTGTTCAGTCTGCTGTCGCTAAGGAAGCTCGCATGGGCGCTTCTCTTCTCCGTCTCCACTTTCACGACTGTTTTGTTAATGGTTGTGATGGATCTATTCTTCTCGAAGATACTCCTACTTTTACTGGAGAGCAAACTGCAGCTCCCAATGTTAGATCCGTTAGAGGGTTCGATGTGATTGAGAGTATAAAGAAGAATGTCGAAAAAGTTTGTCCTGGTGTTGTCTCTTGTGCTGATATTTTGACTCTTTCTGCTCGGGACTCCGTTGTAGTACTTGGAGGACCGAGTTGGGTGGTGAAATTAGGAAGGAGAGATTCCCAAACAGCTAGCTTCTCTGATGTCGTTGGTGCCATTCCTCCGCCAACCTCTACACTCGACAGCCTTATCGACCGGTTCAACACTAAAGGCCTTTCCCCTCGAGATTTGGTTGCCTTATCTGGGGCTCACACAATCGGGCAAGCAAAGTGTTTGTTTTTCAAGAACCGTATATACAACGAGACCAACATTGATGAATCCTTCGCTAAGGAGAGACAGAGGAATTGCCCAGTAAATGGAGGAGACGATAACCGTGCTCCTCTAGACTTCGAAACTCCAAATCTCTTTGACAACTACTACTACAAGAACCTTCTAGATCAAAAGGCTCTACTCCGTTCCGATCAAGTGTTGCATGATGGTGGATCCACTGATTCCTTAGTTGAACTCTACAGTGACGACAGTGATGCCTTTGAAGCTGACTTTGTGACAGCTATGATCAAGATGGGCAACATTGAACCACTCACAGGATCACAAGGCGAGATTCGAAGCGTCTGCAGCCGACCCAATTAA 945 47.2 MAMALATVLLAMLLVGNSSAQLSPNFYYTTCPKLLGIVRAGVQSAVAKEARMGASLLRLHFHDCFVNGCDGSILLEDTPTFTGEQTAAPNVRSVRGFDVIESIKKNVEKVCPGVVSCADILTLSARDSVVVLGGPSWVVKLGRRDSQTASFSDVVGAIPPPTSTLDSLIDRFNTKGLSPRDLVALSGAHTIGQAKCLFFKNRIYNETNIDESFAKERQRNCPVNGGDDNRAPLDFETPNLFDNYYYKNLLDQKALLRSDQVLHDGGSTDSLVELYSDDSDAFEADFVTAMIKMGNIEPLTGSQGEIRSVCSRPN 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4439498 4440694 - CmoCh02G007080.1 Cmo02g00708 376305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00708 314 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00708 314 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00708 314 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00708 314 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00708 314 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00708 314 Gene3D - 25 311 - -
Cmo02g00708 314 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Cmo02g00708 314 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00708 314 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00708 314 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00708 314 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00708 314 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00708 314 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00708 314 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00708 314 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00708 314 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g00708 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Cmo02g00708 314 ProSiteProfiles Plant heme peroxidase family profile. 21 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00708 314 Pfam Peroxidase 38 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g00708 314 CDD secretory_peroxidase 21 312 IPR033905 GO:0004601|GO:0042744
Cmo02g00708 314 Gene3D Peroxidase, domain 2 159 293 - -
Cmo02g00708 314 PANTHER PEROXIDASE 3 311 - -
Cmo02g00708 314 SUPERFAMILY Heme-dependent peroxidases 21 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo02g00708 314 PANTHER PEROXIDASE 72-RELATED 3 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g00748 Cmo02g00708 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00708 Cmo-Chr2:4439498 Cmo20g00343 Cmo-Chr20:1681636 0 dispersed
Cmo01g00746 Cmo-Chr1:3874647 Cmo02g00708 Cmo-Chr2:4439498 1.87E-123 wgd
Cmo02g00708 Cmo-Chr2:4439498 Cmo20g00342 Cmo-Chr20:1675436 5.24E-172 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00708 K00430 - csv:101204245 559.681