Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo02g00708 | ATGGCTATGGCTTTAGCAACCGTCTTATTGGCAATGTTGCTCGTGGGAAACTCCTCCGCTCAGCTCTCCCCGAACTTCTACTACACCACGTGCCCCAAGCTCCTCGGCATTGTTAGAGCTGGTGTTCAGTCTGCTGTCGCTAAGGAAGCTCGCATGGGCGCTTCTCTTCTCCGTCTCCACTTTCACGACTGTTTTGTTAATGGTTGTGATGGATCTATTCTTCTCGAAGATACTCCTACTTTTACTGGAGAGCAAACTGCAGCTCCCAATGTTAGATCCGTTAGAGGGTTCGATGTGATTGAGAGTATAAAGAAGAATGTCGAAAAAGTTTGTCCTGGTGTTGTCTCTTGTGCTGATATTTTGACTCTTTCTGCTCGGGACTCCGTTGTAGTACTTGGAGGACCGAGTTGGGTGGTGAAATTAGGAAGGAGAGATTCCCAAACAGCTAGCTTCTCTGATGTCGTTGGTGCCATTCCTCCGCCAACCTCTACACTCGACAGCCTTATCGACCGGTTCAACACTAAAGGCCTTTCCCCTCGAGATTTGGTTGCCTTATCTGGGGCTCACACAATCGGGCAAGCAAAGTGTTTGTTTTTCAAGAACCGTATATACAACGAGACCAACATTGATGAATCCTTCGCTAAGGAGAGACAGAGGAATTGCCCAGTAAATGGAGGAGACGATAACCGTGCTCCTCTAGACTTCGAAACTCCAAATCTCTTTGACAACTACTACTACAAGAACCTTCTAGATCAAAAGGCTCTACTCCGTTCCGATCAAGTGTTGCATGATGGTGGATCCACTGATTCCTTAGTTGAACTCTACAGTGACGACAGTGATGCCTTTGAAGCTGACTTTGTGACAGCTATGATCAAGATGGGCAACATTGAACCACTCACAGGATCACAAGGCGAGATTCGAAGCGTCTGCAGCCGACCCAATTAA | 945 | 47.2 | MAMALATVLLAMLLVGNSSAQLSPNFYYTTCPKLLGIVRAGVQSAVAKEARMGASLLRLHFHDCFVNGCDGSILLEDTPTFTGEQTAAPNVRSVRGFDVIESIKKNVEKVCPGVVSCADILTLSARDSVVVLGGPSWVVKLGRRDSQTASFSDVVGAIPPPTSTLDSLIDRFNTKGLSPRDLVALSGAHTIGQAKCLFFKNRIYNETNIDESFAKERQRNCPVNGGDDNRAPLDFETPNLFDNYYYKNLLDQKALLRSDQVLHDGGSTDSLVELYSDDSDAFEADFVTAMIKMGNIEPLTGSQGEIRSVCSRPN | 314 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4439498 | 4440694 | - | CmoCh02G007080.1 | Cmo02g00708 | 376305 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo02g00708 | 314 | PRINTS | Haem peroxidase superfamily signature | 115 | 132 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00708 | 314 | PRINTS | Haem peroxidase superfamily signature | 133 | 145 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00708 | 314 | PRINTS | Haem peroxidase superfamily signature | 234 | 249 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00708 | 314 | PRINTS | Haem peroxidase superfamily signature | 53 | 67 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00708 | 314 | PRINTS | Haem peroxidase superfamily signature | 181 | 196 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00708 | 314 | Gene3D | - | 25 | 311 | - | - | |
Cmo02g00708 | 314 | ProSitePatterns | Peroxidases active site signature. | 53 | 64 | IPR019794 | GO:0004601 | |
Cmo02g00708 | 314 | PRINTS | Plant peroxidase signature | 288 | 301 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00708 | 314 | PRINTS | Plant peroxidase signature | 95 | 108 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00708 | 314 | PRINTS | Plant peroxidase signature | 232 | 247 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00708 | 314 | PRINTS | Plant peroxidase signature | 55 | 75 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00708 | 314 | PRINTS | Plant peroxidase signature | 180 | 192 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00708 | 314 | PRINTS | Plant peroxidase signature | 133 | 148 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00708 | 314 | PRINTS | Plant peroxidase signature | 114 | 124 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00708 | 314 | PRINTS | Plant peroxidase signature | 31 | 50 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00708 | 314 | PRINTS | Plant peroxidase signature | 248 | 265 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00708 | 314 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 181 | 191 | IPR019793 | - | |
Cmo02g00708 | 314 | ProSiteProfiles | Plant heme peroxidase family profile. | 21 | 314 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00708 | 314 | Pfam | Peroxidase | 38 | 278 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00708 | 314 | CDD | secretory_peroxidase | 21 | 312 | IPR033905 | GO:0004601|GO:0042744 | |
Cmo02g00708 | 314 | Gene3D | Peroxidase, domain 2 | 159 | 293 | - | - | |
Cmo02g00708 | 314 | PANTHER | PEROXIDASE | 3 | 311 | - | - | |
Cmo02g00708 | 314 | SUPERFAMILY | Heme-dependent peroxidases | 21 | 314 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g00708 | 314 | PANTHER | PEROXIDASE 72-RELATED | 3 | 311 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo01g00748 | Cmo02g00708 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00708 | Cmo-Chr2:4439498 | Cmo20g00343 | Cmo-Chr20:1681636 | 0 | dispersed | |
Cmo01g00746 | Cmo-Chr1:3874647 | Cmo02g00708 | Cmo-Chr2:4439498 | 1.87E-123 | wgd | |
Cmo02g00708 | Cmo-Chr2:4439498 | Cmo20g00342 | Cmo-Chr20:1675436 | 5.24E-172 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo02g00708 | K00430 | - | csv:101204245 | 559.681 |