Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00725 ATGGCTACCGAGGCGACTGAAGCTACGACTAAGTTTCAGAGTCCGGGTTTTCGCCCGGTACCGTCGCCTCCGGATTTCCATCCCGAAATTATTGTCTCAACCCATGATGGTCTCCGGTTCTGGCAGTTCATGATTGCCGGTTCAGTCGCGGGGTCTGTGGAGCATATGGCTATGTTTCCGGTTGATACCGTCAAGACCCATATGCAAGCCCTTGGTTCTTGTCCGATTAAATCTGTTGGAGTTCGACAAGCCCTTCGGTCAATTTTGAAGTCAGAGGGACCTGCTGGTTTTTATCGTGGTATTGGTGCTATGGGCCTCGGAGCTGGTCCTGCACATGCTGTGTATTTTACGGTTTACGAGAATTGTAAAAGGGTTTTCTCTGGTGGGGATCCTAATAATTCAGTAGCCCACGCTGCGTCTGGTGTCTGTGCGACGGTGGTGAGTGATGCTGTCTTTACACCGATGGACATGGTTAAACAGAGGCTGCAGCTGAGTAATAGTCCTTACGAGGGAGTTTTGGATTGTGTCAAAAGGGTCCTAAGAGACGAGGGTTTTAAAGCATTTTACGCTTCATATAGAATTACAGTGTTAATGAATGCTCCATTTACTGCTGTGCATTTTGCAACTTATGAAGCTGCAAAGAGAGGTTTAATGGAGGTTTCGCCAGAGAGTGCTAATGATGAACAGTGGATTGCTCACGCGACAGCAGGAGCTGCTGCTGGAGCTTTAGCTGCACTTGTTACAACGCCGCTTGATGTGGTTAAGACTCAATTACAATGTCAGGGTGTATGTGGATGCGATAGATTCAAAAGTGGGTCGATTGGGGACGTGATTCGAACAATACTGAAGAAGGATGGATATGGAGGGCTTATGAGGGGATGGGTTCCAAGGATGCTGTTCCATACGCCCGCTGCAGCCATTTGCTGGTCGACATACGAAGCAATAAAATCGTTCTTCCAAGACCTCAACAGCAGCAGCAGCGACAATGTAACCTGA 996 48.19 MATEATEATTKFQSPGFRPVPSPPDFHPEIIVSTHDGLRFWQFMIAGSVAGSVEHMAMFPVDTVKTHMQALGSCPIKSVGVRQALRSILKSEGPAGFYRGIGAMGLGAGPAHAVYFTVYENCKRVFSGGDPNNSVAHAASGVCATVVSDAVFTPMDMVKQRLQLSNSPYEGVLDCVKRVLRDEGFKAFYASYRITVLMNAPFTAVHFATYEAAKRGLMEVSPESANDEQWIAHATAGAAAGALAALVTTPLDVVKTQLQCQGVCGCDRFKSGSIGDVIRTILKKDGYGGLMRGWVPRMLFHTPAAAICWSTYEAIKSFFQDLNSSSSDNVT 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4581054 4584659 - CmoCh02G007250.1 Cmo02g00725 376322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00725 331 PANTHER MITOFERRIN-1-RELATED 5 326 - -
Cmo02g00725 331 Gene3D Mitochondrial carrier domain 168 331 IPR023395 -
Cmo02g00725 331 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 5 326 - -
Cmo02g00725 331 PRINTS Mitochondrial carrier protein signature 43 56 IPR002067 GO:0055085
Cmo02g00725 331 PRINTS Mitochondrial carrier protein signature 56 70 IPR002067 GO:0055085
Cmo02g00725 331 PRINTS Mitochondrial carrier protein signature 147 165 IPR002067 GO:0055085
Cmo02g00725 331 PRINTS Mitochondrial carrier protein signature 189 207 IPR002067 GO:0055085
Cmo02g00725 331 PRINTS Mitochondrial carrier protein signature 237 259 IPR002067 GO:0055085
Cmo02g00725 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 228 318 IPR018108 -
Cmo02g00725 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 216 IPR018108 -
Cmo02g00725 331 SUPERFAMILY Mitochondrial carrier 36 314 IPR023395 -
Cmo02g00725 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 38 125 IPR018108 -
Cmo02g00725 331 Gene3D Mitochondrial carrier domain 26 167 IPR023395 -
Cmo02g00725 331 Pfam Mitochondrial carrier protein 133 219 IPR018108 -
Cmo02g00725 331 Pfam Mitochondrial carrier protein 228 321 IPR018108 -
Cmo02g00725 331 Pfam Mitochondrial carrier protein 38 127 IPR018108 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00725 Cmo20g00352 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00725 Cmo-Chr2:4581054 Cmo07g01125 Cmo-Chr7:5926574 1.28E-141 dispersed
Cmo02g00725 Cmo-Chr2:4581054 Cmo20g00352 Cmo-Chr20:1733791 0 wgd
Cmo02g00725 Cmo-Chr2:4581054 Cmo03g00342 Cmo-Chr3:4487298 2.71E-15 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00725 K15113 - csv:101215924 610.527