Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00760 ATGGCGCCAACAGCCACCGGATCCTTCTGCAACAAATTCCTTGCACTTTTACTTCTAATTCTCCACGTCGGCTGCTTTCTTTTAACCAATGGTGACAACCGCCGCCGCCGCCACCGTCCCCTGCAGCCGAAGAAGCGTAATGAATCTCCTCCGACGGCGTTGAGTCTGAAGCCGCAAAAAGCCCTAACCTCATCCATTTCATTTCTCAAACGAATTTTTTCTTCCAAAACGTGCAAAATGGCAATCGAGACGGCTCGTCCTCCCTCGACTCCGGCTCGATCGTCGCAGCATTCGATCGTCACGCTTATTCCTCAGCCGGTGGATACTCCGAACTCCAAGAACGCTAATCCGATCGATTCTGCTGGAACGCCACAGGATTCCGATATCACTACGGCGGAGATCAACCAATTTTTCCCCCTTCGTAACGATATCTTCCCCTGCACTGCTTGCGGCGAGATTTTCCCCAAGCCTCAATTGCTCGAACAGCACCAAGCGGCTAAACACGCCGTGTCGGAGCTTGCAGACTCGGATTCCGGTAAGAATATTGTTCGGATCATTTTCGAAACCGGATGGACGAGTAGAGAAAAAAGCCCGAAGATCATCCGAATCTTGAAAGTCCACAACAGTCAAAAGATTCTCTCCAGATTCGAGGAATATAGAGAGTCGGTGAAGGCTAAAGCGGCCCGAAACGGCGGCGCTGTAAAGCGATGGGATGAACGGTGCATCGCCGATGGGAACGAGCTTCTGAGATTTCACTGTTCGACGTTTTTGTGCGATTTGGGGCAAAACGGTAATTCCAGCATCTGCGGGCAGCAATTTTGTAGTATTTGTGGGATAATCAAATCGGGATTCTCACACAAGTTGGATGGAATTTCTACGCTATCGAGTAGCTGGAGAGCACACGTGGCAATCCCTGAGGACATCGAAGAGGAGTTCAAGTTCATGAACGTGAAACGGGCGATTCTGGTTTGCCGGGTCGTGGCCGGCCGGATCGGGTCCGACAACGACGAGCCGGAGAAAGACGGCGGCGGGTTTGACTCCGTAGTCGGCCGAAGTGGGAGTGGGGCCCAAACGACGGTGGATGAAGAAGAGATGTTGGTTTTCAATCCGAGGGCTGTGCTCCCCTGCTTCGCGATTGTGTACGAAGTCTGA 1152 52.17 MAPTATGSFCNKFLALLLLILHVGCFLLTNGDNRRRRHRPLQPKKRNESPPTALSLKPQKALTSSISFLKRIFSSKTCKMAIETARPPSTPARSSQHSIVTLIPQPVDTPNSKNANPIDSAGTPQDSDITTAEINQFFPLRNDIFPCTACGEIFPKPQLLEQHQAAKHAVSELADSDSGKNIVRIIFETGWTSREKSPKIIRILKVHNSQKILSRFEEYRESVKAKAARNGGAVKRWDERCIADGNELLRFHCSTFLCDLGQNGNSSICGQQFCSICGIIKSGFSHKLDGISTLSSSWRAHVAIPEDIEEEFKFMNVKRAILVCRVVAGRIGSDNDEPEKDGGGFDSVVGRSGSGAQTTVDEEEMLVFNPRAVLPCFAIVYEV 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4756462 4757613 - CmoCh02G007600.1 Cmo02g00760 376357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00760 383 PANTHER NUCLEIC ACID BINDING PROTEIN 5 381 - -
Cmo02g00760 383 Gene3D - 170 382 - -
Cmo02g00760 383 SUPERFAMILY ADP-ribosylation 171 382 - -
Cmo02g00760 383 MobiDBLite consensus disorder prediction 335 355 - -
Cmo02g00760 383 ProSitePatterns Zinc finger C2H2 type domain signature. 147 168 IPR013087 -
Cmo02g00760 383 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 5 381 - -
Cmo02g00760 383 MobiDBLite consensus disorder prediction 34 59 - -
Cmo02g00760 383 ProSiteProfiles Zinc finger C2H2 type domain profile. 145 173 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00760 Cmo-Chr2:4756462 Cmo09g00104 Cmo-Chr9:494843 7.46E-65 dispersed
Cmo02g00760 Cmo-Chr2:4756462 Cmo20g00383 Cmo-Chr20:1870489 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
9248 None None None None Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00760 - - csv:101205506 593.964