Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00805 ATGGGTAACGGGATTGGGAAGCTCGGCGTTTGCTTCACCGGAATCAACGACGGTAGGCGGCGGCCGGATATTTCTGCTCTGTTATCGAATCCACTCGATGAAGGGCTTGGACACTCGTTCTGCTATGTCCGGCCGGATCCTTTGAGGCTGTCGTCTTCAAAAGTTCATTCCGATGAAACCACCACTTTCCGATCAATTTCCGGCGCCTCTGTAAGTGCCAATACATCGACGCCTCTTTCTACGGCCCTTGTTGATCTGTATTCGTACAATAGCATTGATCGAGCGGCGGCTTTTGAGAGTTCGACTTCTTTCGCTTCAATTCCTTTGCAGCCGATCCCTAAAAACATGATCAATTCGGGTCCGATTCCGGGTAATTTCAGTGGAATCCCTAGTTCGGGTCCTTTGGAAAGAGGGTTTTTATCGGGTCCAATTGAACGAGGGTTTATGTCGGGTCCATTGGATCGGGGGATTTTTTCGGGTCCTCTTGATAATTCTACACCTTGCGAATTTCAGAGAAGTTTCTCTCATGGTGGAGGATTTAATTCCAGATCTGGATCGAGAAAAGGCCGGCTAATTCGGATTTTGAGAAGCGTAATTTCGAAGTCGATTTATCGAGGGCAAAATTCCATTGTGGCTCCGATTAAAGCGGTTAAAGAACCCGATTGGATCGTCATGCCCGAGAAACATAATGAGAATTTGACTGTAAGTAGTTTAAATTTCAGTAGTGAGGGAAGTTTGGAAGACGATGATTCAATGGAGAGCCAAAATCTGCAGTGGGCTCAAGGAAAAGCAGGGGAAGATCGTGTTCATGTGGTGGTTTCGGAAGAACATGGTTGGGTTTTCGTCGGGATTTACGATGGATTTAACGGTCCTGATGCTCCTGATTACCTTTTATCGAATCTATACTCCTTTGTTCATAAGGAACTTAAAGGTTTGTTATGGGACGAAAAGCTCGATTCCGCCGGAGTTGCCGCTCCGGCCACTTCCCCTGTTCGATCTGAGAATCATCCTTGTCCAGAAACAAGAGATTGTTCGCAGGTTAACGCTTGTTCTCAGTGTGTTGAACAAGAGAATCATCCTTGTGCTAGTGGCGATGCGAATTCTGGATCGAATTCGAGGAGAAAAAAAGGTAAGAATTCAAGAGGAAAGTTTAAAGGAGCTTCTGAGAAATGGGAGGATAATCAGCGGAAATGGAAGTGCGAATGGGATCAGGAGCGATTAGAGCTCGATCGGAGGTTAAAGGAGCAGTTGAATCGATCTGCGTCGTCAAATGGTTCGAGGTCGATTAATCATTCGGATGTTTTGAAAGCTTTGTCCCAGGCATTGAAGAAAACAGAGGAAGCCTACTTGGATATTGCAGACAAGATGCTCGATGAAAATCCTGAACTGGCTTTGATGGGTTCTTGTGTGCTTGTGATGCTTATGAAGGGAGATGATGTTTATGTGATGAACGTTGGCGATAGCCGAGCTGTTTTAGCGCAGAAGGCGGAGCCCGATTATTGGCTCGGGAAGATTCAACAGGATTTGGAGAGGATTAATGAAGAGCCAGTTCATGACATTGAAGCATTAGATGGAGATAGAGCATTCACATCAGCTAACCTTACTGCTTTTCAGCTTTCCATGGATCATAGCACCAGTGTTGATGAGGAAGTTCAGAGAATAAAAAATGAACATCCTGATGATGCTGGTGCCGTGATGAACGACCGTGTGAAAGGCTCGTTGAAGGTTACTCGGGCGTTCGGTGCTGGGTTCCTCAAACAGCCTAAATGGAACAATGCACTGTTGGAAATGTTCAGAATCAACTACGTCGGGGGATCGCCATACATCAATTGTCTTCCATCTCTCTACCACCACAGATTGGGACCAAAAGACAGGTTTTTGATACTATCATCTGATGGACTCTACCAGTACTTCACAAACGAGGAAGCTGTTTCGGAAGTCGAACTTTTCATCGCCTTGCAACCCGAAGGAGACCCGGCACAACATCTGGTTGAACTACTGCTGTTTCGGGCTGCAAAGAGAGCTGGTATGGATTTCCACGAGTTACTCAAAATACCACAGGGCGATCGGAGGAAGTACCACGACGATGTATCGATCATTGTAATTTCATTAGAAGGGAGGATCTGGAGATCCTGTGTATAA 2142 45.94 MGNGIGKLGVCFTGINDGRRRPDISALLSNPLDEGLGHSFCYVRPDPLRLSSSKVHSDETTTFRSISGASVSANTSTPLSTALVDLYSYNSIDRAAAFESSTSFASIPLQPIPKNMINSGPIPGNFSGIPSSGPLERGFLSGPIERGFMSGPLDRGIFSGPLDNSTPCEFQRSFSHGGGFNSRSGSRKGRLIRILRSVISKSIYRGQNSIVAPIKAVKEPDWIVMPEKHNENLTVSSLNFSSEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYSFVHKELKGLLWDEKLDSAGVAAPATSPVRSENHPCPETRDCSQVNACSQCVEQENHPCASGDANSGSNSRRKKGKNSRGKFKGASEKWEDNQRKWKCEWDQERLELDRRLKEQLNRSASSNGSRSINHSDVLKALSQALKKTEEAYLDIADKMLDENPELALMGSCVLVMLMKGDDVYVMNVGDSRAVLAQKAEPDYWLGKIQQDLERINEEPVHDIEALDGDRAFTSANLTAFQLSMDHSTSVDEEVQRIKNEHPDDAGAVMNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRINYVGGSPYINCLPSLYHHRLGPKDRFLILSSDGLYQYFTNEEAVSEVELFIALQPEGDPAQHLVELLLFRAAKRAGMDFHELLKIPQGDRRKYHDDVSIIVISLEGRIWRSCV 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4953061 4956207 + CmoCh02G008050.1 Cmo02g00805 376402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00805 713 Coils Coil 435 455 - -
Cmo02g00805 713 MobiDBLite consensus disorder prediction 358 388 - -
Cmo02g00805 713 SMART PP2C_4 250 702 IPR001932 -
Cmo02g00805 713 PANTHER - 12 713 - -
Cmo02g00805 713 CDD PP2Cc 409 704 IPR001932 -
Cmo02g00805 713 ProSiteProfiles PPM-type phosphatase domain profile. 249 704 IPR001932 -
Cmo02g00805 713 SUPERFAMILY PP2C-like 263 705 IPR036457 -
Cmo02g00805 713 Pfam Protein phosphatase 2C 414 653 IPR001932 -
Cmo02g00805 713 PANTHER PROTEIN PHOSPHATASE 2C 12 713 IPR015655 GO:0004722|GO:0006470
Cmo02g00805 713 Gene3D - 226 709 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00805 Cmo20g00446 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00805 Cmo-Chr2:4953061 Cmo03g00439 Cmo-Chr3:4997810 0 dispersed
Cmo02g00805 Cmo-Chr2:4953061 Cmo20g00446 Cmo-Chr20:2072912 0 wgd
Cmo02g00805 Cmo-Chr2:4953061 Cmo07g01039 Cmo-Chr7:5258432 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00805 - - csv:101222644 1308.51