Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo02g00807 | ATGGGCCGGGCCTTGCTGTTGAATGGAGCAAGTCCACTCGTTATCGATGAAAGCACTACAAAACAGCCTGAAATATCGGGAATCCATATCTTCATGACACGTATGGCAGAAGGAGAGGATATCCAGCCACTCGTCTGTGACAACGGAACTGGAATGGTTAAGGCTGGCTTTGCTGGAGATGATGCTCCAAGGGCCGTGTTCCCTAGTATAGTAGGTCGACCAAGGCATACTGGTGTGATGGTTGGTATGGGCCAAAAGGATGCGTATGTTGGGGATGAGGCTCAGTCCAAACGAGGTATATTGACTTTGAAATATCCTATAGAGCATGGTATCGTGAGCAATTGGGATGACATGGAAAAAATTTGGCATCATACCTTCTACAATGAACTCCGAGTGGCTCCTGAAGAGCACCCTGTCCTACTCACTGAAGCCCCTCTGAATCCAAAGGCAAATCGTGAAAAAATGACCCAAATCATGTTCGAGACCTTCAACGCTCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCGCTCTATGCTAGTGGACGCACAACTGGTATTGTTATGGATTCTGGTGATGGTGTCAGTCATACTGTCCCAATTTACGAGGGATATGCTCTCCCCCATGCCATTCTTCGTCTCGACCTCGCTGGCCGTGACCTCACTGATGCCCTTATGAAAATCTTGACTGAACGTGGGTACTCCTTCACCACCTCAGCAGAGCGAGAAATTGTGAGAGATGTGAAGGAAAAACTAGCATACATTGCCCTCGATTACGAGCAAGAACTCGAAACTTCCAAAACTGGTTCATCTGTTGAGAAGAGTTATGAACTTCCAGATGGGCAGATTATCACAATCGGTGCAGAACGTTTCCGATGCCCTGAAGTTCTTTTCCAGCCTTCAATGATTGGAATGGAAGCTGCAGGCATCCACGAAACAACCTATAACTCCATCATGAAATGCGACGTTGATATCAGAAAGGATCTGTATGGAAACATTGTTCTTAGTGGAGGAACAACCATGTTCCCTGGCATCGCTGATCGAATGAGCAAAGAAATAACTGCATTAGCCCCAAGCAGCATGAAAATTAAAGTGGTAGCTCCTCCTGAAAGGAAGTACAGTGTCTGGATTGGTGGCTCCATTCTAGCCTCACTCAGCACGTTTCAGCAGATGTGGATTGCAAAGGCTGAGTATGATGAGTCTGGCCCATCCATCGTGCACAGGAAATGCTTCTGA | 1236 | 46.93 | MGRALLLNGASPLVIDESTTKQPEISGIHIFMTRMAEGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQELETSKTGSSVEKSYELPDGQIITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF | 411 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4963969 | 4966374 | - | CmoCh02G008070.1 | Cmo02g00807 | 376404 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo02g00807 | 411 | SUPERFAMILY | Actin-like ATPase domain | 183 | 411 | IPR043129 | - | |
Cmo02g00807 | 411 | PRINTS | Actin signature | 176 | 195 | IPR004000 | - | |
Cmo02g00807 | 411 | PRINTS | Actin signature | 97 | 119 | IPR004000 | - | |
Cmo02g00807 | 411 | PRINTS | Actin signature | 62 | 71 | IPR004000 | - | |
Cmo02g00807 | 411 | PRINTS | Actin signature | 85 | 96 | IPR004000 | - | |
Cmo02g00807 | 411 | PRINTS | Actin signature | 151 | 164 | IPR004000 | - | |
Cmo02g00807 | 411 | PRINTS | Actin signature | 272 | 288 | IPR004000 | - | |
Cmo02g00807 | 411 | PANTHER | ACTIN 3 | 35 | 410 | - | - | |
Cmo02g00807 | 411 | CDD | NBD_sugar-kinase_HSP70_actin | 44 | 217 | - | - | |
Cmo02g00807 | 411 | Gene3D | - | 44 | 405 | - | - | |
Cmo02g00807 | 411 | SMART | actin_3 | 41 | 411 | IPR004000 | - | |
Cmo02g00807 | 411 | Pfam | Actin | 39 | 411 | IPR004000 | - | |
Cmo02g00807 | 411 | Gene3D | - | 174 | 374 | - | - | |
Cmo02g00807 | 411 | ProSitePatterns | Actins signature 1. | 89 | 99 | IPR004001 | - | |
Cmo02g00807 | 411 | PANTHER | ACTIN | 35 | 410 | IPR004000 | - | |
Cmo02g00807 | 411 | ProSitePatterns | Actins signature 2. | 392 | 400 | IPR004001 | - | |
Cmo02g00807 | 411 | SUPERFAMILY | Actin-like ATPase domain | 40 | 188 | IPR043129 | - | |
Cmo02g00807 | 411 | Gene3D | Actin; Chain A, domain 4 | 216 | 307 | - | - | |
Cmo02g00807 | 411 | ProSitePatterns | Actins and actin-related proteins signature. | 140 | 152 | IPR020902 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo02g00807 | Cmo20g00447 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00807 | Cmo-Chr2:4963969 | Cmo14g00419 | Cmo-Chr14:1994092 | 0 | dispersed | |
Cmo04g01248 | Cmo-Chr4:6331020 | Cmo02g00807 | Cmo-Chr2:4963969 | 2.68E-17 | dispersed | |
Cmo11g01508 | Cmo-Chr11:10693121 | Cmo02g00807 | Cmo-Chr2:4963969 | 0 | dispersed | |
Cmo19g00310 | Cmo-Chr19:2317534 | Cmo02g00807 | Cmo-Chr2:4963969 | 0 | dispersed | |
Cmo02g00807 | Cmo-Chr2:4963969 | Cmo20g00447 | Cmo-Chr20:2077075 | 0 | wgd | |
Cmo02g00807 | Cmo-Chr2:4963969 | Cmo03g00438 | Cmo-Chr3:4997804 | 0 | wgd | |
Cmo02g00807 | Cmo-Chr2:4963969 | Cmo07g01037 | Cmo-Chr7:5240682 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo02g00807 | K10355 | - | han:110894935 | 750.74 |