Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00831 ATGAAGCCATCATTTTCGTCCAATTTCGTCGCCGGAGTAGCCTTGCCGGAACCCTGCTGTGTCGAAATCCAAGAAGTGGAGAGGTTGAAGAAATTTGGTGGATGGTTCGTTCTACAAGGAACCTCCGTCTTTAGTCAAAATTTCTATGGAGTTTTGAAGCTTCTCCGCGAGTACTTCGAACTAGAAGAAGAATCGAAATGGATCGTCGCAACGAAGGATTTTGGATTACGATGGGTCTGGGGCATGAAAATGATTCACATTCAACTTTTGGCAGCCCTTCATTATGAGACACAAAACGAGCACGTCACTGGTTTATCGATGATTGTTTTCCCGAACAAGAAGCAAGCAATTCAAGCTCCAAATAGTAAAATGACAGGAATTCTGTCAAATGTGAATGTTCTTCATTGGGAGCAGCATACTGATAATTATCAATCGTCACATCGACTTATTGGTTGCGTATTCGGACCCAAATCACTAAGGTCTGCTGACTTACCTCTAACAAAAACATCTTCTGTATGGAAGACCAATCAATATGGAGATGATGCATCTATATCTCATGGGTTGGAGGATCAGGTTAAAGATAATGTACATGATCTGCAACCATGTCCAAGAAGTAATTCTAATAGGGACGATGACGGTCAACTAGCAATAGAAGGTCGTCACTACAAGGAAATTGAAACGGGTCTCGTATCGATGGGATCGGCCTATATTAAGGAGGATGACAGCTTCAGTTTGATAAATCAAACTGCCAATGATGGGGATCACCATTTTGGGTTACTAGATCATAGAGGGAAGATAGACGACAATGTTGTCTCCATTGATGATGATTACGGTAAGCAGGATCCAAATATAATCTCGTTTGGAGAATTTCCTGATGAGCAAGATATCATCCCCTTAGGCAGGTCTCTTGGAAGCCACGACTCGACATTCTACGAATCTTCATTCCAACCATCTGAAGTTGTTGGTGTCACTGATTTGGAACCATCAAATTTTGATGTACTTGTAAGCAGTCCTCAGATAGCTATGCAAAAGCCGGATAGGACACCAAAGAATAGACCAGACTACAAAACGAGGAAAGAAGCTCCAAACAGCTTCCCTTCAAACGTTCGAAGTTTGATGTCGACTGGTATGCTCGATGGCGTTCCTGTGAAGTATGTTTCTGTAGCTAGAGAGTGGCTTCAAGGAATAATTATAAGGCGATCTGGGTATCTTTGTGGATGCCAATCTTGCAACTTTTCCAAGGTAAGTCATCAAAATTTGTCATTGATGCAAGAGTTGAAGATGAATTCAGTCAGATCTAACACACCCTTTGTGTTTCCTTGGAAGATGCTTAATGCGTATGAGTTTGAGCGGCATGCTGGCTGCAAAACAAAACACCCAAATAATCATATATACTTTGAGAATGGGAAAACTATTTACCAGATAGTACAAGAACTAAGAAGCACTCCGGAGAGCTTGTTGTTTGATACAATTCAAACCATCTTCGGTGCACCAATCAATCAGAAATCTTTTCGGATTTGGAAAGGTAAAGATGCAACTCTTACTCTTTCCCCTTTTAAGTCTTTAAAAATATGTTTTAATCGTTTCAAGCAGCTACCCGTGAGCTTCAGCGCATATATGGGAAGGATGAACTTAGCCTTCAGTAGAGTTCATTGCCAGTTCTGTAAATGTAGGACGAGATTAGGTGGATACTGTGCAGAGAATCAGCTTCAAGCAATAGACAAGTCCATGATCATGGAGGAGGGGAAAATGTCCTAG 1758 41.35 MKPSFSSNFVAGVALPEPCCVEIQEVERLKKFGGWFVLQGTSVFSQNFYGVLKLLREYFELEEESKWIVATKDFGLRWVWGMKMIHIQLLAALHYETQNEHVTGLSMIVFPNKKQAIQAPNSKMTGILSNVNVLHWEQHTDNYQSSHRLIGCVFGPKSLRSADLPLTKTSSVWKTNQYGDDASISHGLEDQVKDNVHDLQPCPRSNSNRDDDGQLAIEGRHYKEIETGLVSMGSAYIKEDDSFSLINQTANDGDHHFGLLDHRGKIDDNVVSIDDDYGKQDPNIISFGEFPDEQDIIPLGRSLGSHDSTFYESSFQPSEVVGVTDLEPSNFDVLVSSPQIAMQKPDRTPKNRPDYKTRKEAPNSFPSNVRSLMSTGMLDGVPVKYVSVAREWLQGIIIRRSGYLCGCQSCNFSKVSHQNLSLMQELKMNSVRSNTPFVFPWKMLNAYEFERHAGCKTKHPNNHIYFENGKTIYQIVQELRSTPESLLFDTIQTIFGAPINQKSFRIWKGKDATLTLSPFKSLKICFNRFKQLPVSFSAYMGRMNLAFSRVHCQFCKCRTRLGGYCAENQLQAIDKSMIMEEGKMS 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5051530 5056780 - CmoCh02G008310.1 Cmo02g00831 376428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00831 585 MobiDBLite consensus disorder prediction 339 366 - -
Cmo02g00831 585 Pfam Tify domain binding domain 444 479 IPR032308 -
Cmo02g00831 585 PANTHER DNA-BINDING PROTEIN 109 415 - -
Cmo02g00831 585 PANTHER DNA-BINDING PROTEIN 442 509 - -
Cmo02g00831 585 PANTHER AUTOIMMUNE REGULATOR 109 415 - -
Cmo02g00831 585 PANTHER AUTOIMMUNE REGULATOR 442 509 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00831 Cmo20g00463 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00831 Cmo-Chr2:5051530 Cmo14g00154 Cmo-Chr14:674389 5.21E-34 dispersed
Cmo02g00831 Cmo-Chr2:5051530 Cmo20g00463 Cmo-Chr20:2147031 0 wgd
Cmo02g00831 Cmo-Chr2:5051530 Cmo04g01272 Cmo-Chr4:6453158 1.69E-62 wgd
Cmo02g00831 Cmo-Chr2:5051530 Cmo04g00229 Cmo-Chr4:1146103 8.58E-67 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00831 - - cpep:111794439 785.793