Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00862 ATGTTGTATAGTTACAAGCATAGCTTTTCTGGGTTCTCCGCGAAGCTTAATGCAAGCCAAGCAATGACGTTATCGAAGATGGAAGGAGTGATATCCATATTCAAGAGTAAAACTATGGAGCTCCACACAACAAGAAGTTGGGACTTCTTGGGGCTTCCCATTCCTTCGTATAGCGGTCGTAGGACGTTTGATACACCACGTTCGCGTAAGCTGGCTGATGGCGACGACGTTGTTGTTGGCATCTTTGATTCAGGCATATGGCCTGAATCGGAAAGTTTCGAGGATGATCGGTGGATGTCCCCGGTTCCATGCAGCTGGAAGGGCAAATGCGTGAAAGCGTATAGATTCAACCCTTCATTAGCTTGCAATCGCAAGCTAATTGGCGCTCGTTACTATCTCAAAGGTTTCGAAGCCGAATACGGAGGACTCAACACAAGCGGGAACCCTGAGTTTGAATCGCCTCGAGACTTTTTGGGGCACGGGACTCATACAGCTTCAACGGCCGTGGGTGGCATTGTAGAGGATGTGAGCTTCACAGGGTCATCGTTAGGCAAAGGCATCGCTCGAGGAGGAGCGCCACGGGCTAGGTTGGCTGTGTACAAGGTGTGCTGGGGAAAGGACTACGAAGGGAAGTGCACGGATGCAGACGTGATGGCTGCGTTTGACGACGCTTTGTGCGACGGAGTCGACGTTATCTCGGCGTCGTTCGGAGGGTCGCCGCCGTTGGCTCCATTTTTTGAGTCTAGTAGTGCGATTGGGTCGTTCCATGGCATGCAGAAGGGAGTGAGTGTTGTGTTCTCAGCTGGCCCAGTTTCGATGGGGGATGCACAACAAGCGCTGAACGCCATCAATGCCTCGGCTTTGATATTTGGTGCCCCGCCCACGCTGCAGCTCCCTGACCTTGATCTCCTCCCCACCGTTCGAATTGACATTACCCACGCCACTCAAATTAGAAACTTTCTTGCTGAACTGCCCAGGCTGCCAGTAGTACAGATCAGGGCTGCAAGAAGCGTGATTGGGAAGTCGGTGGCTCCGAGTGTGGCATACTTCTCGTCTAGAGGACCAAGCTCACTTTCGCCTGACATTCTTAAGCCAGACATAAGTGCCCCAGGAGTGAACATATTGGCGGCATGGCCTCCAGAAACTGCTCCAACAGTGCGGCCAACAGCGACAGAAGGAGAAAGCCAAAGGCAAGTCAAATGGAATTTCCAATCAGGGACTTCAATGTCATGCCCTCACATCTCTGGAGTCGTTGCCCTCATCAAATCTCTGCATCCAAGCTGGTCTCCTGCAGCCATTAGATCTGCCCTCATCACCACAGCCACCAAGAGAGACTCCACTCGCAACACCATCCTAGCAGGTGGATCCACGAAACCATCCGATCCATTCGACATTGGAGGTGGCCAAGTGAACCCATTGAAGGCAGTAAATCCAGGACTAGTGTACGACATGACAGCCAATGATTACATTATTTTTCTCTGCAATATTGGGTACACAGAGCAGCAAATCAGGATGATTGTGAACCCTTCTTCACAAACACTTGTTTGTTGTCCACCATTTCTATCCACCTCCATTGCCAATCTCAATTATCCTTCCATTACACTTGCAAATCTCAAATCCACAACCACAATCAAAAGGACTGTTCGTAATGTAGCAGCAAACAAAAATGCCATCTACTTTCTTAAGCTGAATCCTCCCAATGGAGTGCAAGTATTGGTATGGCCTAGGATTCTTCTTTTCTCTTGGTTTAGGCAGCACGTTTCCTACTACATCACCATAACCCCACTCAAGAAAGCTCGTGGGAGGTATGATTTTGGGGAGATTGAATGGTCAGATGGGTTCCATAGGGTCACAAGTCCTCTGGTTGTTCGTGTTAGCAGCGCTAGCTAG 1890 49.89 MLYSYKHSFSGFSAKLNASQAMTLSKMEGVISIFKSKTMELHTTRSWDFLGLPIPSYSGRRTFDTPRSRKLADGDDVVVGIFDSGIWPESESFEDDRWMSPVPCSWKGKCVKAYRFNPSLACNRKLIGARYYLKGFEAEYGGLNTSGNPEFESPRDFLGHGTHTASTAVGGIVEDVSFTGSSLGKGIARGGAPRARLAVYKVCWGKDYEGKCTDADVMAAFDDALCDGVDVISASFGGSPPLAPFFESSSAIGSFHGMQKGVSVVFSAGPVSMGDAQQALNAINASALIFGAPPTLQLPDLDLLPTVRIDITHATQIRNFLAELPRLPVVQIRAARSVIGKSVAPSVAYFSSRGPSSLSPDILKPDISAPGVNILAAWPPETAPTVRPTATEGESQRQVKWNFQSGTSMSCPHISGVVALIKSLHPSWSPAAIRSALITTATKRDSTRNTILAGGSTKPSDPFDIGGGQVNPLKAVNPGLVYDMTANDYIIFLCNIGYTEQQIRMIVNPSSQTLVCCPPFLSTSIANLNYPSITLANLKSTTTIKRTVRNVAANKNAIYFLKLNPPNGVQVLVWPRILLFSWFRQHVSYYITITPLKKARGRYDFGEIEWSDGFHRVTSPLVVRVSSAS 629
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5244539 5248658 + CmoCh02G008620.1 Cmo02g00862 376459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00862 629 SUPERFAMILY Subtilisin-like 6 520 IPR036852 GO:0004252|GO:0006508
Cmo02g00862 629 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.18 269 620 - -
Cmo02g00862 629 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.18 1 269 - -
Cmo02g00862 629 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 42 IPR037045 -
Cmo02g00862 629 CDD Peptidases_S8_3 40 442 IPR034197 -
Cmo02g00862 629 PRINTS Subtilisin serine protease family (S8) signature 405 421 IPR015500 -
Cmo02g00862 629 PRINTS Subtilisin serine protease family (S8) signature 74 93 IPR015500 -
Cmo02g00862 629 PRINTS Subtilisin serine protease family (S8) signature 156 169 IPR015500 -
Cmo02g00862 629 Pfam Subtilase family 74 446 IPR000209 GO:0006508|GO:0008236
Cmo02g00862 629 Gene3D - 493 626 - -
Cmo02g00862 629 Pfam Peptidase inhibitor I9 1 42 IPR010259 -
Cmo02g00862 629 Pfam Fibronectin type-III domain 527 623 IPR041469 -
Cmo02g00862 629 ProSiteProfiles Serine proteases, subtilase domain profile. 46 476 - -
Cmo02g00862 629 ProSitePatterns Serine proteases, subtilase family, serine active site. 406 416 IPR023828 -
Cmo02g00862 629 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 269 620 IPR045051 -
Cmo02g00862 629 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 269 IPR045051 -
Cmo02g00862 629 Gene3D Peptidase S8/S53 domain 43 492 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00862 Cmo-Chr2:5244539 Cmo16g01045 Cmo-Chr16:7296692 1.64E-122 dispersed
Cmo02g00862 Cmo-Chr2:5244539 Cmo17g00660 Cmo-Chr17:6842754 6.52E-58 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00862 - - oeu:111394006 627.476