Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo02g00862 | ATGTTGTATAGTTACAAGCATAGCTTTTCTGGGTTCTCCGCGAAGCTTAATGCAAGCCAAGCAATGACGTTATCGAAGATGGAAGGAGTGATATCCATATTCAAGAGTAAAACTATGGAGCTCCACACAACAAGAAGTTGGGACTTCTTGGGGCTTCCCATTCCTTCGTATAGCGGTCGTAGGACGTTTGATACACCACGTTCGCGTAAGCTGGCTGATGGCGACGACGTTGTTGTTGGCATCTTTGATTCAGGCATATGGCCTGAATCGGAAAGTTTCGAGGATGATCGGTGGATGTCCCCGGTTCCATGCAGCTGGAAGGGCAAATGCGTGAAAGCGTATAGATTCAACCCTTCATTAGCTTGCAATCGCAAGCTAATTGGCGCTCGTTACTATCTCAAAGGTTTCGAAGCCGAATACGGAGGACTCAACACAAGCGGGAACCCTGAGTTTGAATCGCCTCGAGACTTTTTGGGGCACGGGACTCATACAGCTTCAACGGCCGTGGGTGGCATTGTAGAGGATGTGAGCTTCACAGGGTCATCGTTAGGCAAAGGCATCGCTCGAGGAGGAGCGCCACGGGCTAGGTTGGCTGTGTACAAGGTGTGCTGGGGAAAGGACTACGAAGGGAAGTGCACGGATGCAGACGTGATGGCTGCGTTTGACGACGCTTTGTGCGACGGAGTCGACGTTATCTCGGCGTCGTTCGGAGGGTCGCCGCCGTTGGCTCCATTTTTTGAGTCTAGTAGTGCGATTGGGTCGTTCCATGGCATGCAGAAGGGAGTGAGTGTTGTGTTCTCAGCTGGCCCAGTTTCGATGGGGGATGCACAACAAGCGCTGAACGCCATCAATGCCTCGGCTTTGATATTTGGTGCCCCGCCCACGCTGCAGCTCCCTGACCTTGATCTCCTCCCCACCGTTCGAATTGACATTACCCACGCCACTCAAATTAGAAACTTTCTTGCTGAACTGCCCAGGCTGCCAGTAGTACAGATCAGGGCTGCAAGAAGCGTGATTGGGAAGTCGGTGGCTCCGAGTGTGGCATACTTCTCGTCTAGAGGACCAAGCTCACTTTCGCCTGACATTCTTAAGCCAGACATAAGTGCCCCAGGAGTGAACATATTGGCGGCATGGCCTCCAGAAACTGCTCCAACAGTGCGGCCAACAGCGACAGAAGGAGAAAGCCAAAGGCAAGTCAAATGGAATTTCCAATCAGGGACTTCAATGTCATGCCCTCACATCTCTGGAGTCGTTGCCCTCATCAAATCTCTGCATCCAAGCTGGTCTCCTGCAGCCATTAGATCTGCCCTCATCACCACAGCCACCAAGAGAGACTCCACTCGCAACACCATCCTAGCAGGTGGATCCACGAAACCATCCGATCCATTCGACATTGGAGGTGGCCAAGTGAACCCATTGAAGGCAGTAAATCCAGGACTAGTGTACGACATGACAGCCAATGATTACATTATTTTTCTCTGCAATATTGGGTACACAGAGCAGCAAATCAGGATGATTGTGAACCCTTCTTCACAAACACTTGTTTGTTGTCCACCATTTCTATCCACCTCCATTGCCAATCTCAATTATCCTTCCATTACACTTGCAAATCTCAAATCCACAACCACAATCAAAAGGACTGTTCGTAATGTAGCAGCAAACAAAAATGCCATCTACTTTCTTAAGCTGAATCCTCCCAATGGAGTGCAAGTATTGGTATGGCCTAGGATTCTTCTTTTCTCTTGGTTTAGGCAGCACGTTTCCTACTACATCACCATAACCCCACTCAAGAAAGCTCGTGGGAGGTATGATTTTGGGGAGATTGAATGGTCAGATGGGTTCCATAGGGTCACAAGTCCTCTGGTTGTTCGTGTTAGCAGCGCTAGCTAG | 1890 | 49.89 | MLYSYKHSFSGFSAKLNASQAMTLSKMEGVISIFKSKTMELHTTRSWDFLGLPIPSYSGRRTFDTPRSRKLADGDDVVVGIFDSGIWPESESFEDDRWMSPVPCSWKGKCVKAYRFNPSLACNRKLIGARYYLKGFEAEYGGLNTSGNPEFESPRDFLGHGTHTASTAVGGIVEDVSFTGSSLGKGIARGGAPRARLAVYKVCWGKDYEGKCTDADVMAAFDDALCDGVDVISASFGGSPPLAPFFESSSAIGSFHGMQKGVSVVFSAGPVSMGDAQQALNAINASALIFGAPPTLQLPDLDLLPTVRIDITHATQIRNFLAELPRLPVVQIRAARSVIGKSVAPSVAYFSSRGPSSLSPDILKPDISAPGVNILAAWPPETAPTVRPTATEGESQRQVKWNFQSGTSMSCPHISGVVALIKSLHPSWSPAAIRSALITTATKRDSTRNTILAGGSTKPSDPFDIGGGQVNPLKAVNPGLVYDMTANDYIIFLCNIGYTEQQIRMIVNPSSQTLVCCPPFLSTSIANLNYPSITLANLKSTTTIKRTVRNVAANKNAIYFLKLNPPNGVQVLVWPRILLFSWFRQHVSYYITITPLKKARGRYDFGEIEWSDGFHRVTSPLVVRVSSAS | 629 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 5244539 | 5248658 | + | CmoCh02G008620.1 | Cmo02g00862 | 376459 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo02g00862 | 629 | SUPERFAMILY | Subtilisin-like | 6 | 520 | IPR036852 | GO:0004252|GO:0006508 | |
Cmo02g00862 | 629 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT3.18 | 269 | 620 | - | - | |
Cmo02g00862 | 629 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT3.18 | 1 | 269 | - | - | |
Cmo02g00862 | 629 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 1 | 42 | IPR037045 | - | |
Cmo02g00862 | 629 | CDD | Peptidases_S8_3 | 40 | 442 | IPR034197 | - | |
Cmo02g00862 | 629 | PRINTS | Subtilisin serine protease family (S8) signature | 405 | 421 | IPR015500 | - | |
Cmo02g00862 | 629 | PRINTS | Subtilisin serine protease family (S8) signature | 74 | 93 | IPR015500 | - | |
Cmo02g00862 | 629 | PRINTS | Subtilisin serine protease family (S8) signature | 156 | 169 | IPR015500 | - | |
Cmo02g00862 | 629 | Pfam | Subtilase family | 74 | 446 | IPR000209 | GO:0006508|GO:0008236 | |
Cmo02g00862 | 629 | Gene3D | - | 493 | 626 | - | - | |
Cmo02g00862 | 629 | Pfam | Peptidase inhibitor I9 | 1 | 42 | IPR010259 | - | |
Cmo02g00862 | 629 | Pfam | Fibronectin type-III domain | 527 | 623 | IPR041469 | - | |
Cmo02g00862 | 629 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 46 | 476 | - | - | |
Cmo02g00862 | 629 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 406 | 416 | IPR023828 | - | |
Cmo02g00862 | 629 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 269 | 620 | IPR045051 | - | |
Cmo02g00862 | 629 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 1 | 269 | IPR045051 | - | |
Cmo02g00862 | 629 | Gene3D | Peptidase S8/S53 domain | 43 | 492 | IPR036852 | GO:0004252|GO:0006508 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00862 | Cmo-Chr2:5244539 | Cmo16g01045 | Cmo-Chr16:7296692 | 1.64E-122 | dispersed | |
Cmo02g00862 | Cmo-Chr2:5244539 | Cmo17g00660 | Cmo-Chr17:6842754 | 6.52E-58 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo02g00862 | - | - | oeu:111394006 | 627.476 |