Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00864 ATGGAAGACTTTTTAGACAATATACCGCCCATGGATCTGATGCGTTCTGAGAAGATGACTTTTGTTCAGCTTATCATCCCTGTTGAGTCCGCTCATCGAGCCATTTCTTACCTTGGCGAGCTTGGCATCCTTCAATTTAAAGATTTAAACGAGGCCAAAAGTCCTTTCCAGAGAACCTTTGTTAACCAGGTAAAGCGATGTGCAGAGATGTCAAGGAAGCTGAGATTTTTCAAAGATCAAATCAGTAAAGCTGGTGTACTGGCATCTACTCGGCCAATTCTTCAAGAACACATTGAGCTAGAGGATTTAGAGATACGACTAGCCGATCATGAGCATGAACTGATTGAAATGAATTCCAACAGTGAGAAACTTCGACAGTCATATAATGAACTCTTAGAATTCAAGGTGGTATTGCAAAAGGCAAGTGTATTTCTGGTGTCCAGTAGTAGCCATTCAGTCTCAGAAGAAAGGGAGTTGAATGAAAATGTTTTCATGAATGATAACTATGTTGACGATGGATTACCACTTGAGGAAATGAGACCTGGACCGTCCAGTCAATCTGGTTTGAGATTTATTTGTGGTATTATTTGTAAATCCAAAGTTCTTAGATTTGAAAGGATGCTGTTTCGTGCAACAAGGGGCAATATGCTTTTCAATCAGGCACCAGCAGATATACAGATCATGGATCCCATATCTACGGAAATGGTTGAGAAAACAGTATTTGTAGTGTTTTTCTCTGGGGAGCAAGCCAGAAATAAAGTTCTGAAGATCTGTGAGGCTTTTGGAGCAAATTGCTATCCTGTTCCTGAAGATATAACCAAACAAAGGAAGATAACTAGAGAAGTTTCATCTCGCCTCATTGAACTTGAAGCCACTTTAGATGCTGGGATCCGTCACCGAAATGAGGCTCTTGCATCGATGGGGTTTCACTTGATTAAATGGATGAATATGGTAAGAAGGGAAAAGGCTGTATATGATACACTGAACATGTTGAATTTTGATGTCACTAAAAAATGTCTTGTTGGAGAAGGCTGGTGCCCAATCTTTGCAAAATCTCAGATTCAAGAGGCACTTCAACGAGCAACATTTGATAGCAGTTCACAAGTGGGCATAATATTTCATGTGATGGATACGGTTGAATCCCCTCCTACATATTTTAGAACAAACCGTTTGACAAATGCTTTTCAGGAAATTGTTGATGCCTATGGTGTTGCTAGATATCAAGAAGCAAATCCTGCAGTTTACACTGTTATTACATTTCCGTTCCTATTCGCAGTGATGTTTGGGGATTGGGGTCATGGAATATGCTTGTTGCTTGGAGCTTTATTTCTTATAGCTCGTGAGAGTAAGCTCAATAATCAGAAATTGGGAAGCTTTATGGAGATGCTATTTGGTGGACGCTATGTTCTTCTTTTGATGTCCCTCTTTTCAATTTATTGTGGGTTGATCTACAATGAGTTCTTCTCTGTTCCGTATCATATATTTGGTGCATCTGCTTACAAGTGTCGAGATAATTCATGCAGTGATGCATACACTGTTGGGTTAGTTAAATACCGTGATGCCTACCCGTTTGGTGTTGACCCGAGTTGGCGTGGAAGTCGTTCAGAACTTCCTTTTCTGAACTCTCTTAAAATGAAGTTGTCTATCTTGTTGGGTATTGCCCAAATGAACTTAGGGATCATATTGAGTTATTTTAACGCACGTTTTATTGGAAGCTCGATTGATATCAGGTACCAGTTTGTACCACAAGTGATCTTTCTTAACAGCCTTTTTGGATATCTTTCTCTTCTCATTGTCATCAAGTGGTGCACTGGATCTCAAGCTGACCTCTACCATGTGATGATTTACATGTTTTTGAGCCCATTTGATGATCTTGGAGAGAACGAATTGTTTTGGGGCCAAAGACCACTTCAAGTTATCTTGTTGATATTGGCTATAGTTGCAGTGCCTTGGATGCTTTTTCCTAAGCCCTTTGTCTTGAAAAAGATTCATACAGAGAGATTTCAAGGTCGTACTTATGGGGTGCTTGGATCCTCTGAGGTAGATCTTGAGATGGAACCTAATTCGGCAAAGGAACACCAAGAGGATTTCAATTTTAGCGAGATCTTTGTTCACCAAATGATTCACTCCATAGAATTTGTCTTGGGTGCAGTTTCAAATACAGCATCATATCTTCGACTTTGGGCTTTAAGCTTGGCGCACTCAGAACTGTCAACAGTTTTCTATGAGAAAGTTCTTCTCCTAGCTTGGGGGTATGACAGCTTTGTCATCCGGATGATTGGTTTAGCTGTTTTTTCCTTTGCCACTGCTTTCATACTTCTTATGATGGAGACCCTTAGTGCCTTCCTTCATGCCTTGCGTCTTCATTGGGTTGAGTTTCAAAATAAATTCTACCATGGTGATGGCCACAAGTTCAAACCATTTTCCTTTGCCTCCAACGAGGATGAAGATTAA 2454 40.22 MEDFLDNIPPMDLMRSEKMTFVQLIIPVESAHRAISYLGELGILQFKDLNEAKSPFQRTFVNQVKRCAEMSRKLRFFKDQISKAGVLASTRPILQEHIELEDLEIRLADHEHELIEMNSNSEKLRQSYNELLEFKVVLQKASVFLVSSSSHSVSEERELNENVFMNDNYVDDGLPLEEMRPGPSSQSGLRFICGIICKSKVLRFERMLFRATRGNMLFNQAPADIQIMDPISTEMVEKTVFVVFFSGEQARNKVLKICEAFGANCYPVPEDITKQRKITREVSSRLIELEATLDAGIRHRNEALASMGFHLIKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKSQIQEALQRATFDSSSQVGIIFHVMDTVESPPTYFRTNRLTNAFQEIVDAYGVARYQEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALFLIARESKLNNQKLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPYHIFGASAYKCRDNSCSDAYTVGLVKYRDAYPFGVDPSWRGSRSELPFLNSLKMKLSILLGIAQMNLGIILSYFNARFIGSSIDIRYQFVPQVIFLNSLFGYLSLLIVIKWCTGSQADLYHVMIYMFLSPFDDLGENELFWGQRPLQVILLILAIVAVPWMLFPKPFVLKKIHTERFQGRTYGVLGSSEVDLEMEPNSAKEHQEDFNFSEIFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDSFVIRMIGLAVFSFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGHKFKPFSFASNEDED 817
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5255585 5264359 - CmoCh02G008640.1 Cmo02g00864 376461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00864 817 PANTHER VACUOLAR PROTON ATPASE A1 5 816 - -
Cmo02g00864 817 PANTHER VACUOLAR PROTON ATPASES 5 816 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cmo02g00864 817 PIRSF ATP6V0A1 9 817 IPR026028 GO:0000220|GO:0046961
Cmo02g00864 817 Pfam V-type ATPase 116kDa subunit family 37 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cmo02g00864 817 Coils Coil 93 127 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00864 Cmo20g00495 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00864 Cmo-Chr2:5255585 Cmo19g00696 Cmo-Chr19:7351871 3.35E-93 dispersed
Cmo02g00864 Cmo-Chr2:5255585 Cmo20g00495 Cmo-Chr20:2343070 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00864 K02154 - csv:101216514 1541.17