Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo02g00893 | ATGGGCAAGGACGTTGAGGCAGCCGAGCAAGGCCAATTCCAAGCCAAGGACTACCAAGACCCACCTCCGGCTCCTTTCATCGACCCAGACGAGCTCACCAAATGGTCCCTTTACAGAGCCGCCATCGCCGAGTTCATCGCCACTCTCCTCTTCCTCTACGTCACCGTTTTGACTGTCATCGGCTACTCCCACCAAAGTGACTCTAATGTCTCCAAAGACCCCTGTAACGGCGTCGGAATCCTCGGCATCGCCTGGGCCTTCGGCGGCATGATCTTTATCCTCGTCTACTGCACCGCCGGTATCTCCGGTGGCCACATAAACCCAGCAGTGACCTTTGGGCTGTTCTTGGCAAGGAAGGTGTCGTTGGTTAGGGCGGTGTTGTACATGGTAGCTCAGTGTGCGGGTGCTATCTGTGGCTGTGGGTTGGTTAAGGCTTTCCAGTCGGCGTACTACGTGAGGTATAATGGCGGCGCCAACATGCTCAGTGATGGGTACAACAAAGGCACTGGCTTGGGAGCTGAAATCATCGGTACCTTTGTTCTTGTCTACACCGTCTTCTCCGCCACGGATCCCAAAAGAAGCGCCAGAGATTCCCATGTTCCGGTTTTGGCGCCACTCCCAATTGGATTTGCAGTGTTCATGGTTCACTTAGCCACAATCCCCATCACCGGAACTGGAATTAACCCTGCAAGAAGCTTCGGAGCTGCTGTCATCTTCAACCACGAAAAAGCCTGGGATGATCAATGGATTTTCTGGGTTGGTCCATTCATTGGAGCTGCAATTGCTGCAATTTACCACCAGTATGTACTCAGAGCTGGCGCCATTAAAGCTCTTGGATCCTTCAGGAGCAACGCTTAA | 858 | 53.26 | MGKDVEAAEQGQFQAKDYQDPPPAPFIDPDELTKWSLYRAAIAEFIATLLFLYVTVLTVIGYSHQSDSNVSKDPCNGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAVLYMVAQCAGAICGCGLVKAFQSAYYVRYNGGANMLSDGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNHEKAWDDQWIFWVGPFIGAAIAAIYHQYVLRAGAIKALGSFRSNA | 285 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 5507658 | 5509309 | - | CmoCh02G008930.1 | Cmo02g00893 | 376490 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo02g00893 | 285 | PANTHER | AQUAPORIN PIP2-4-RELATED | 1 | 285 | - | - | |
Cmo02g00893 | 285 | TIGRFAM | MIP: MIP family channel proteins | 43 | 265 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo02g00893 | 285 | Gene3D | Glycerol uptake facilitator protein. | 24 | 285 | IPR023271 | - | |
Cmo02g00893 | 285 | ProSitePatterns | MIP family signature. | 105 | 113 | IPR022357 | - | |
Cmo02g00893 | 285 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 1 | 285 | IPR034294 | - | |
Cmo02g00893 | 285 | PRINTS | Major intrinsic protein family signature | 39 | 58 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo02g00893 | 285 | PRINTS | Major intrinsic protein family signature | 87 | 111 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo02g00893 | 285 | PRINTS | Major intrinsic protein family signature | 124 | 143 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo02g00893 | 285 | PRINTS | Major intrinsic protein family signature | 173 | 191 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo02g00893 | 285 | PRINTS | Major intrinsic protein family signature | 209 | 231 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo02g00893 | 285 | PRINTS | Major intrinsic protein family signature | 249 | 269 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo02g00893 | 285 | CDD | MIP | 39 | 269 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo02g00893 | 285 | Pfam | Major intrinsic protein | 31 | 266 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo02g00893 | 285 | SUPERFAMILY | Aquaporin-like | 31 | 271 | IPR023271 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo02g00893 | Cmo20g00519 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00893 | Cmo-Chr2:5507658 | Cmo03g01239 | Cmo-Chr3:9556212 | 1.60E-173 | dispersed | |
Cmo15g01298 | Cmo-Chr15:8913115 | Cmo02g00893 | Cmo-Chr2:5507658 | 2.13E-140 | dispersed | |
Cmo18g00896 | Cmo-Chr18:10199572 | Cmo02g00893 | Cmo-Chr2:5507658 | 2.26E-152 | dispersed | |
Cmo02g00893 | Cmo-Chr2:5507658 | Cmo20g00519 | Cmo-Chr20:2483693 | 5.02E-146 | wgd | |
Cmo02g00893 | Cmo-Chr2:5507658 | Cmo06g00371 | Cmo-Chr6:1792397 | 1.04E-145 | wgd | |
Cmo02g00893 | Cmo-Chr2:5507658 | Cmo07g00971 | Cmo-Chr7:4762813 | 3.33E-162 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo02g00893 | K09872 | - | csv:101215300 | 536.954 |