Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00918 ATGGCTTTCTTTCAACCCCTTCTTACTCCGTCCGTTCATTGTTCATTAACTCTTTTTCTCTTTTTCCTTGTCGTCGTACCATTGCTTCCTCCCGCCGCTCCCATGCCTTTGCACGAAGTTTACTCTCCTCGCTTGGCCTATAGGGGTCCGGTTATTCCGGTCAGCAATCTCGTCAAGTTTCTCGAGCGTCTTCAGGTTGTGGCGCTCAATTCCTTTGGTAAACTTGATTTCGATCTTAAATATTACGTCGATTTGTCGCTTAAATTTGATTTGAATTCCACTGAGAGGGCTTTTGATGCCCTTTCACGATCCTCCAATGGCTCTGTCCCGGTCGAGGATTTGAAGTCGTTTATTAGCGAGTATTTCGATAGTGCTGGAACCGATATGGTGTACTCCGACCCTCTGGATTTTGTCCCTCGGCCTCAAGGGTTTTTGCCGAAGGTGGAGAATGCGGGGGTTAGAGCTTGGGCTTTGGAGATTCATAATTACTGGAAGAATCTTAGTCGGAAAGTCTCCGATGATATCATTCATCGCCCCGATGCTCACACTCTGCTGCCGTTGCCTATGCCCTGTATCATTCCCGGAGCCAGATTCCGGGAAGTTTACTATTGGGATTCCTATTGGATTATCAGAGGATTGTTAGCTAGTAAAATGTATGATACTGCCAAGGGAATTGTTATCAATCTCATTTCAATGATTGATGAATTTGGCCATGTTTTGAATGGTGCTAGAGCTTATTACACTAACAGAAGTCAGCCTCCTCTCTTGAGTTCCATGGTTTATGACATATACCTTAGAACAGGTGATTTAGAGTTCGTGAGGAATTCCCTCCCAGCTTTGATCAAAGAGCATATGTTCTGGAATTCAGGATTCCATTCTGTTACCGTCCGGAAGGCTCCTGGTGGAAATCATTCTTTGTCTAGATATTATGCAATGTGGAATGAACCCAGGCCTGAATCTTCTCTGCTGGATGAGAAACTTGCCTCAAAGTTTGTGAATAACTACGACAAGCAGCGTCTATACCGTGAACTCGCATCGGCTGCCGAATCTGGTTGGGATTTCAGTTCAAGATGGATGAGGGATCACACGGACTTATCAACATTGGCTACAACTTCAATCTTGCCAGTTGATCTCAATGTATTCATACTCAAGATGGAACTTGACATCTCCAATTTGGCAAGAGCTGCTGGAGATTTCTGCCTTGCTTATAAATTTTTGGAGGCTTCACTAGTCAGAAAGAAGACAATCAACTCTATTTTCTGGAACTCAGAGAAGGGACAATGGCTTGATTACTGGCTTGATAATGGCTCTCACAAGGGTGTTCATACATGGGATGCTCAGAACCAGAACAAGAACATATATGCTTCGAACTTCATTCCGCTCTGGATCGAATCGTTCTACAACGACAGCATACAGATGAAGAAAGTGTTGAAAAGCTTACGGAAGTCAGGCTTGCTATGCAATGCCGGGATTGCAACTTCTACTATTAATTCAGGAGAACAATGGGATTTCCCGAATGGTTGGGCGCCAATTCAGCACATGATCATCGAGGGACTGGCGAGATCGGAGTTGAAAGAAGCAAGGGTATTGGCTGAGGATATGGCCGTGAGATGGCTTCGAACCAACTATGTGGCTTACAAGAAAACAGGGTATATGCATGAGAAATATGATGTCCAAAAGTGTGGAGACTTCGGCGCAGGAGGTGAATATGTCCCTCAGACTGGTTTTGGATGGTCAAATGGAGTTGTTTTGGCATTCCTTGAAGAGTTTGGATGGCCCGAAGATCAAAATATTGACTGCTAA 1803 44.48 MAFFQPLLTPSVHCSLTLFLFFLVVVPLLPPAAPMPLHEVYSPRLAYRGPVIPVSNLVKFLERLQVVALNSFGKLDFDLKYYVDLSLKFDLNSTERAFDALSRSSNGSVPVEDLKSFISEYFDSAGTDMVYSDPLDFVPRPQGFLPKVENAGVRAWALEIHNYWKNLSRKVSDDIIHRPDAHTLLPLPMPCIIPGARFREVYYWDSYWIIRGLLASKMYDTAKGIVINLISMIDEFGHVLNGARAYYTNRSQPPLLSSMVYDIYLRTGDLEFVRNSLPALIKEHMFWNSGFHSVTVRKAPGGNHSLSRYYAMWNEPRPESSLLDEKLASKFVNNYDKQRLYRELASAAESGWDFSSRWMRDHTDLSTLATTSILPVDLNVFILKMELDISNLARAAGDFCLAYKFLEASLVRKKTINSIFWNSEKGQWLDYWLDNGSHKGVHTWDAQNQNKNIYASNFIPLWIESFYNDSIQMKKVLKSLRKSGLLCNAGIATSTINSGEQWDFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCGDFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNIDC 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5646854 5650606 + CmoCh02G009180.1 Cmo02g00918 376515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00918 600 Pfam Trehalase 75 591 IPR001661 GO:0004555|GO:0005991
Cmo02g00918 600 Gene3D - 63 599 IPR012341 GO:0005975
Cmo02g00918 600 ProSitePatterns Trehalase signature 2. 501 510 IPR018232 GO:0004555|GO:0005991
Cmo02g00918 600 SUPERFAMILY Six-hairpin glycosidases 72 593 IPR008928 GO:0005975
Cmo02g00918 600 PANTHER TREHALASE 64 600 - -
Cmo02g00918 600 PRINTS Glycosyl hydrolase family 37 signature 236 254 IPR001661 GO:0004555|GO:0005991
Cmo02g00918 600 PRINTS Glycosyl hydrolase family 37 signature 306 323 IPR001661 GO:0004555|GO:0005991
Cmo02g00918 600 PRINTS Glycosyl hydrolase family 37 signature 341 358 IPR001661 GO:0004555|GO:0005991
Cmo02g00918 600 PRINTS Glycosyl hydrolase family 37 signature 373 390 IPR001661 GO:0004555|GO:0005991
Cmo02g00918 600 PRINTS Glycosyl hydrolase family 37 signature 416 432 IPR001661 GO:0004555|GO:0005991
Cmo02g00918 600 PRINTS Glycosyl hydrolase family 37 signature 494 510 IPR001661 GO:0004555|GO:0005991
Cmo02g00918 600 PRINTS Glycosyl hydrolase family 37 signature 574 587 IPR001661 GO:0004555|GO:0005991
Cmo02g00918 600 PANTHER TREHALASE 64 600 IPR001661 GO:0004555|GO:0005991
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00918 K01194 - csv:101208719 1023.08