Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00969 ATGAGTTCCCATACTTCCTCTGAAGATTGTCTCGGTTGGGCCGCAAGAGATCCGTCTGGATTTCTGTCTCCTTATAAATTCAGTCGTAGGGTTCCTGGAGATGATGATGTTTCAATTACAATAACACATTGCGGAATTTGTTATGCAGACGTATTATGGACAAGAAATAAATTAGGAGATTCAAAATATCCTTTGGTGCCTGGACATGAGATTGCAGGAATTGTGAAAACTGTTGGCGCAAATGTTCACCGATTTAAAGTTGGAGATCATGTTGGGGTAGGAACTTACGTGAATTCTTGCAGACAATGCGAGTATTGTGAAGATGGTCAAGAAGTTTGTTGCACGGGTGGATCCACTAATACTTTTAATGGAATTGATTTTGACGGTACAATTACAAAGGGAGGATATTCTAACTACATAGTTGTCCATGAGAGATACTGCTACAGAATTCCTGAGAATTATCCTTTAGCTTCAGCTGCTCCTTTGCTTTGTGCTGGAATTACAGTTTATTCTCCAATGATTCGTCATAAGATGAATCAACCTGGTAAATCTCTAGGAGTGATTGGTCTTGGTGGTCTCGGCCACTTGGCAGTGAAGTTCGGGAAGGCTTTTGGACTAAATGTGACAGTTTTTAGCACTAGCATATCCAAGAAAGAAGAAGCCCTGAGCGTTCTTGGAGCAGACAAATTTGTTCTCTCATCTGATACCGAGCAAATGGAGGCCTTGTCTAAGTCCCTTGACTTCATTATCGATGCTGCATCTGGTGATCATCCATTTGATCCATACATGTCTACATTGAAGGTTGGTGGCACTATGGTTCTGGTTGGGTTTCCTTCTCAAGTCAAATTCAGTCCTGCAAGCCTAAATTTGGGTATGAGAACTATTTCTGGGAGCGTAACTGGAGGCACTCGAGTGACCCAAGAAATGATCAACTTCTGTGCTGCTCATGGAATCTATCCAAACATTGACGTGATTCCAATTCAATACTCTAATGAAGCCATTGAAAGGGTAATAAAAAACGATGTCAAGTACCGATTTGTAATTGATATTCAAGGCTCCCTAAAATGA 1068 41.01 MSSHTSSEDCLGWAARDPSGFLSPYKFSRRVPGDDDVSITITHCGICYADVLWTRNKLGDSKYPLVPGHEIAGIVKTVGANVHRFKVGDHVGVGTYVNSCRQCEYCEDGQEVCCTGGSTNTFNGIDFDGTITKGGYSNYIVVHERYCYRIPENYPLASAAPLLCAGITVYSPMIRHKMNQPGKSLGVIGLGGLGHLAVKFGKAFGLNVTVFSTSISKKEEALSVLGADKFVLSSDTEQMEALSKSLDFIIDAASGDHPFDPYMSTLKVGGTMVLVGFPSQVKFSPASLNLGMRTISGSVTGGTRVTQEMINFCAAHGIYPNIDVIPIQYSNEAIERVIKNDVKYRFVIDIQGSLK 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5943970 5948756 - CmoCh02G009690.1 Cmo02g00969 376566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00969 355 Gene3D - 13 350 - -
Cmo02g00969 355 SUPERFAMILY GroES-like 16 183 IPR011032 -
Cmo02g00969 355 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 185 212 IPR029752 -
Cmo02g00969 355 Gene3D - 165 320 - -
Cmo02g00969 355 CDD CAD1 12 349 - -
Cmo02g00969 355 PANTHER ALDEHYDE REDUCTASE 2 354 - -
Cmo02g00969 355 SMART PKS_ER_names_mod 20 306 IPR020843 GO:0016491
Cmo02g00969 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Cmo02g00969 355 Pfam Zinc-binding dehydrogenase 192 313 IPR013149 -
Cmo02g00969 355 Pfam Alcohol dehydrogenase GroES-like domain 35 149 IPR013154 -
Cmo02g00969 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Cmo02g00969 355 PANTHER - 2 354 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00969 Cmo-Chr2:5943970 Cmo20g01090 Cmo-Chr20:10384192 1.76E-119 dispersed
Cmo02g00969 Cmo-Chr2:5943970 Cmo16g00363 Cmo-Chr16:1669071 1.61E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00969 K00083 - csv:101211438 652.514