Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g00975 ATGGAACCCGCTGCAGAACCTGGATCCGGATCCGGATCCGGATTGGAATTACCTCCATCTCAATCTCAATTTACTGTTTCGCCGCCGGATATCACCACTCCGTCCTTGACTGTAGACGCCACAACCGATTCTCAACATGTCGAAGTTGCTTCGCCGATTAGTAGTCGTCCTCCTGCATCGTCTTCCTTGAATTATGAGGAAATCTTTCGTCTCTCCACTACTGTCCAGATGCCGGTCGTCGGCGATGATGAAGGACTTGCCGGAGATGATGCCGACCGAACAACCGGTAGTAGCGGCGCTGGTAATCGATGGCCTCGTCAGGAAACTCTAGCGCTGCTTAGAATTAGGTCAGATATGGATTCCGCTTTCCGTGATGCGACACTCAAAGGTCCTCTCTGGGATGAAGTTTCCAGGAAGCTAACGGAATTGGGTTACAACAGAAGCGCCAAAAAATGCAAAGAGAAATTCGAGAACGTTCAGAAATATTACAAGCGCACTAAAGAAGGCCGTGGTGGCCGTCAAGATGGCAAAACCTACAAATTCTTCACACAACTTGAGGCACTTCACAACGCCTCCGCCTCCGCCTCCGCCTCCGCCGCGGCATCTACTCCCAACGTGGCGGTTTCTTGTTTCTCAGCGCCGCCCATTGGTTTTGGAATTAGTAACCCAACTCCAATCTCATCTGTCAAAATCTCTTCTACTGTTATTTCCTCACAGACCCCAATGGGAATCTATTCACCTGCTGACCATTTCACCGTCAGGCCACCGCCTGTGACCGCTCCTATGGGTGTCAGCTTTTCGTCGAACACCTCGTCTGCATCCACGGAGGAGGATGATGACGATGAAGAAGAGATGGGGTTTGATGTTGACCTTGAAGGGGAGCCGTCGAGTGTCGCCGGAACCAGTCGGAAGCGGCGGAGGGGGGTGGTTAAGGGAAGTGGGTCGAAAACCCATAAGATGATGATGGAGTTTTTTGAGGGTTTGATGAAGGAAGTGATGCATAAACAGGAGGTTATGCAGCAGAAGTTTCTTGAAGCGATGGGGAAGAGAGAGCAGGATAGAATGATTAGAGAAGAGACGTGGAAAAGGCAAGAAATGGCTAGATTGAGCCGAGAGCAAGAGAGAATGGCACAAGAACGGACAATTTCTGCTTCTAGGGATGCCGCTATCATTGCTTTTCTTCAGAAATTTACTGGCCAAACCATTCAATTACCTGTGGTGAATATCCCTTCTTCTGTAGCCCCACACCACCAACATCAACAACATGATGTGCCTGTGCCTATGCCTGTGCCTGTCCCAGTGTCAGTGCCCGTGCCATTATCTCCTGTCCCCCCTCCGCCATTGCAACCACAAACAGCTCTGTCACTGCAGCAAAATAAAAAAACCGCCCAGGATCAGAATCCGCCGCCTTCAAATACACTGTCGCCATTGGATCAGCCAATGCCATATCAGGAAATCAGCCAAGGGGGAGATGGGAGTGCCGAACCCTTCTCTTCAAGATGGCCAAAACAAGAAGTTCTAGCTCTGATTAAGCTGAGAGGTGGGCTTGAAACGAGGTATCAAGAGACAGGTCCAAAGGGTCTTCTCTGGGAAGAAATATCAGCTGGAATGCAACGGATGGGTTACAAGAGAAGCGCCAAAAGATGCAAGGAGAAATGGGAAAACATCAATAAGTACTTCAAGAAGGTTAAAGAAAGCAACAAAAAACGCCGCGAGGATTCTAAAACCTGCCCCTATTTCAACGAACTCGACGCCCTTTACCGCAAAAAGATCCTCGGCAGCAGCAGCGGCGGCGGTGGTTCTGATGGCGGTGGTAGTGGCAGTAGAAGCTCGTTCAGCGACACGAGCAAAACCGAACAAGACCCCATTAAGAATATGGACACGAAAATGGCCCTATCAACAGCTACAGAAACTTCTCAAACCATACTCACTGAAGGCCTATCCGCAAGCCTCTTCGGTGAAGGAACTGAAGAACAACCAGCAACATCCACGAAGCCAGAAGACATTGTGAATGAGCTGATGGAGCTGCATGAGCTCTACCGACCTGATAGCAACAATGAAGAAGAGTATTGCAGCGAAGATGAGGATGATACACCAGACAACGACGACAAGGACAAGAACAAGAACACGAAGAACACGAAGAACATGGATTACAAAATAGAGTTTGAGAGAAGAAATGCAGGGAGCTCCAATGGCGTGGGGAATGAGTTTCAGTCAATGGCGGTGGTTCAATAG 2235 49.35 MEPAAEPGSGSGSGLELPPSQSQFTVSPPDITTPSLTVDATTDSQHVEVASPISSRPPASSSLNYEEIFRLSTTVQMPVVGDDEGLAGDDADRTTGSSGAGNRWPRQETLALLRIRSDMDSAFRDATLKGPLWDEVSRKLTELGYNRSAKKCKEKFENVQKYYKRTKEGRGGRQDGKTYKFFTQLEALHNASASASASAAASTPNVAVSCFSAPPIGFGISNPTPISSVKISSTVISSQTPMGIYSPADHFTVRPPPVTAPMGVSFSSNTSSASTEEDDDDEEEMGFDVDLEGEPSSVAGTSRKRRRGVVKGSGSKTHKMMMEFFEGLMKEVMHKQEVMQQKFLEAMGKREQDRMIREETWKRQEMARLSREQERMAQERTISASRDAAIIAFLQKFTGQTIQLPVVNIPSSVAPHHQHQQHDVPVPMPVPVPVSVPVPLSPVPPPPLQPQTALSLQQNKKTAQDQNPPPSNTLSPLDQPMPYQEISQGGDGSAEPFSSRWPKQEVLALIKLRGGLETRYQETGPKGLLWEEISAGMQRMGYKRSAKRCKEKWENINKYFKKVKESNKKRREDSKTCPYFNELDALYRKKILGSSSGGGGSDGGGSGSRSSFSDTSKTEQDPIKNMDTKMALSTATETSQTILTEGLSASLFGEGTEEQPATSTKPEDIVNELMELHELYRPDSNNEEEYCSEDEDDTPDNDDKDKNKNTKNTKNMDYKIEFERRNAGSSNGVGNEFQSMAVVQ 744
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6010106 6013631 - CmoCh02G009750.1 Cmo02g00975 376572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g00975 744 SMART sant 497 559 IPR001005 -
Cmo02g00975 744 SMART sant 100 162 IPR001005 -
Cmo02g00975 744 ProSiteProfiles Myb-like domain profile. 102 160 IPR001005 -
Cmo02g00975 744 MobiDBLite consensus disorder prediction 14 63 - -
Cmo02g00975 744 MobiDBLite consensus disorder prediction 262 315 - -
Cmo02g00975 744 MobiDBLite consensus disorder prediction 441 499 - -
Cmo02g00975 744 MobiDBLite consensus disorder prediction 670 687 - -
Cmo02g00975 744 MobiDBLite consensus disorder prediction 728 744 - -
Cmo02g00975 744 MobiDBLite consensus disorder prediction 627 647 - -
Cmo02g00975 744 MobiDBLite consensus disorder prediction 599 619 - -
Cmo02g00975 744 MobiDBLite consensus disorder prediction 452 482 - -
Cmo02g00975 744 MobiDBLite consensus disorder prediction 594 744 - -
Cmo02g00975 744 MobiDBLite consensus disorder prediction 274 290 - -
Cmo02g00975 744 CDD GT1 499 564 - -
Cmo02g00975 744 CDD GT1 102 167 - -
Cmo02g00975 744 Gene3D - 501 562 - -
Cmo02g00975 744 Gene3D - 104 165 - -
Cmo02g00975 744 Pfam Myb/SANT-like DNA-binding domain 102 188 IPR044822 -
Cmo02g00975 744 Pfam Myb/SANT-like DNA-binding domain 499 586 IPR044822 -
Cmo02g00975 744 MobiDBLite consensus disorder prediction 1 63 - -
Cmo02g00975 744 PANTHER - 43 599 - -
Cmo02g00975 744 MobiDBLite consensus disorder prediction 80 103 - -
Cmo02g00975 744 ProSiteProfiles Myb-like domain profile. 499 557 IPR001005 -
Cmo02g00975 744 MobiDBLite consensus disorder prediction 701 724 - -
Cmo02g00975 744 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 43 599 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00975 Cmo15g01408 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00975 Cmo-Chr2:6010106 Cmo20g01084 Cmo-Chr20:10264768 2.65E-21 dispersed
Cmo10g00066 Cmo-Chr10:301666 Cmo02g00975 Cmo-Chr2:6010106 1.35E-09 dispersed
Cmo10g01061 Cmo-Chr10:5642059 Cmo02g00975 Cmo-Chr2:6010106 3.76E-07 dispersed
Cmo11g00043 Cmo-Chr11:177786 Cmo02g00975 Cmo-Chr2:6010106 2.88E-10 dispersed
Cmo15g01408 Cmo-Chr15:9597606 Cmo02g00975 Cmo-Chr2:6010106 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
9269 PF13837 Myb_DNA-bind_4 4.00E-22 CL0123 Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g00975 - - cpep:111795959 1220.3