Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo02g00977 | ATGCCGGAATCGGAAAGTGGAACGCCGGTGCCGTCGGCTCCGGCCACGCCGGGGACGCCGGGAGGGCCGCTGTTTTCTGGCTTGCGGGTGGATTCGTTGTCGTACGATCGGAAGTCAATGCCGCGGTGTAAGTGCTTGCCCGTGAATGCTCCCACGTGGGGCCAGCCTCACACGTGCTTCACTGACTTTCCTGTTCCTGATGTTTCTCTCACCCGCAAGTTGGGAGCAGAATTCGTGGGAACATTCATCCTGATATTTGCGGCGACGGCAGGACCCATTGTGAATCAGAAGTACAACGGCGCCGAGACTCTGATCGGAAACGCTGCGTGTGCCGGGCTGGCCGTAATGATCGTAATTCTGTCGACTGGACACATCTCCGGCGCCCACCTAAACCCATCGCTCACCATTGCCTTCGCCGCTCTCCGCCACTTCCCATGGGTCCAAGTCCCTGCCTACATCGCTGCTCAGGTCTCTGCTTCCATTTGCGCCTCTTTTGCTCTTAAAGGTGTTTTTCACCCTTTCATGTCTGGCGGCGTCACCGTCCCCTCTGTCAGCACCGGCCAAGCCTTCGCTCTTGAATTCTTTATCACTTTCAATCTCTTGTTCGTTGTCACCGCCGTCGCAACCGATACTCGAGCGGTGGGAGAGTTGGCTGGGATTGCAGTTGGAGCTACAGTTATGGTGAACATTCTTGTGGCCGGGCCCTCAAGTGGTGGTTCCATGAACCCTGTTCGAACATTGGGCCCCGCCGTGGCTGCCGGAAATTACAGAGCATTATGGGTGTATCTAGTGGCACCAACGCTGGGAGCCATCGTCGGCGCGGGAACTTACACCGCTGTGAAGCTGCGAGACGACGAAGTGGATGCTCCGTCTCAGGTGAGGAGCTTCCGCCGCTGA | 897 | 57.75 | MPESESGTPVPSAPATPGTPGGPLFSGLRVDSLSYDRKSMPRCKCLPVNAPTWGQPHTCFTDFPVPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYNGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWVQVPAYIAAQVSASICASFALKGVFHPFMSGGVTVPSVSTGQAFALEFFITFNLLFVVTAVATDTRAVGELAGIAVGATVMVNILVAGPSSGGSMNPVRTLGPAVAAGNYRALWVYLVAPTLGAIVGAGTYTAVKLRDDEVDAPSQVRSFRR | 298 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 6022903 | 6025992 | - | CmoCh02G009770.1 | Cmo02g00977 | 376574 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo02g00977 | 298 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Cmo02g00977 | 298 | PRINTS | Major intrinsic protein family signature | 192 | 210 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo02g00977 | 298 | PRINTS | Major intrinsic protein family signature | 260 | 280 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo02g00977 | 298 | PRINTS | Major intrinsic protein family signature | 111 | 135 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo02g00977 | 298 | PRINTS | Major intrinsic protein family signature | 148 | 167 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo02g00977 | 298 | PRINTS | Major intrinsic protein family signature | 223 | 245 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo02g00977 | 298 | PRINTS | Major intrinsic protein family signature | 72 | 91 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo02g00977 | 298 | SUPERFAMILY | Aquaporin-like | 69 | 286 | IPR023271 | - | |
Cmo02g00977 | 298 | Pfam | Major intrinsic protein | 68 | 277 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo02g00977 | 298 | Gene3D | Glycerol uptake facilitator protein. | 64 | 292 | IPR023271 | - | |
Cmo02g00977 | 298 | PANTHER | AQUAPORIN NIP2-1 | 11 | 296 | IPR034294 | - | |
Cmo02g00977 | 298 | ProSitePatterns | MIP family signature. | 129 | 137 | IPR022357 | - | |
Cmo02g00977 | 298 | PANTHER | AQUAPORIN NIP5-1 ISOFORM X1-RELATED | 11 | 296 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo02g00977 | Cmo15g01411 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00977 | Cmo-Chr2:6022903 | Cmo03g01346 | Cmo-Chr3:9977225 | 1.85E-71 | dispersed | |
Cmo01g00187 | Cmo-Chr1:811419 | Cmo02g00977 | Cmo-Chr2:6022903 | 2.50E-126 | transposed | |
Cmo04g00667 | Cmo-Chr4:3315281 | Cmo02g00977 | Cmo-Chr2:6022903 | 5.16E-107 | transposed | |
Cmo15g01411 | Cmo-Chr15:9615452 | Cmo02g00977 | Cmo-Chr2:6022903 | 1.19E-137 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo02g00977 | K09874 | - | csv:101212651 | 566.614 |