Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01058 ATGCCCATGATGATTGGTGAAAGACTGGCTCTAGAGGGCTACTTGGACGCTGTCCAACAAGGACTGGTGCCCCCAATGACATCTTCTAGGGTGGCTGGAGGATTAGCCCAATCTTCCTCAAACTCTGGGATTTTTTTCCAAGGAGATGGGCAGTCAAAGGGCAATGTTAAATCTCACTTGGTCTCATCTTATGGAAACTCATCAAATTCAATTCCAGGACCTGGCCACTCAAATTTGGGTCCAGTTTCTGGGGACACGAATAATGTAGTGTTAAATAGTGTGGCAAACTCAGGAATAAGTGTTGGGGCAAGTTCGTTGGTTACAGATGCAAACTCTGCACTCTCAGGTAGGCCTCATTTGCAGAGAAGTCCAAGCATGAATGCTGAATCATACATGCGATTACCTACTTCGTCTATGTCTTTTACATCAAATAACGTGAGTCTCTCGGGTGCATCACTCATTGATGCATCTTCTACAGTTCAGCACAATTCTCAGCAGGATCATAACGCCCCACAATTGTTGCAGACCCAACCACAGTCCCAACAAGTTGCTCCAGGTGATGCATCATTGTCAAATTCACAAACCGTCCAAGCTTCTCTACCCGTGGGTGCACGTGTTGCTGGATCTCTCATGACAGATCCCAACAGTTATTCTCAGTCACAGAAGAAACCACGCTTGGATATTAAGCAGGATGATTTCCTGCAACAGCAGATGCTACAACAGCTCCTGCAGAGACAAGATTCCATGCAGCTGCAAGGTCGTAATACGCCGCAGTTACAAGCAGCATTATTTCAGCAGCAACAGAGATTACAGCAACAGCAACAGATTTTTCAGTCTTTGCCTCCTTTGCAGAGAGCTCACCTGCAGCAGCAGCAGCAGATACACTTGAGACAGCAGCTTCAACAACAGGCAATACAACCCATAAATGCTATGAAGCGGACTAATGATGGTGGTGTATGTGCTCGGCGGCTAATGCAGTATCTATACCATCAGCGTCAAAGACCTGCTGATAATAGTATTGCCTATTGGAGGAAGTTCGTGACAGAATATTATTCCCCTCGTGCAAAGAAAAGATGGTGTTTGTCACTATATGACAATGTTGGTCATCATGCTCTAGGCGTTTTCCCTCTAGCAGCTATGGATGCATGGCAGTGTGAAATTTGTGGTTCAAAGTCTGGGCGGGGATTTGAGGCTTCCTTTGAAGTGCTTCCTAGACTCAATGAGATCAAATTTGGCAGTGGAGTCATTGATGAGCTATTGTTCTTGGATATGCCACGGGAGTTCAGATATTCGTCTGGAATTATGATGTTAGAATATGGAAAAGCAGTTCAAGAGAGTGTATATGAGCAACTTCGTGTTATTCGCGAGGGTCACCTTCGTATCATATTTACTCATGAATTGAAGATATTGGCATGGGAATTTTGTGCAAGACGTCATGAAGAACTTCTACCTCGTAGGTTGGTTGCACCTCAGGTGAATCAGTTGGTCCAGGTGGCACAGAAATGCCAGAGCACTATTGCTGAAGGAGGATCCGATGGGGCTTCTCAGCAGGATTTACAAGCAAACAGTAATATGGTTTTGACAGCTGGGCAGCAGCTCGCTAAGAGTCTGGAGTTGCAGTCACTTAATGATTTGGGGTTCTCCAAAAGATACGTTAGATGCTTGCAGATATCAGAGGTCGTCAACAGCATGAAAGATCTGATTGATTTCTGTAGGGTGCAGAAAACCGGACCAGTTGAGGGTCTGAAAAGTTATCCTCAGCACGCCACAGCCAAGCTGCGGATGCAAAAAAGGCAAGAGATTCAACAGGTCGCTACTGCTCAAGGTCTGCCAACCGACCGCAATAGGATGCTCGCCCTGCATCCTGGGCTGATGAACAACCAAATGAATAGCCAAAATCAAGTAATCGGCAGAGGAGCTTTGAGCAGTTCGGCCCAAGCCGCTTTGGCATTGTCTAACTACCAGAATCTGCTTATGAGACAGAATTCAATGAATTCAAACAGTTCAAACCCGCTTCAGCAGGGGACATCATCATCCTTCAATAACTCAAACCAAAACCAGAGTCCTTCATCAAGCTCTCATGGTGGGACAACTGCTTTGACATCAGGACCGATGCGAAACGTGCTCGGCAGTGCTCTTTCAAGTCCTCATTTACCTTCACAACAATCCAACAACTTAGTTGCGCAAAACCATCCTCAGAGCGCTCAAGGTAGCGGCAACAATAATCAGGCCATGCAACATCAGATGATCCAGCAGCTTCTCCAGATATCTAATAATAACAACAGTGGGGGAGGGCAACAGCAGCCACTTCCTGGTTCGAACACGAACACGAACGGAAAGATGGGGGGGTCTTATTCAGGGTTCGGCGGCAGTTCTTCAGCAGCTTCTGGCACAGCCAATGCATCCATCAGTAATAATACGCCGCCTGCCCCGAGCCGGAGTAACAGCTTCAAAAGCGCTTCAAATGGTGATGTATCAGCAACTGGAGGTCATAGCAGTGGGTTCAACCAAAAAAGTGGAGACTTGCCGCAAAATCTTCATTTAGAAGAGGACATAATCCAGGATATAGCCCATGATTTTACAGAAAATGGGTTTTTTAACAGTGATCTTGACGATAATATGTGCTTCGCCTGGAAAGTTCAACTAACTTAA 2652 45.97 MPMMIGERLALEGYLDAVQQGLVPPMTSSRVAGGLAQSSSNSGIFFQGDGQSKGNVKSHLVSSYGNSSNSIPGPGHSNLGPVSGDTNNVVLNSVANSGISVGASSLVTDANSALSGRPHLQRSPSMNAESYMRLPTSSMSFTSNNVSLSGASLIDASSTVQHNSQQDHNAPQLLQTQPQSQQVAPGDASLSNSQTVQASLPVGARVAGSLMTDPNSYSQSQKKPRLDIKQDDFLQQQMLQQLLQRQDSMQLQGRNTPQLQAALFQQQQRLQQQQQIFQSLPPLQRAHLQQQQQIHLRQQLQQQAIQPINAMKRTNDGGVCARRLMQYLYHQRQRPADNSIAYWRKFVTEYYSPRAKKRWCLSLYDNVGHHALGVFPLAAMDAWQCEICGSKSGRGFEASFEVLPRLNEIKFGSGVIDELLFLDMPREFRYSSGIMMLEYGKAVQESVYEQLRVIREGHLRIIFTHELKILAWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAEGGSDGASQQDLQANSNMVLTAGQQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDFCRVQKTGPVEGLKSYPQHATAKLRMQKRQEIQQVATAQGLPTDRNRMLALHPGLMNNQMNSQNQVIGRGALSSSAQAALALSNYQNLLMRQNSMNSNSSNPLQQGTSSSFNNSNQNQSPSSSSHGGTTALTSGPMRNVLGSALSSPHLPSQQSNNLVAQNHPQSAQGSGNNNQAMQHQMIQQLLQISNNNNSGGGQQQPLPGSNTNTNGKMGGSYSGFGGSSSAASGTANASISNNTPPAPSRSNSFKSASNGDVSATGGHSSGFNQKSGDLPQNLHLEEDIIQDIAHDFTENGFFNSDLDDNMCFAWKVQLT 883
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6446630 6451071 - CmoCh02G010580.1 Cmo02g01058 376655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01058 883 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 30 179 - -
Cmo02g01058 883 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 204 879 - -
Cmo02g01058 883 MobiDBLite consensus disorder prediction 175 194 - -
Cmo02g01058 883 MobiDBLite consensus disorder prediction 56 84 - -
Cmo02g01058 883 MobiDBLite consensus disorder prediction 757 842 - -
Cmo02g01058 883 Pfam LIM-domain binding protein 323 583 IPR029005 -
Cmo02g01058 883 PANTHER LIM DOMAIN-BINDING PROTEIN 30 179 IPR029005 -
Cmo02g01058 883 MobiDBLite consensus disorder prediction 662 742 - -
Cmo02g01058 883 PANTHER LIM DOMAIN-BINDING PROTEIN 204 879 IPR029005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01058 Cmo-Chr2:6446630 Cmo16g00152 Cmo-Chr16:686930 0 dispersed
Cmo15g01487 Cmo-Chr15:10080984 Cmo02g01058 Cmo-Chr2:6446630 0 wgd
Cmo18g01248 Cmo-Chr18:12272278 Cmo02g01058 Cmo-Chr2:6446630 3.36E-128 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01058 - - bhj:120092747 1205.66