Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01064 ATGAAGCTCATCCCCTTCCTTCCATGGCCGAACCTCCTCCTCCACATGGCCTTCCTCATCCTCCTCTTCTCATTTTCTTCTCCCCTGTTTCGTTCTTCCATGGCTTCTTCACTTCCTCAGGATGAAGGACGAGCTCTAATGTCAATCAAAGCCTCGTTTAGCAATGTAGCTAATGTGTTGCTCGATTGGGATGATGATCATAACAACGATTTCTGTTCATGGCGTGGGGTTTTCTGCGACAATCTTAGTCTTTCGGTTGCTGCTCTGAACTTGTCCAACTTGAATCTGGGTGGGGAGATTTCACCAGCCATCGGAGATTTAAGAAACTTACAGTCAATTGATTTTCAAGGAAACAAACTGACGGGACAAATCCCTGATGAGATTGGTAACTGTGGTCGTCTTGTTCATTTGGATTTATCTGATAATTTGCTCTATGGGGACGTCCCCTTCACTGTTTCCAAGCTGAAGCTGCTTGAGTTCTTAAATCTGAAGAACAATCAGTTGACTGGCCCAATCCCTTCTACTCTTACTCAGATTCCTAATCTGAAAACTCTTGATCTTGCACGAAACCTGCTTACTGGAGAGATTCCTAGGCTAATCTATTGGAATGAAGTACTGCAATATCTTGGGTTACGAGGGAACTTCTTGACGGGGTCGCTGTCGTCCGATATGTGTCAGCTGACTGGCTTGTGGTACTTTGATGTAAGAGGGAACAATTTGACTGGAACTATACCTGATAGCATAGGGAACTGTACAAGTTTTGAAATTCTGGATATATCCTACAACCACATCTCAGGGGAGATTCCTTACAACATTGGATTTCTTCAAGTAGCCACTTTATCATTACAGGGAAACAGGTTGACTGGTAAGATTCCCAATGTCATTGGATTGATGCAGGCCCTTGCAGTCCTGGATTTGAGTGAGAATGAGCTTGAAGGGCCAATTCCCCCAATATTTGGCAACTTATCCTACACAGGGAAACTATACCTACACGGAAACAAGTTGACCGGGCCGATACCCCCCGAGCTCGGCAATATGTCAAAGCTTAGCTACCTGCAACTAAATGATAATCAACTAACGGGAACAATTCCATTTGAACTTGGAAAATTGGATCAATTGTTTGAATTGAATCTAGCTAACAATTACCTTGAAGGACCCATTCCTCACAACATCAGTTCTTGCACTGCACTGAATCAATTTAATGTACATGGAAACCGTCTCAACGGATCGATCCCTCTCGGCTTCCAGGAACTGGAGAGCTTAACCTATTTGAATCTCTCAGCTAATAACTTCAAAGGCAGGATTCCAGTTGAGCTGGGACGCATAGTTAACCTTGATACATTGGATCTATCTCGAAACTACTTCTCGGGTCCGGTTCCTGCGTCTGTTGGTGATTTGGAACACCTTCTTATCCTAAATTTGAGTGCCAATCGACTCGTTGGGCCATTACCAGCAGAGTTTGGGAATCTTCGAAGTGTTCAAACTATTGATATGTCATTCAACAACTTTTCTGGTAGCATTCCCATGGAGTTGGGTCAGCTGCAAAACATTGTCTCCCTAATTTTGAACAACAATCATTTGCAAGGGAAGATACCTGATCAGCTGACAAATTGTTTTAGTCTTACCAATTTGAACTTGTCATACAATAATCTATCTGGTATCTTACCTCCCATGAAGAACTTCTCTCGATTCCAGCCTGATAGCTTTATTGGGAATCCTCTGCTGTGTGGAAACTGGCTGGGATTGATCTGTGGACCTTATATGGGAAAACCTCCAGTAATGTTGTCTCGGACAGCGGTTGTTTGTATGACGTTTGGATTCGTTATATTGTTGTCGGTAGTTATAATTGCCGTGTGTAAGTCGAATCCCTCGAAGCAATTGATGAAAGGTTCTAGCAAGACAGGGCAAGGTCCTCCAATTGTGGTACTTCATATGGATATGGCTATTCACACGTTCGACGACATTATGAGAACGACCGAGAATCTAAGCGAGAAATACATTATTGGCTATGGAGCTTCGAGCACTGTGTACAAATGTTCACTGAAGAATTCCCGACCTATTGCAATTAAGCGACTTTACAATCACTACGCTCACAATTTACGGGAGTTTGAGACCGAACTCGAAACCATTGGTAGTATCAGACATAGAAATCTTGTTGTACTTCATGGTTATTCATTATCTCCCTGTGGGAATCTCCTTTTCTATGACTACATGGAAAATGGTTCACTTTGGGATCTGCTTCATGGGCCAGGTAAGAAGGTTAAACTGGATTGGGAAGCACGGTTGAAGATAGCGGTCGGAGCTGCACAAGGGCTTGCATATCTTCACCACGACTGCAACCCGCGAATCATTCACCGGGACGTCAAGTCTTCGAATATTCTACTGGATGAAAACTTCGAGGCTCATCTTTCTGATTTTGGGATTGCCAAATGCATCCCAACTGCCAAAACACATGCCTCGACGTATGTGCTTGGAACAATTGGCTATATTGATCCAGAGTATGCTCGGACCTCTCGGCTGAACGAGAAATCTGATGTTTATAGCTTTGGCATTGTTCTTCTGGAACTACTGACGGGAAAGAAAGCTGTGGATAATGAGTCAAATTTGCATCAACTGATATTGTCAAAGACTGATAACAATACTGTGATGGAAGCTGTTGATCCTGAAGTTTCAGTCACATGTATGGATTCAGCTCATGTCCGGAAAACGTTCCAGCTTGCTCTCCTCTGCACAAAACACAATCAAGCGGAACGACCAACAATGCACGAAGTTGCACGAGTTTTGATCTCCCTCCAGCAACCACCTGCATTGAAACAAACTCCATTCCCTACCAAAACATTGGATTACGCACAATTCGTGATCGATAAGGGTCAGAATCAAAATGCAAAGGGACAGGAAGAGGAGGAGCAGCAGAAATCCGACGTGGATTCATCGGATGCTCGGTGGTTTGTTCGGTTTGGGGAAGTTATATCAGAACAACACAGTTTGAATCAATAG 2997 43.51 MKLIPFLPWPNLLLHMAFLILLFSFSSPLFRSSMASSLPQDEGRALMSIKASFSNVANVLLDWDDDHNNDFCSWRGVFCDNLSLSVAALNLSNLNLGGEISPAIGDLRNLQSIDFQGNKLTGQIPDEIGNCGRLVHLDLSDNLLYGDVPFTVSKLKLLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNLLTGEIPRLIYWNEVLQYLGLRGNFLTGSLSSDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNHISGEIPYNIGFLQVATLSLQGNRLTGKIPNVIGLMQALAVLDLSENELEGPIPPIFGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLNDNQLTGTIPFELGKLDQLFELNLANNYLEGPIPHNISSCTALNQFNVHGNRLNGSIPLGFQELESLTYLNLSANNFKGRIPVELGRIVNLDTLDLSRNYFSGPVPASVGDLEHLLILNLSANRLVGPLPAEFGNLRSVQTIDMSFNNFSGSIPMELGQLQNIVSLILNNNHLQGKIPDQLTNCFSLTNLNLSYNNLSGILPPMKNFSRFQPDSFIGNPLLCGNWLGLICGPYMGKPPVMLSRTAVVCMTFGFVILLSVVIIAVCKSNPSKQLMKGSSKTGQGPPIVVLHMDMAIHTFDDIMRTTENLSEKYIIGYGASSTVYKCSLKNSRPIAIKRLYNHYAHNLREFETELETIGSIRHRNLVVLHGYSLSPCGNLLFYDYMENGSLWDLLHGPGKKVKLDWEARLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILLDENFEAHLSDFGIAKCIPTAKTHASTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNESNLHQLILSKTDNNTVMEAVDPEVSVTCMDSAHVRKTFQLALLCTKHNQAERPTMHEVARVLISLQQPPALKQTPFPTKTLDYAQFVIDKGQNQNAKGQEEEEQQKSDVDSSDARWFVRFGEVISEQHSLNQ 998
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 6488469 6494706 - CmoCh02G010640.1 Cmo02g01064 376661
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01064 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 783 795 IPR008271 GO:0004672|GO:0006468
Cmo02g01064 998 SMART serkin_6 662 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g01064 998 Gene3D Transferase(Phosphotransferase) domain 1 738 941 - -
Cmo02g01064 998 ProSiteProfiles Protein kinase domain profile. 662 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g01064 998 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED 35 970 - -
Cmo02g01064 998 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 35 970 - -
Cmo02g01064 998 SMART LRR_typ_2 514 538 IPR003591 -
Cmo02g01064 998 SMART LRR_typ_2 346 370 IPR003591 -
Cmo02g01064 998 SMART LRR_typ_2 179 203 IPR003591 -
Cmo02g01064 998 SMART LRR_typ_2 418 442 IPR003591 -
Cmo02g01064 998 SMART LRR_typ_2 227 251 IPR003591 -
Cmo02g01064 998 SMART LRR_typ_2 107 131 IPR003591 -
Cmo02g01064 998 SMART LRR_typ_2 155 178 IPR003591 -
Cmo02g01064 998 SMART LRR_typ_2 466 489 IPR003591 -
Cmo02g01064 998 MobiDBLite consensus disorder prediction 958 979 - -
Cmo02g01064 998 ProSitePatterns Protein kinases ATP-binding region signature. 668 690 IPR017441 GO:0005524
Cmo02g01064 998 Gene3D Ribonuclease Inhibitor 314 586 IPR032675 -
Cmo02g01064 998 Gene3D Phosphorylase Kinase; domain 1 626 737 - -
Cmo02g01064 998 MobiDBLite consensus disorder prediction 961 979 - -
Cmo02g01064 998 Pfam Protein kinase domain 665 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g01064 998 Pfam Leucine rich repeat 444 503 IPR001611 GO:0005515
Cmo02g01064 998 Pfam Leucine rich repeat N-terminal domain 40 80 IPR013210 -
Cmo02g01064 998 SUPERFAMILY L domain-like 40 333 - -
Cmo02g01064 998 SUPERFAMILY L domain-like 319 577 - -
Cmo02g01064 998 SUPERFAMILY Protein kinase-like (PK-like) 639 929 IPR011009 -
Cmo02g01064 998 Gene3D Ribonuclease Inhibitor 39 202 IPR032675 -
Cmo02g01064 998 Gene3D Ribonuclease Inhibitor 203 313 IPR032675 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01757 Cmo-Chr1:13060288 Cmo02g01064 Cmo-Chr2:6488469 0 dispersed
Cmo02g01064 Cmo-Chr2:6488469 Cmo09g00366 Cmo-Chr9:1609331 4.51E-33 dispersed
Cmo19g00384 Cmo-Chr19:3843920 Cmo02g01064 Cmo-Chr2:6488469 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74127 PF00069 Pkinase 4.20E-41 CL0016 Cmo PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01064 K20718 - csv:101213139 1764.97