Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo02g01080 | ATGATGCCGGCGGTGAAAGCTTTTCCGTTCACCGTGATCAGTCACGGGCTCGCAGTGGTGGCGCTCATCATGGTGCTCATTTGGACCATTCACTTCAGAGGCGGCCTTGCTTGGGAGTCTGTCAATAAGAGTCTCATCTTCAACGTTCATCCTGTTTTTATGCTATTCGGATTGATCATCATAGGAGGCGAAGTAATTCGAAATAATGCGTTCAAAAATCATGCAGCAATAATCAGTTATAAATCACTGCCGTTCAGAAAAGAAGTAAAGAAGGTGATCCATCTGGCGCTAAACGGCGTCGCATTGGTTCTAGGCATTGTGGGAATCAGCGCTGCATTCAAGAACCATAACGAGAGTGGGATCGCTAATCTTTACAGCTTACATTCCTGGATTGGAATTGGCGTAATTGTCCTCTACGGCATCCAGTGGTTGTACGGATTCGTGACATTTTTCTTCCCCGGAGGGTCCGCCGATCTTCGAAGAGCGACGCTGCCATGGCACGCGCTGTTGGGCGCGTGTGTGTACGTATTGGCCGCCGCCAACTCGGCGCTTGGCTTCCTCGAGAAGCTGACGTTTCTGCAGAGCTCCGGCGTCGCCAAATACGGCACTGAGGCCTTGCTCGTCAACTTCACCGCCATCACCACCGTCGTTTTTGCAGTGTTTGTGATTTTGTCTTTAAGAGTATAA | 687 | 49.93 | MMPAVKAFPFTVISHGLAVVALIMVLIWTIHFRGGLAWESVNKSLIFNVHPVFMLFGLIIIGGEVIRNNAFKNHAAIISYKSLPFRKEVKKVIHLALNGVALVLGIVGISAAFKNHNESGIANLYSLHSWIGIGVIVLYGIQWLYGFVTFFFPGGSADLRRATLPWHALLGACVYVLAAANSALGFLEKLTFLQSSGVAKYGTEALLVNFTAITTVVFAVFVILSLRV | 228 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 6577235 | 6580357 | - | CmoCh02G010800.1 | Cmo02g01080 | 376677 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo02g01080 | 228 | SMART | 561_7 | 49 | 186 | IPR006593 | - | |
| Cmo02g01080 | 228 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 227 | IPR006593 | - | |
| Cmo02g01080 | 228 | PANTHER | CYTOCHROME B561-RELATED | 3 | 225 | IPR043205 | GO:0016491 | |
| Cmo02g01080 | 228 | PANTHER | TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 1 | 3 | 225 | - | - | |
| Cmo02g01080 | 228 | Pfam | Eukaryotic cytochrome b561 | 49 | 192 | IPR006593 | - | |
| Cmo02g01080 | 228 | CDD | Cyt_b561_ACYB-1_like | 40 | 194 | - | - | |
| Cmo02g01080 | 228 | Gene3D | - | 1 | 227 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo02g01080 | Cmo-Chr2:6577235 | Cmo15g00206 | Cmo-Chr15:986101 | 1.15E-57 | dispersed | |
| Cmo19g00423 | Cmo-Chr19:5077696 | Cmo02g01080 | Cmo-Chr2:6577235 | 6.44E-117 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo02g01080 | K08360 | - | csv:101209308 | 334.724 |