Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01087 ATGTTGGTTGAAGAAGCTTTTGGGTTAGTGATAATGGCGTTCTTGACTTCCTTGCTCTTCAAGATATTGTTTTCTTGTTGGATTTCACCATTTTTAGCCCACAAAAAGCTCAAGCGAAATGGGTTTCGAGGTCCGACCCCGAGTTTTCCTCTCGGGAATATTAGCGAGATGAAAAGGACAAGCTTTGATCGTGTGTTTGAGTCTTTGACGCATGATATACATTCCATTGTGTTTCCGTACTTTTCTCGGTGGCAAGCTGCCCATGGTTGGTGGAAAGTATTTACGTATTGGTTAGGGACGGAGCCGTTCTTGTACGTTGCAGAGCCGGAGTTTGTGAAGATGTTGTCGAGGGAAGTGCAAGCTAAGTACTGGGGGAAGCCGTCGGTGTTCAAACGTGATAGGAAATCTATGTTTGGGAATGGATTGGTGATGGCTGAAGGAGACGAGTGGGTTCGACAAAGACACGTCATCACTCCTGCATTTAATCCTTCCAACTTGAAGGCAATGGCAAGCTTAATGGTGGAGTCCACCACCCAAATGCTGGACAGGTGGGCCCACCTCGTACTCTCCGGCCATCCACAAATCGAAGTTGAAAACGAAATCACTTCCACCGCCGGCGAAATCATCGCCAAAACCAGCTTTGGAATCGATCATATAAGCGGCAGACAAGTCTTCCACAAACTCAGGAATCTCCAGATGACACTCTTTAAAACCAACCGTCTTGTCGGAGTTCCGTTCGCCGGGATTTTGAACGCCGGCAAGGCCCGAGAGGCCAAACGCCTTGGGGAAGAGATCGACGAGCTGTTTCGGGAGGTGATTACGGCGAGGAGAGAGAATCAGGCGGCGGCGGAAGTGGTGCAGCAGAATGATCTTTTGAGCTTGCTTTTGAAAGAGAGTGGCGGAGAGGGGAAGTTGGGGAGGTGGTTGAGTACGACGGAGCTGATTGATGAGTGTAAGACGTTTTTCTTTGGTGGGCATGAAACGACGGCGTTGGCTTTGACGTGGACTTTGCTGCTTTTGGGTATTCATACGGAGTGGCAAACTCAGCTGAGAGATGAGATTAAGGAAGTTCTTGGTGATAAAGAGAGTGACTTTGATTTCACTAAGCTTTCTCAGCTCAAAAAGATGGGATGGGTAATGAGCGAGGTTCTACGTCTATACCCGTCCGCACCCAACGTGCAAAGGCAAGCTAGAAGAGACATTACAGTAAACGGACTGACGATCCCAAACGGCACCAACATGTGGATAGATGTGGTGGCCATGCATCACGACGAGGCCCTTTGGGGCGAGCAGGTGAACGAGTTTCGGCCGGAGAGATTCGAACACGACGGGGTAGCTGGGGGGTGCAGCCACAAGATGGGGTATTTGCCGTTTGGGTTTGGAGGAAGAATGTGCGTTGGAAGGCACTTGACGTTCATGGAGTATAAGATTGTGTTGACGCTTATTTTGTGTAGGTTTTCATTCACATTGTCTCCTGATTACTGCCATTCGCCTTGCATTATGCTGTCGCTCCGGCCTGCGCATGGTCTACCTCTCATTTTTCAACTACTGGAACACTAA 1560 49.04 MLVEEAFGLVIMAFLTSLLFKILFSCWISPFLAHKKLKRNGFRGPTPSFPLGNISEMKRTSFDRVFESLTHDIHSIVFPYFSRWQAAHGWWKVFTYWLGTEPFLYVAEPEFVKMLSREVQAKYWGKPSVFKRDRKSMFGNGLVMAEGDEWVRQRHVITPAFNPSNLKAMASLMVESTTQMLDRWAHLVLSGHPQIEVENEITSTAGEIIAKTSFGIDHISGRQVFHKLRNLQMTLFKTNRLVGVPFAGILNAGKAREAKRLGEEIDELFREVITARRENQAAAEVVQQNDLLSLLLKESGGEGKLGRWLSTTELIDECKTFFFGGHETTALALTWTLLLLGIHTEWQTQLRDEIKEVLGDKESDFDFTKLSQLKKMGWVMSEVLRLYPSAPNVQRQARRDITVNGLTIPNGTNMWIDVVAMHHDEALWGEQVNEFRPERFEHDGVAGGCSHKMGYLPFGFGGRMCVGRHLTFMEYKIVLTLILCRFSFTLSPDYCHSPCIMLSLRPAHGLPLIFQLLEH 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6598707 6601211 + CmoCh02G010870.1 Cmo02g01087 376684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01087 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 11 513 - -
Cmo02g01087 519 SUPERFAMILY Cytochrome P450 37 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01087 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Cmo02g01087 519 Gene3D Cytochrome P450 30 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01087 519 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01087 519 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01087 519 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01087 519 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01087 519 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01087 519 Coils Coil 251 278 - -
Cmo02g01087 519 Pfam Cytochrome P450 92 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01087 519 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 11 513 - -
Cmo02g01087 519 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01087 519 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01087 519 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01087 519 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g01087 Cmo18g01273 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01087 Cmo-Chr2:6598707 Cmo15g00197 Cmo-Chr15:906216 1.44E-97 dispersed
Cmo18g01273 Cmo-Chr18:12375086 Cmo02g01087 Cmo-Chr2:6598707 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01087 - - csv:101220403 804.283