Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo02g01117 | ATGTGGATGCTTCTGGTAACTCTGTCGCTCATCTTCTCGTTTGTTGTGAAGTCATTTTTATTTCCCTCACCGCATGGCCCTTACAACCTCCCGCCGGGGCCGCCGGCGTTACCAATTGTAACAAACTTCCTATTGCTCCGCCGCTCGCCGCTTCACCTTGAGTCCGTGCTGCGCACCTTCTTCGCTAAATACGGCCCAATCATCACCCTCCACATAGGCCCATCCCCGACCGTTTTCATTGCCGACCGCTCCATCGCCCACAAGGCTCTTGTCCAAAACGGCGCCGTCTTTGCCGACCGTCCCCTGTTCCTCTCAATCGACAAGATTGCTGATTCCGCCAGCCTCCACAACATCACATCCGCCCCTTATGGCTCGACCTGGCGCCTTCTCCGCCGCAATCTCGCGGCGGAGATTCTCCACCCTTCGCGGGTCAGGGCTTATTCCCAAGCTCGGAGGTGGGTTTTGGGTAATCTGGTAAGGCGTCTTTTGTGTCGTGGGTGGGAGGAGTGTGTGGTTGTGGAGCATTTTCAGTCGGCTATGTTTAGTTTGTTGGTTTTGATGTGCTTTGGAGACAAATTGAATGAGAAAGAGATAATGGAAATTCAACAAGTGCAGCAAGAGATGTTGGTGAATCTTCAGCGCTTTGTTCTGCTTAATTTCTGGCCTAAGTTGATGAAGATTTTGCTTCGAAGCCGGTGGAAGGCTTATTTACACCTCAAAGCCAAGCAACAAAAGGTTCTAATGCCTTTTATCAAAGCACGAGAGAAGGCTAAACATGAAAGAGCAAAAGAAGAAGAACATGTGGTATCATATGTGGATACATTACTCGATTTGCAGCTGACCCACGAGAATAGAAAGCTTAAAGATGAAGAAATGGTGAACTTATGCTCGGAGTTTCTCAACGCCGGGACCGACACCACCGCGACAACCTTGCAATGGATAATGGCAAACCTAGTCAAATATCCAGAAATCCAACATAAACTCTATGAAGAAATCAAAGGAGTTATGAAGGAATCACAACAACACGGATCAAAGGTGGAAGAAGAAGTGAAGGAAGAAGATTTGGAGAAGCTTCCATATCTGAAAGCTGTTGTTCTAGAAGGATTACGACGACACCCGCCGGGGCATTTCGTGTTACCGCACGCCGTGAAAGAAGACACGATGTTGGAGAATTATTTCATACCTAAAAATGGGACGGTGAATATCTTGGCAGCGGAGATGGGGTGGGATCCTGAAGTGTGGGAGGATCCGATGGCGTTTAAGCCGGAGAGGTTCGTGGGCGGCGGTGGAGAGGCGGAGGCGATGGCGTTCGACATAACGGGGAGCAAGGAGATTAAGATGATGCCATTTGGTGTAGGGAGGAGAATGTGTCCGGCAGCTGGTTTGGCAATGCTTCATTTGGAATATTTTGTGGCAAATTTGGTTTGGCGATTTGAATGGAAAGCTGTGGAAGGAGTCGAGGTTGATCTGTCGGAGAAGATGGAGTTCACCATTGTTATGAACAACCCTCTCAAACCCCACATTCGTCCAAGATTTTAG | 1539 | 48.86 | MWMLLVTLSLIFSFVVKSFLFPSPHGPYNLPPGPPALPIVTNFLLLRRSPLHLESVLRTFFAKYGPIITLHIGPSPTVFIADRSIAHKALVQNGAVFADRPLFLSIDKIADSASLHNITSAPYGSTWRLLRRNLAAEILHPSRVRAYSQARRWVLGNLVRRLLCRGWEECVVVEHFQSAMFSLLVLMCFGDKLNEKEIMEIQQVQQEMLVNLQRFVLLNFWPKLMKILLRSRWKAYLHLKAKQQKVLMPFIKAREKAKHERAKEEEHVVSYVDTLLDLQLTHENRKLKDEEMVNLCSEFLNAGTDTTATTLQWIMANLVKYPEIQHKLYEEIKGVMKESQQHGSKVEEEVKEEDLEKLPYLKAVVLEGLRRHPPGHFVLPHAVKEDTMLENYFIPKNGTVNILAAEMGWDPEVWEDPMAFKPERFVGGGGEAEAMAFDITGSKEIKMMPFGVGRRMCPAAGLAMLHLEYFVANLVWRFEWKAVEGVEVDLSEKMEFTIVMNNPLKPHIRPRF | 512 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 6793022 | 6795386 | - | CmoCh02G011170.1 | Cmo02g01117 | 376714 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo02g01117 | 512 | CDD | RRM_SF | 54 | 105 | - | - | |
Cmo02g01117 | 512 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo02g01117 | 512 | PRINTS | E-class P450 group I signature | 447 | 457 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo02g01117 | 512 | PRINTS | E-class P450 group I signature | 311 | 337 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo02g01117 | 512 | PRINTS | E-class P450 group I signature | 362 | 380 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo02g01117 | 512 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo02g01117 | 512 | PRINTS | E-class P450 group I signature | 403 | 427 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo02g01117 | 512 | PRINTS | E-class P450 group I signature | 457 | 480 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo02g01117 | 512 | PRINTS | E-class P450 group I signature | 291 | 308 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo02g01117 | 512 | PRINTS | E-class P450 group I signature | 179 | 197 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo02g01117 | 512 | PANTHER | CYTOCHROME P450 | 5 | 505 | - | - | |
Cmo02g01117 | 512 | Gene3D | Cytochrome P450 | 26 | 512 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo02g01117 | 512 | PRINTS | P450 superfamily signature | 302 | 319 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo02g01117 | 512 | PRINTS | P450 superfamily signature | 363 | 374 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo02g01117 | 512 | PRINTS | P450 superfamily signature | 448 | 457 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo02g01117 | 512 | PRINTS | P450 superfamily signature | 457 | 468 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo02g01117 | 512 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 450 | 459 | IPR017972 | GO:0005506|GO:0016705 | |
Cmo02g01117 | 512 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 5 | 505 | - | - | |
Cmo02g01117 | 512 | Pfam | Cytochrome P450 | 31 | 502 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo02g01117 | 512 | SUPERFAMILY | Cytochrome P450 | 31 | 511 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g01117 | Cmo-Chr2:6793022 | Cmo15g01108 | Cmo-Chr15:7441035 | 0 | dispersed | |
Cmo17g01339 | Cmo-Chr17:10477015 | Cmo02g01117 | Cmo-Chr2:6793022 | 6.29E-173 | transposed | |
Cmo15g01107 | Cmo-Chr15:7436843 | Cmo02g01117 | Cmo-Chr2:6793022 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo02g01117 | K24184 | - | csv:101218555 | 710.679 |