Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01170 ATGGCTTCCGATCCGAAGGTTCATCTGTTCGAAGAAGTGGCAAAGCATAACAAAACGAAGGATTGTTGGCTTGTAATCTCTGGAAAGGTTTATGATGTAACTCCTTTCATGGAGGATCACCCCGGTGGCGATGAAGTATTGTTGTCTGCAACGGGAAAAGATGCCTCGAACGATTTCGAGGATGTCGGGCACAGTGATTCAGCAAGAGAAATGATGAACAAATACTACATCGGAGAAATTGATCCTTCGACGGTTCCTTCGAAGAAGATTTACATTCCATCACAACAAACCCAGTACAATCAAGATAAGACGCCCGAGTTTGTGATCAAGATCTTGCAGATACTGGTTCCCATATTTATTTTGGGTTTGGCATTTGCCGTTCGACACTACACCAAGAATGAATGA 405 43.21 MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDASNDFEDVGHSDSAREMMNKYYIGEIDPSTVPSKKIYIPSQQTQYNQDKTPEFVIKILQILVPIFILGLAFAVRHYTKNE 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7043499 7045407 + CmoCh02G011700.1 Cmo02g01170 376767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01170 134 SMART Cyt_b5_2 8 81 IPR001199 -
Cmo02g01170 134 PANTHER CYTOCHROME B5-LIKE 1 132 - -
Cmo02g01170 134 Gene3D - 1 87 IPR036400 -
Cmo02g01170 134 PANTHER CYTOCHROME B5 1 132 - -
Cmo02g01170 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Cmo02g01170 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cmo02g01170 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cmo02g01170 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cmo02g01170 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cmo02g01170 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 86 IPR036400 -
Cmo02g01170 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
Cmo02g01170 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g01170 Cmo15g01073 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01170 Cmo-Chr2:7043499 Cmo14g01941 Cmo-Chr14:14367871 4.31E-69 dispersed
Cmo14g02193 Cmo-Chr14:15650456 Cmo02g01170 Cmo-Chr2:7043499 4.92E-46 wgd
Cmo15g01073 Cmo-Chr15:6968038 Cmo02g01170 Cmo-Chr2:7043499 4.07E-94 wgd
Cmo02g01170 Cmo-Chr2:7043499 Cmo06g01016 Cmo-Chr6:7972986 9.48E-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01170 K23490 - csv:101207109 260.381