Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo02g01196 | ATGAGACACTTGCTCTCTTCTCTGATCGGCAGATACAAAATGATGAAGCAATGGGGAGGCACAGATTCAGAATCTGTTGCAACCTTATGGACATTGTGCGCGGCTCTGGCTTTTGCGATAGCTCCAATCGTTGGATCAGTTTCATCATCAAATCACCAGTTTCGTGGAATTTCTCCCCAAGATGTGATGTATTACAAATCGTCCGACGTGATCAAATGTAGAGACGGTTCCAACAAATTTACCAAGGCTCAGCTTAACGATAACTACTGCGATTGCCCTGATGGCACTGACGAACCTGGCACATCCGCATGCCCAAATGGAAAGTTCTATTGTCGAAATGCTGGGCACGTTCCACTTTTGCTATTTTCTTCAAGGGTGAACGACGGTATATGTGATTGTTGTGATGGAAGTGATGAATATGACAACAAAGTCAAATGCCCAAATACATGCTGGGAAGCTGGGAAAGTGGCTAGAGATAAGTTGAAGAAAAAGATTGCCACCCTTGAAGAAGGTTTTAAAATTCGTAAAGTAGAAGTTGAACATGCGAAAGTCGCAATAACTAAGGATGAGGCAGAGCTATTGAAGTTGCAAAACGAGGAAAAAGTATTAAAAGGGCTCGTGGAACAACTTCAAGAGCGCAAAGAACAAATAGAGAAGTTAGAAGAAGAGGAGCGATTATGGAAAGAGAAAGAAGAGAAGAAACATTTGGAGAGAGAAAAAGAGGAGACTAAAAAAATTGAATCGACAGAAACAGCAGATGTTGGGGAAAGCAAAACTGAAGAGAAAGACAATTCGGTAAAAGATGAAGCTACAGAAAATGGTGCCGAGGAATATAAAGGAGAAGGCAATGGAGATGATAGAAGTGGGAACTGGGAGGACTCTGCAACAAATGAGGGTAGAGTGGAAGAAGCAGTTGACTCAGAATTTGAAGCTCAGCTTCCTAATAAACCGGAAACAGGAGCATCAATGCCGAAAGACATAGAAGAGGATACAGCATTAGAGAAAGACAAACCCCTGGCTAAATCTGAAACTGGAGAAAGTGCCGGCTTTAGAGAATCATCTGAAGAAGTCCTGCAAAAGAATGATGCTAATTCAGAGTTATCACGGGAAGAGTTGGGCCGCCTTGTTGCTTCTCGTTGGACCGGAGAAAATACTGAAGAACAGTCAGGGAATGCGGAAAGCACGAATGACAATGATGAAGAAAGTCATGATATCTTAAAAGACACACACGACAATGACGGTTATGCTTCAGACACTGATGGTGAGCACCAAAAATACGACGATGACAACCAAAGATATGATGATGATCTAGAGGATGATTTATATGATATCAGAGATGAAAATCATGATGAGTCTACTTCGTCAGAGAGATATTATTCAGATTCAGAATTGGACTCACCAGATATGGAAACCAAAAGTACCTCCACCTGGCTTGAGAAGATACAAAGAACCGTTCGAAATGTCCTCAAAGCTGTTCATATATTCCAGCCTCCAGTGAACCAATCAGATGCTGCAAACATTCGCAAGGAATATGATGAATCCAATGCCAGGTTATCAAAAATACAGTCAAGGATCTCAAGTTTATCACAGAAGCTGCAGAATGATTTTGGTCCAGAGAAGGAGTTCTATTCATTTTATGACCAATGTTTTGAAAGCAAGAAAAACAAATACACTTACAAAATCTGCCCTTACAAACAAGCTTCACAAGTCGAGGGGCACTCGACAACTCGTTTGGGGCGCTGGAGTAAATTTGAGGACTCATATGGTGTTATGATCTTTTCAAGTGGGGATCATTGCTGGAATGGACCTGATAGAAGCTTGAAGGTCAAGCTAAGATGTGGGCTTAAAAATGACATAACCGACGTAGACGAGCCAAGTCGTTGCGAATACACGGCACTTCTATCAACCCCAGCCGCTTGTGTAGAGGAAAAACTTCAGGAACTGAAAAACAAGCTGGAGATGCTGAATAAAGAAGAGCCAGAGAAGCATGATGAGCTTTGA | 2001 | 41.88 | MRHLLSSLIGRYKMMKQWGGTDSESVATLWTLCAALAFAIAPIVGSVSSSNHQFRGISPQDVMYYKSSDVIKCRDGSNKFTKAQLNDNYCDCPDGTDEPGTSACPNGKFYCRNAGHVPLLLFSSRVNDGICDCCDGSDEYDNKVKCPNTCWEAGKVARDKLKKKIATLEEGFKIRKVEVEHAKVAITKDEAELLKLQNEEKVLKGLVEQLQERKEQIEKLEEEERLWKEKEEKKHLEREKEETKKIESTETADVGESKTEEKDNSVKDEATENGAEEYKGEGNGDDRSGNWEDSATNEGRVEEAVDSEFEAQLPNKPETGASMPKDIEEDTALEKDKPLAKSETGESAGFRESSEEVLQKNDANSELSREELGRLVASRWTGENTEEQSGNAESTNDNDEESHDILKDTHDNDGYASDTDGEHQKYDDDNQRYDDDLEDDLYDIRDENHDESTSSERYYSDSELDSPDMETKSTSTWLEKIQRTVRNVLKAVHIFQPPVNQSDAANIRKEYDESNARLSKIQSRISSLSQKLQNDFGPEKEFYSFYDQCFESKKNKYTYKICPYKQASQVEGHSTTRLGRWSKFEDSYGVMIFSSGDHCWNGPDRSLKVKLRCGLKNDITDVDEPSRCEYTALLSTPAACVEEKLQELKNKLEMLNKEEPEKHDEL | 666 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 7155506 | 7165047 | - | CmoCh02G011960.1 | Cmo02g01196 | 376793 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo02g01196 | 666 | MobiDBLite | consensus disorder prediction | 232 | 309 | - | - | |
Cmo02g01196 | 666 | ProSiteProfiles | MRH domain profile. | 547 | 642 | IPR044865 | - | |
Cmo02g01196 | 666 | MobiDBLite | consensus disorder prediction | 322 | 373 | - | - | |
Cmo02g01196 | 666 | Coils | Coil | 179 | 246 | - | - | |
Cmo02g01196 | 666 | Coils | Coil | 504 | 531 | - | - | |
Cmo02g01196 | 666 | MobiDBLite | consensus disorder prediction | 232 | 473 | - | - | |
Cmo02g01196 | 666 | MobiDBLite | consensus disorder prediction | 396 | 431 | - | - | |
Cmo02g01196 | 666 | Pfam | Glucosidase II beta subunit-like protein | 508 | 659 | IPR036607 | - | |
Cmo02g01196 | 666 | SUPERFAMILY | Mannose 6-phosphate receptor domain | 547 | 640 | IPR009011 | - | |
Cmo02g01196 | 666 | Pfam | Glucosidase II beta subunit-like | 46 | 186 | IPR028146 | - | |
Cmo02g01196 | 666 | Gene3D | - | 542 | 641 | IPR009011 | - | |
Cmo02g01196 | 666 | PANTHER | BNACNNG14010D PROTEIN | 46 | 666 | - | - | |
Cmo02g01196 | 666 | MobiDBLite | consensus disorder prediction | 446 | 468 | - | - | |
Cmo02g01196 | 666 | Coils | Coil | 638 | 665 | - | - | |
Cmo02g01196 | 666 | Gene3D | - | 100 | 151 | IPR036055 | GO:0005515 | |
Cmo02g01196 | 666 | PANTHER | N-LINKED OLIGOSACCHARIDE PROCESSING | 46 | 666 | IPR039794 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g01196 | Cmo-Chr2:7155506 | Cmo19g00925 | Cmo-Chr19:8581516 | 2.03E-12 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo02g01196 | K08288 | - | csv:101221877 | 954.125 |