Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01196 ATGAGACACTTGCTCTCTTCTCTGATCGGCAGATACAAAATGATGAAGCAATGGGGAGGCACAGATTCAGAATCTGTTGCAACCTTATGGACATTGTGCGCGGCTCTGGCTTTTGCGATAGCTCCAATCGTTGGATCAGTTTCATCATCAAATCACCAGTTTCGTGGAATTTCTCCCCAAGATGTGATGTATTACAAATCGTCCGACGTGATCAAATGTAGAGACGGTTCCAACAAATTTACCAAGGCTCAGCTTAACGATAACTACTGCGATTGCCCTGATGGCACTGACGAACCTGGCACATCCGCATGCCCAAATGGAAAGTTCTATTGTCGAAATGCTGGGCACGTTCCACTTTTGCTATTTTCTTCAAGGGTGAACGACGGTATATGTGATTGTTGTGATGGAAGTGATGAATATGACAACAAAGTCAAATGCCCAAATACATGCTGGGAAGCTGGGAAAGTGGCTAGAGATAAGTTGAAGAAAAAGATTGCCACCCTTGAAGAAGGTTTTAAAATTCGTAAAGTAGAAGTTGAACATGCGAAAGTCGCAATAACTAAGGATGAGGCAGAGCTATTGAAGTTGCAAAACGAGGAAAAAGTATTAAAAGGGCTCGTGGAACAACTTCAAGAGCGCAAAGAACAAATAGAGAAGTTAGAAGAAGAGGAGCGATTATGGAAAGAGAAAGAAGAGAAGAAACATTTGGAGAGAGAAAAAGAGGAGACTAAAAAAATTGAATCGACAGAAACAGCAGATGTTGGGGAAAGCAAAACTGAAGAGAAAGACAATTCGGTAAAAGATGAAGCTACAGAAAATGGTGCCGAGGAATATAAAGGAGAAGGCAATGGAGATGATAGAAGTGGGAACTGGGAGGACTCTGCAACAAATGAGGGTAGAGTGGAAGAAGCAGTTGACTCAGAATTTGAAGCTCAGCTTCCTAATAAACCGGAAACAGGAGCATCAATGCCGAAAGACATAGAAGAGGATACAGCATTAGAGAAAGACAAACCCCTGGCTAAATCTGAAACTGGAGAAAGTGCCGGCTTTAGAGAATCATCTGAAGAAGTCCTGCAAAAGAATGATGCTAATTCAGAGTTATCACGGGAAGAGTTGGGCCGCCTTGTTGCTTCTCGTTGGACCGGAGAAAATACTGAAGAACAGTCAGGGAATGCGGAAAGCACGAATGACAATGATGAAGAAAGTCATGATATCTTAAAAGACACACACGACAATGACGGTTATGCTTCAGACACTGATGGTGAGCACCAAAAATACGACGATGACAACCAAAGATATGATGATGATCTAGAGGATGATTTATATGATATCAGAGATGAAAATCATGATGAGTCTACTTCGTCAGAGAGATATTATTCAGATTCAGAATTGGACTCACCAGATATGGAAACCAAAAGTACCTCCACCTGGCTTGAGAAGATACAAAGAACCGTTCGAAATGTCCTCAAAGCTGTTCATATATTCCAGCCTCCAGTGAACCAATCAGATGCTGCAAACATTCGCAAGGAATATGATGAATCCAATGCCAGGTTATCAAAAATACAGTCAAGGATCTCAAGTTTATCACAGAAGCTGCAGAATGATTTTGGTCCAGAGAAGGAGTTCTATTCATTTTATGACCAATGTTTTGAAAGCAAGAAAAACAAATACACTTACAAAATCTGCCCTTACAAACAAGCTTCACAAGTCGAGGGGCACTCGACAACTCGTTTGGGGCGCTGGAGTAAATTTGAGGACTCATATGGTGTTATGATCTTTTCAAGTGGGGATCATTGCTGGAATGGACCTGATAGAAGCTTGAAGGTCAAGCTAAGATGTGGGCTTAAAAATGACATAACCGACGTAGACGAGCCAAGTCGTTGCGAATACACGGCACTTCTATCAACCCCAGCCGCTTGTGTAGAGGAAAAACTTCAGGAACTGAAAAACAAGCTGGAGATGCTGAATAAAGAAGAGCCAGAGAAGCATGATGAGCTTTGA 2001 41.88 MRHLLSSLIGRYKMMKQWGGTDSESVATLWTLCAALAFAIAPIVGSVSSSNHQFRGISPQDVMYYKSSDVIKCRDGSNKFTKAQLNDNYCDCPDGTDEPGTSACPNGKFYCRNAGHVPLLLFSSRVNDGICDCCDGSDEYDNKVKCPNTCWEAGKVARDKLKKKIATLEEGFKIRKVEVEHAKVAITKDEAELLKLQNEEKVLKGLVEQLQERKEQIEKLEEEERLWKEKEEKKHLEREKEETKKIESTETADVGESKTEEKDNSVKDEATENGAEEYKGEGNGDDRSGNWEDSATNEGRVEEAVDSEFEAQLPNKPETGASMPKDIEEDTALEKDKPLAKSETGESAGFRESSEEVLQKNDANSELSREELGRLVASRWTGENTEEQSGNAESTNDNDEESHDILKDTHDNDGYASDTDGEHQKYDDDNQRYDDDLEDDLYDIRDENHDESTSSERYYSDSELDSPDMETKSTSTWLEKIQRTVRNVLKAVHIFQPPVNQSDAANIRKEYDESNARLSKIQSRISSLSQKLQNDFGPEKEFYSFYDQCFESKKNKYTYKICPYKQASQVEGHSTTRLGRWSKFEDSYGVMIFSSGDHCWNGPDRSLKVKLRCGLKNDITDVDEPSRCEYTALLSTPAACVEEKLQELKNKLEMLNKEEPEKHDEL 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7155506 7165047 - CmoCh02G011960.1 Cmo02g01196 376793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01196 666 MobiDBLite consensus disorder prediction 232 309 - -
Cmo02g01196 666 ProSiteProfiles MRH domain profile. 547 642 IPR044865 -
Cmo02g01196 666 MobiDBLite consensus disorder prediction 322 373 - -
Cmo02g01196 666 Coils Coil 179 246 - -
Cmo02g01196 666 Coils Coil 504 531 - -
Cmo02g01196 666 MobiDBLite consensus disorder prediction 232 473 - -
Cmo02g01196 666 MobiDBLite consensus disorder prediction 396 431 - -
Cmo02g01196 666 Pfam Glucosidase II beta subunit-like protein 508 659 IPR036607 -
Cmo02g01196 666 SUPERFAMILY Mannose 6-phosphate receptor domain 547 640 IPR009011 -
Cmo02g01196 666 Pfam Glucosidase II beta subunit-like 46 186 IPR028146 -
Cmo02g01196 666 Gene3D - 542 641 IPR009011 -
Cmo02g01196 666 PANTHER BNACNNG14010D PROTEIN 46 666 - -
Cmo02g01196 666 MobiDBLite consensus disorder prediction 446 468 - -
Cmo02g01196 666 Coils Coil 638 665 - -
Cmo02g01196 666 Gene3D - 100 151 IPR036055 GO:0005515
Cmo02g01196 666 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 46 666 IPR039794 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01196 Cmo-Chr2:7155506 Cmo19g00925 Cmo-Chr19:8581516 2.03E-12 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01196 K08288 - csv:101221877 954.125