Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo02g01248 | ATGGCTTCTTTCAAAGCTATGATTCCTTTGGCTCTTTGTGTGTGTTTCTTGGTTGGGTCCGTTACTTCTCAGCTCACCTCCACCTTCTACGACACTACTTGCCCCAATGTGTCCAGCATTGTGCAAGGCGTCGTGCAACAAGCTCTCCAAAGCGACGATCGTGCTGGTGCTAAACTCATCCGTCTTCACTTCCACGACTGCTTTGTCGATGGATGTGATGGGTCTGTTCTACTAGAGGATCAAACAGGCATAGTGAGTGAGCTTGGTGCTCCTGGAAACGGAGGCATCACTGGTTTCAATATTGTCGACGACATTAAAACCGCAGTTGAGAATGTTTGTCCTGGTGTTGTCTCCTGTGCTGATATTCTAGCGCTTGGTTCTCGATTTGCCGTCACTTTGGCGAGCGGGCAGGGGTGGACGGTTCCATTGGGGAGAAGAGATAGTAGAACGGCGAATTTGGATGGAGCTAGAAATAGGCTTCCAAGTCCGTTTGAGGATCTCACAGAACTTCAAGGGAAGTTCAGGGACGTGGGGCTAGACGACACAACTGACCTCGTAGCCTTGTCAGGCGCGCACACGTTCGGGCGCTCAAGGTGCAGATTCTTCGACGGACGGCTGAACACATCCAACCCAGACCCAACCCTGGACTCGACATACGCGGACCAGCTACGACAGAGCTGTCAGCCGGGGCGTGACACATTCGTGAACCTGGACCCGACAACGCCCGACACGTTCGACAACAACTACTTCACGAATCTTCAGAACAACCGTGGGCTTCTAGGAAGTGACCAAGTGTTGTTGTCCACGAGTGGGGCCCCAACTGTGAGCATTGTGAACAACTTCGCCAACAGCCCGAGCCAATTCGCGAGCGCCTTCGCTCAGTCCATGATTAACATGGGAAATCTGAGCCCGTTGACGGGGAGCAGCGGGGAAATTAGGTCCAATTGCAGAAGGCTGAACTGA | 963 | 52.75 | MASFKAMIPLALCVCFLVGSVTSQLTSTFYDTTCPNVSSIVQGVVQQALQSDDRAGAKLIRLHFHDCFVDGCDGSVLLEDQTGIVSELGAPGNGGITGFNIVDDIKTAVENVCPGVVSCADILALGSRFAVTLASGQGWTVPLGRRDSRTANLDGARNRLPSPFEDLTELQGKFRDVGLDDTTDLVALSGAHTFGRSRCRFFDGRLNTSNPDPTLDSTYADQLRQSCQPGRDTFVNLDPTTPDTFDNNYFTNLQNNRGLLGSDQVLLSTSGAPTVSIVNNFANSPSQFASAFAQSMINMGNLSPLTGSSGEIRSNCRRLN | 320 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 7489384 | 7490981 | - | CmoCh02G012480.1 | Cmo02g01248 | 376845 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo02g01248 | 320 | CDD | secretory_peroxidase | 24 | 318 | IPR033905 | GO:0004601|GO:0042744 | |
Cmo02g01248 | 320 | ProSiteProfiles | Plant heme peroxidase family profile. | 24 | 320 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01248 | 320 | Pfam | Peroxidase | 42 | 284 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01248 | 320 | Gene3D | - | 29 | 320 | - | - | |
Cmo02g01248 | 320 | ProSitePatterns | Peroxidases active site signature. | 56 | 67 | IPR019794 | GO:0004601 | |
Cmo02g01248 | 320 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 184 | 194 | IPR019793 | - | |
Cmo02g01248 | 320 | PANTHER | PEROXIDASE 58 | 16 | 320 | - | - | |
Cmo02g01248 | 320 | SUPERFAMILY | Heme-dependent peroxidases | 24 | 320 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01248 | 320 | PANTHER | PEROXIDASE 72-RELATED | 16 | 320 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01248 | 320 | Gene3D | Peroxidase, domain 2 | 161 | 299 | - | - | |
Cmo02g01248 | 320 | PRINTS | Haem peroxidase superfamily signature | 56 | 70 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01248 | 320 | PRINTS | Haem peroxidase superfamily signature | 117 | 134 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01248 | 320 | PRINTS | Haem peroxidase superfamily signature | 135 | 147 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01248 | 320 | PRINTS | Haem peroxidase superfamily signature | 184 | 199 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01248 | 320 | PRINTS | Haem peroxidase superfamily signature | 238 | 253 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01248 | 320 | PRINTS | Plant peroxidase signature | 34 | 53 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01248 | 320 | PRINTS | Plant peroxidase signature | 58 | 78 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01248 | 320 | PRINTS | Plant peroxidase signature | 97 | 110 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01248 | 320 | PRINTS | Plant peroxidase signature | 116 | 126 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01248 | 320 | PRINTS | Plant peroxidase signature | 135 | 150 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01248 | 320 | PRINTS | Plant peroxidase signature | 183 | 195 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01248 | 320 | PRINTS | Plant peroxidase signature | 236 | 251 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01248 | 320 | PRINTS | Plant peroxidase signature | 252 | 269 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01248 | 320 | PRINTS | Plant peroxidase signature | 294 | 307 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g01248 | Cmo-Chr2:7489384 | Cmo20g00050 | Cmo-Chr20:294690 | 3.62E-162 | dispersed | |
Cmo02g01248 | Cmo-Chr2:7489384 | Cmo02g01249 | Cmo-Chr2:7491337 | 1.53E-66 | tandem | |
Cmo15g01428 | Cmo-Chr15:9709194 | Cmo02g01248 | Cmo-Chr2:7489384 | 6.38E-47 | transposed | |
Cmo02g01248 | Cmo-Chr2:7489384 | Cmo20g00049 | Cmo-Chr20:291502 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo02g01248 | K00430 | - | csv:101212957 | 488.419 |