Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01248 ATGGCTTCTTTCAAAGCTATGATTCCTTTGGCTCTTTGTGTGTGTTTCTTGGTTGGGTCCGTTACTTCTCAGCTCACCTCCACCTTCTACGACACTACTTGCCCCAATGTGTCCAGCATTGTGCAAGGCGTCGTGCAACAAGCTCTCCAAAGCGACGATCGTGCTGGTGCTAAACTCATCCGTCTTCACTTCCACGACTGCTTTGTCGATGGATGTGATGGGTCTGTTCTACTAGAGGATCAAACAGGCATAGTGAGTGAGCTTGGTGCTCCTGGAAACGGAGGCATCACTGGTTTCAATATTGTCGACGACATTAAAACCGCAGTTGAGAATGTTTGTCCTGGTGTTGTCTCCTGTGCTGATATTCTAGCGCTTGGTTCTCGATTTGCCGTCACTTTGGCGAGCGGGCAGGGGTGGACGGTTCCATTGGGGAGAAGAGATAGTAGAACGGCGAATTTGGATGGAGCTAGAAATAGGCTTCCAAGTCCGTTTGAGGATCTCACAGAACTTCAAGGGAAGTTCAGGGACGTGGGGCTAGACGACACAACTGACCTCGTAGCCTTGTCAGGCGCGCACACGTTCGGGCGCTCAAGGTGCAGATTCTTCGACGGACGGCTGAACACATCCAACCCAGACCCAACCCTGGACTCGACATACGCGGACCAGCTACGACAGAGCTGTCAGCCGGGGCGTGACACATTCGTGAACCTGGACCCGACAACGCCCGACACGTTCGACAACAACTACTTCACGAATCTTCAGAACAACCGTGGGCTTCTAGGAAGTGACCAAGTGTTGTTGTCCACGAGTGGGGCCCCAACTGTGAGCATTGTGAACAACTTCGCCAACAGCCCGAGCCAATTCGCGAGCGCCTTCGCTCAGTCCATGATTAACATGGGAAATCTGAGCCCGTTGACGGGGAGCAGCGGGGAAATTAGGTCCAATTGCAGAAGGCTGAACTGA 963 52.75 MASFKAMIPLALCVCFLVGSVTSQLTSTFYDTTCPNVSSIVQGVVQQALQSDDRAGAKLIRLHFHDCFVDGCDGSVLLEDQTGIVSELGAPGNGGITGFNIVDDIKTAVENVCPGVVSCADILALGSRFAVTLASGQGWTVPLGRRDSRTANLDGARNRLPSPFEDLTELQGKFRDVGLDDTTDLVALSGAHTFGRSRCRFFDGRLNTSNPDPTLDSTYADQLRQSCQPGRDTFVNLDPTTPDTFDNNYFTNLQNNRGLLGSDQVLLSTSGAPTVSIVNNFANSPSQFASAFAQSMINMGNLSPLTGSSGEIRSNCRRLN 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7489384 7490981 - CmoCh02G012480.1 Cmo02g01248 376845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01248 320 CDD secretory_peroxidase 24 318 IPR033905 GO:0004601|GO:0042744
Cmo02g01248 320 ProSiteProfiles Plant heme peroxidase family profile. 24 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01248 320 Pfam Peroxidase 42 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01248 320 Gene3D - 29 320 - -
Cmo02g01248 320 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Cmo02g01248 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Cmo02g01248 320 PANTHER PEROXIDASE 58 16 320 - -
Cmo02g01248 320 SUPERFAMILY Heme-dependent peroxidases 24 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo02g01248 320 PANTHER PEROXIDASE 72-RELATED 16 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01248 320 Gene3D Peroxidase, domain 2 161 299 - -
Cmo02g01248 320 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01248 320 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01248 320 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01248 320 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01248 320 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01248 320 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01248 320 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01248 320 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01248 320 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01248 320 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01248 320 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01248 320 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01248 320 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01248 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01248 Cmo-Chr2:7489384 Cmo20g00050 Cmo-Chr20:294690 3.62E-162 dispersed
Cmo02g01248 Cmo-Chr2:7489384 Cmo02g01249 Cmo-Chr2:7491337 1.53E-66 tandem
Cmo15g01428 Cmo-Chr15:9709194 Cmo02g01248 Cmo-Chr2:7489384 6.38E-47 transposed
Cmo02g01248 Cmo-Chr2:7489384 Cmo20g00049 Cmo-Chr20:291502 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01248 K00430 - csv:101212957 488.419