Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01250 ATGGCTTCCCCCAAGCATACAGCCTTCGCCGCGGTGGTAGCTTTTATGCTAGCCACCACTCACGCGCAGCTCAACCCTTTCTACTACGCTTTGACATGCCCTCTCCTCCCCGGGATCGTCCTCGACGTGGTCTCCCGAGCTTTAAAGACCGACGACCGAGCTGCTGCTAAGCTCATCCGCCTCCATTTCCATGATTGCTTTGTCAATGGGTGCGACGGCTCTGTTTTGCTGGAGGATGCACCAGGCATCGACAGTGAACTAAACGCACCTCCCAACGATGGGATTCAAGGGGGTGACATCGTGGACAACATCAAAGCAGAAACAGAACGCTTCTGTCCGGGCGTTGTCTCCTGCGCTGACATCCTAGCCATTTCGTCTCAAATCTCTGTTTTCTTGTCAGGAGGGCCAATTTGGGTAGTGCCATTGGGTAGAAAAGACAGCAGGATAGCCAATAGAACAGGAACCTCAAATCTCCCCGGTCCATCAGAAACTCTCAAAGGACTCAAAGACAAATTTGGGGCTCTTGGGTTTGATTCAACCGATCTCGTGGCTCTATCAGGAGCCCACACGTTCGGGAAATCCAGATGTATGTTCTTCAGTGGACGCTTCGACAACTTCAACAACACCGGCAGACCCGACCCAACGCTCGACCCTGCTTACAGGGAGCAGCTCCGACAACTCTGTACAACCCAACAAACAAGAGCGAATTTCGATCCAACCACACCGACCAAATTCGACAAAGCTTATTACAGCAATCTCCTGAACCTGAAAGGCCTTCTCCAAAGTGACCAAGAGCTCTTCTCCACACCCAGGGCTGACACGACTGCCATCGTCAAGAACTTCGCCGCCAACGAGCGTGCGTTCTTTAAACAATTTGTGAAATCCATGATCAAAATGGGTAATCTCAAGCCGCCTTCCGGCATCAGATCAGAAGTCAGATTAAACTGTAGAAGGGTCAACGCAGCCAGTGGGCATGATGTTATGTAA 987 51.37 MASPKHTAFAAVVAFMLATTHAQLNPFYYALTCPLLPGIVLDVVSRALKTDDRAAAKLIRLHFHDCFVNGCDGSVLLEDAPGIDSELNAPPNDGIQGGDIVDNIKAETERFCPGVVSCADILAISSQISVFLSGGPIWVVPLGRKDSRIANRTGTSNLPGPSETLKGLKDKFGALGFDSTDLVALSGAHTFGKSRCMFFSGRFDNFNNTGRPDPTLDPAYREQLRQLCTTQQTRANFDPTTPTKFDKAYYSNLLNLKGLLQSDQELFSTPRADTTAIVKNFAANERAFFKQFVKSMIKMGNLKPPSGIRSEVRLNCRRVNAASGHDVM 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7498257 7499541 - CmoCh02G012500.1 Cmo02g01250 376847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01250 328 SUPERFAMILY Heme-dependent peroxidases 23 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo02g01250 328 Pfam Peroxidase 42 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01250 328 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01250 328 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01250 328 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01250 328 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01250 328 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01250 328 CDD secretory_peroxidase 23 319 IPR033905 GO:0004601|GO:0042744
Cmo02g01250 328 Gene3D - 28 320 - -
Cmo02g01250 328 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Cmo02g01250 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Cmo02g01250 328 PANTHER PEROXIDASE 58 15 320 - -
Cmo02g01250 328 Gene3D Peroxidase, domain 2 159 299 - -
Cmo02g01250 328 ProSiteProfiles Plant heme peroxidase family profile. 23 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01250 328 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01250 328 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01250 328 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01250 328 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01250 328 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01250 328 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01250 328 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01250 328 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01250 328 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01250 328 PANTHER PEROXIDASE 72-RELATED 15 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01250 Cmo-Chr2:7498257 Cmo20g00055 Cmo-Chr20:306631 0 dispersed
Cmo02g01249 Cmo-Chr2:7491337 Cmo02g01250 Cmo-Chr2:7498257 1.71E-41 tandem
Cmo02g01250 Cmo-Chr2:7498257 Cmo02g01251 Cmo-Chr2:7499807 4.33E-167 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01250 K00430 - csv:101211989 521.546