Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo02g01250 | ATGGCTTCCCCCAAGCATACAGCCTTCGCCGCGGTGGTAGCTTTTATGCTAGCCACCACTCACGCGCAGCTCAACCCTTTCTACTACGCTTTGACATGCCCTCTCCTCCCCGGGATCGTCCTCGACGTGGTCTCCCGAGCTTTAAAGACCGACGACCGAGCTGCTGCTAAGCTCATCCGCCTCCATTTCCATGATTGCTTTGTCAATGGGTGCGACGGCTCTGTTTTGCTGGAGGATGCACCAGGCATCGACAGTGAACTAAACGCACCTCCCAACGATGGGATTCAAGGGGGTGACATCGTGGACAACATCAAAGCAGAAACAGAACGCTTCTGTCCGGGCGTTGTCTCCTGCGCTGACATCCTAGCCATTTCGTCTCAAATCTCTGTTTTCTTGTCAGGAGGGCCAATTTGGGTAGTGCCATTGGGTAGAAAAGACAGCAGGATAGCCAATAGAACAGGAACCTCAAATCTCCCCGGTCCATCAGAAACTCTCAAAGGACTCAAAGACAAATTTGGGGCTCTTGGGTTTGATTCAACCGATCTCGTGGCTCTATCAGGAGCCCACACGTTCGGGAAATCCAGATGTATGTTCTTCAGTGGACGCTTCGACAACTTCAACAACACCGGCAGACCCGACCCAACGCTCGACCCTGCTTACAGGGAGCAGCTCCGACAACTCTGTACAACCCAACAAACAAGAGCGAATTTCGATCCAACCACACCGACCAAATTCGACAAAGCTTATTACAGCAATCTCCTGAACCTGAAAGGCCTTCTCCAAAGTGACCAAGAGCTCTTCTCCACACCCAGGGCTGACACGACTGCCATCGTCAAGAACTTCGCCGCCAACGAGCGTGCGTTCTTTAAACAATTTGTGAAATCCATGATCAAAATGGGTAATCTCAAGCCGCCTTCCGGCATCAGATCAGAAGTCAGATTAAACTGTAGAAGGGTCAACGCAGCCAGTGGGCATGATGTTATGTAA | 987 | 51.37 | MASPKHTAFAAVVAFMLATTHAQLNPFYYALTCPLLPGIVLDVVSRALKTDDRAAAKLIRLHFHDCFVNGCDGSVLLEDAPGIDSELNAPPNDGIQGGDIVDNIKAETERFCPGVVSCADILAISSQISVFLSGGPIWVVPLGRKDSRIANRTGTSNLPGPSETLKGLKDKFGALGFDSTDLVALSGAHTFGKSRCMFFSGRFDNFNNTGRPDPTLDPAYREQLRQLCTTQQTRANFDPTTPTKFDKAYYSNLLNLKGLLQSDQELFSTPRADTTAIVKNFAANERAFFKQFVKSMIKMGNLKPPSGIRSEVRLNCRRVNAASGHDVM | 328 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 7498257 | 7499541 | - | CmoCh02G012500.1 | Cmo02g01250 | 376847 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo02g01250 | 328 | SUPERFAMILY | Heme-dependent peroxidases | 23 | 320 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01250 | 328 | Pfam | Peroxidase | 42 | 284 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01250 | 328 | PRINTS | Haem peroxidase superfamily signature | 55 | 69 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01250 | 328 | PRINTS | Haem peroxidase superfamily signature | 116 | 133 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01250 | 328 | PRINTS | Haem peroxidase superfamily signature | 134 | 146 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01250 | 328 | PRINTS | Haem peroxidase superfamily signature | 181 | 196 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01250 | 328 | PRINTS | Haem peroxidase superfamily signature | 238 | 253 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01250 | 328 | CDD | secretory_peroxidase | 23 | 319 | IPR033905 | GO:0004601|GO:0042744 | |
Cmo02g01250 | 328 | Gene3D | - | 28 | 320 | - | - | |
Cmo02g01250 | 328 | ProSitePatterns | Peroxidases active site signature. | 55 | 66 | IPR019794 | GO:0004601 | |
Cmo02g01250 | 328 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 181 | 191 | IPR019793 | - | |
Cmo02g01250 | 328 | PANTHER | PEROXIDASE 58 | 15 | 320 | - | - | |
Cmo02g01250 | 328 | Gene3D | Peroxidase, domain 2 | 159 | 299 | - | - | |
Cmo02g01250 | 328 | ProSiteProfiles | Plant heme peroxidase family profile. | 23 | 320 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01250 | 328 | PRINTS | Plant peroxidase signature | 33 | 52 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01250 | 328 | PRINTS | Plant peroxidase signature | 57 | 77 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01250 | 328 | PRINTS | Plant peroxidase signature | 96 | 109 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01250 | 328 | PRINTS | Plant peroxidase signature | 115 | 125 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01250 | 328 | PRINTS | Plant peroxidase signature | 134 | 149 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01250 | 328 | PRINTS | Plant peroxidase signature | 180 | 192 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01250 | 328 | PRINTS | Plant peroxidase signature | 236 | 251 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01250 | 328 | PRINTS | Plant peroxidase signature | 252 | 269 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01250 | 328 | PRINTS | Plant peroxidase signature | 294 | 307 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01250 | 328 | PANTHER | PEROXIDASE 72-RELATED | 15 | 320 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g01250 | Cmo-Chr2:7498257 | Cmo20g00055 | Cmo-Chr20:306631 | 0 | dispersed | |
Cmo02g01249 | Cmo-Chr2:7491337 | Cmo02g01250 | Cmo-Chr2:7498257 | 1.71E-41 | tandem | |
Cmo02g01250 | Cmo-Chr2:7498257 | Cmo02g01251 | Cmo-Chr2:7499807 | 4.33E-167 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo02g01250 | K00430 | - | csv:101211989 | 521.546 |