Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo02g01251 | ATGAAAATAATAACCTTGAATTCATCGCAAACTTGTCGTCCAAGCGCATGGCTGTGTATAAAAAAGGAACCTCCTTTCCACTATCTTCACAAAACCAAAGCAATGGCTTCCCCTAAACTTGTAGCCTTTGTTGCGGCGGTGGGTTTGATGCTGGCCGGGGCCTCTCACGCTCAGCTTAGCCCCTTCTTCTACACCTTCACATGCCCTCAGCTGCCTTTTATTGTTCTCAACGAGGTCTCGACAGCTGTTGAAACCGATGATCGAGCAGCTGCCAAGCTCATTCGCCTCCACTTTCACGACTGCTTTGCCAATGGGTGTGATGGGTCTGTGCTACTGGAGGACGTGCCGGGCGTCATCGACAGTGAATTAAACGCAGGTGCCAACAATGGGATCCAAGGGCGGGAAATTGTGGATAAAATCAAAGCAGCCGTTGAAAGCTCTTGCCCTGGCGTTGTGTCCTGCGCTGACATCTTAGCGCTGGCTTCTCAAGTTTCTGTTGTATTGTCTGGCGGGCCAGCCTGGGTGGTTCTACTGGGAAGAAGAGACAGCAGAGTAGCGAACAGAGCCGCAGCAGAGGATCTTCCGAGTCCGTTCGAAACTCTGGATATACTGAAATCGAAATTCAAGGCGTTTGGGCTTGATTCTAGAGACCTTGTGACGCTGTCAGGAGCGCACACGTTCGGTCGATCCAGGTGCTTTTTCTTCTCTGGAAGGTTCGACAACTTCAACAACACCGGCCTCCCAGACCCGACTCTGGATGCTGCTTACAGGGAGCAGCTTCGTCAAGCATGCACCACACCAACAACACGAGTGAATTTCGATCCCGTGACACCAGACATATTCGACAAAAACTACTACACCAATCTTCAAAGCCTGAAAGGACTTCTCCAAAGTGATCAAGAGCTTTTCTCCACTCCTGGGGCTGATACCACTGCCATTGTCAACGAGTTCGCCGCCAGCCAGTTTCGATTCTTTATTCAATTTGGGAATTCCATGATCAAATTGGGGAACCTCATGCCTCCACCTGGGACACCATCGGAGGTGCGATCGCAGTGTAGGCTGCTCAACCCATCCAGTCCTGCCCATGATGTTATGTAA | 1098 | 50.73 | MKIITLNSSQTCRPSAWLCIKKEPPFHYLHKTKAMASPKLVAFVAAVGLMLAGASHAQLSPFFYTFTCPQLPFIVLNEVSTAVETDDRAAAKLIRLHFHDCFANGCDGSVLLEDVPGVIDSELNAGANNGIQGREIVDKIKAAVESSCPGVVSCADILALASQVSVVLSGGPAWVVLLGRRDSRVANRAAAEDLPSPFETLDILKSKFKAFGLDSRDLVTLSGAHTFGRSRCFFFSGRFDNFNNTGLPDPTLDAAYREQLRQACTTPTTRVNFDPVTPDIFDKNYYTNLQSLKGLLQSDQELFSTPGADTTAIVNEFAASQFRFFIQFGNSMIKLGNLMPPPGTPSEVRSQCRLLNPSSPAHDVM | 365 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 7499807 | 7501309 | - | CmoCh02G012510.1 | Cmo02g01251 | 376848 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo02g01251 | 365 | PRINTS | Haem peroxidase superfamily signature | 217 | 232 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01251 | 365 | PRINTS | Haem peroxidase superfamily signature | 90 | 104 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01251 | 365 | PRINTS | Haem peroxidase superfamily signature | 274 | 289 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01251 | 365 | PRINTS | Haem peroxidase superfamily signature | 152 | 169 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01251 | 365 | PRINTS | Haem peroxidase superfamily signature | 170 | 182 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01251 | 365 | PANTHER | PEROXIDASE 72-RELATED | 50 | 356 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01251 | 365 | PANTHER | PEROXIDASE 58 | 50 | 356 | - | - | |
Cmo02g01251 | 365 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 217 | 227 | IPR019793 | - | |
Cmo02g01251 | 365 | PRINTS | Plant peroxidase signature | 170 | 185 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01251 | 365 | PRINTS | Plant peroxidase signature | 92 | 112 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01251 | 365 | PRINTS | Plant peroxidase signature | 288 | 305 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01251 | 365 | PRINTS | Plant peroxidase signature | 151 | 161 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01251 | 365 | PRINTS | Plant peroxidase signature | 272 | 287 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01251 | 365 | PRINTS | Plant peroxidase signature | 216 | 228 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01251 | 365 | PRINTS | Plant peroxidase signature | 132 | 145 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01251 | 365 | PRINTS | Plant peroxidase signature | 68 | 87 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01251 | 365 | PRINTS | Plant peroxidase signature | 330 | 343 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01251 | 365 | ProSitePatterns | Peroxidases active site signature. | 90 | 101 | IPR019794 | GO:0004601 | |
Cmo02g01251 | 365 | SUPERFAMILY | Heme-dependent peroxidases | 58 | 357 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01251 | 365 | ProSiteProfiles | Plant heme peroxidase family profile. | 58 | 356 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01251 | 365 | Gene3D | - | 63 | 356 | - | - | |
Cmo02g01251 | 365 | Gene3D | Peroxidase, domain 2 | 195 | 335 | - | - | |
Cmo02g01251 | 365 | Pfam | Peroxidase | 77 | 320 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo02g01251 | 365 | CDD | secretory_peroxidase | 58 | 353 | IPR033905 | GO:0004601|GO:0042744 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo02g01251 | Cmo20g00050 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g01251 | Cmo-Chr2:7499807 | Cmo20g00055 | Cmo-Chr20:306631 | 3.82E-173 | dispersed | |
Cmo02g01250 | Cmo-Chr2:7498257 | Cmo02g01251 | Cmo-Chr2:7499807 | 4.33E-167 | tandem | |
Cmo02g01251 | Cmo-Chr2:7499807 | Cmo02g01252 | Cmo-Chr2:7503176 | 1.18E-145 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo02g01251 | K00430 | - | csv:101211752 | 547.74 |