Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01251 ATGAAAATAATAACCTTGAATTCATCGCAAACTTGTCGTCCAAGCGCATGGCTGTGTATAAAAAAGGAACCTCCTTTCCACTATCTTCACAAAACCAAAGCAATGGCTTCCCCTAAACTTGTAGCCTTTGTTGCGGCGGTGGGTTTGATGCTGGCCGGGGCCTCTCACGCTCAGCTTAGCCCCTTCTTCTACACCTTCACATGCCCTCAGCTGCCTTTTATTGTTCTCAACGAGGTCTCGACAGCTGTTGAAACCGATGATCGAGCAGCTGCCAAGCTCATTCGCCTCCACTTTCACGACTGCTTTGCCAATGGGTGTGATGGGTCTGTGCTACTGGAGGACGTGCCGGGCGTCATCGACAGTGAATTAAACGCAGGTGCCAACAATGGGATCCAAGGGCGGGAAATTGTGGATAAAATCAAAGCAGCCGTTGAAAGCTCTTGCCCTGGCGTTGTGTCCTGCGCTGACATCTTAGCGCTGGCTTCTCAAGTTTCTGTTGTATTGTCTGGCGGGCCAGCCTGGGTGGTTCTACTGGGAAGAAGAGACAGCAGAGTAGCGAACAGAGCCGCAGCAGAGGATCTTCCGAGTCCGTTCGAAACTCTGGATATACTGAAATCGAAATTCAAGGCGTTTGGGCTTGATTCTAGAGACCTTGTGACGCTGTCAGGAGCGCACACGTTCGGTCGATCCAGGTGCTTTTTCTTCTCTGGAAGGTTCGACAACTTCAACAACACCGGCCTCCCAGACCCGACTCTGGATGCTGCTTACAGGGAGCAGCTTCGTCAAGCATGCACCACACCAACAACACGAGTGAATTTCGATCCCGTGACACCAGACATATTCGACAAAAACTACTACACCAATCTTCAAAGCCTGAAAGGACTTCTCCAAAGTGATCAAGAGCTTTTCTCCACTCCTGGGGCTGATACCACTGCCATTGTCAACGAGTTCGCCGCCAGCCAGTTTCGATTCTTTATTCAATTTGGGAATTCCATGATCAAATTGGGGAACCTCATGCCTCCACCTGGGACACCATCGGAGGTGCGATCGCAGTGTAGGCTGCTCAACCCATCCAGTCCTGCCCATGATGTTATGTAA 1098 50.73 MKIITLNSSQTCRPSAWLCIKKEPPFHYLHKTKAMASPKLVAFVAAVGLMLAGASHAQLSPFFYTFTCPQLPFIVLNEVSTAVETDDRAAAKLIRLHFHDCFANGCDGSVLLEDVPGVIDSELNAGANNGIQGREIVDKIKAAVESSCPGVVSCADILALASQVSVVLSGGPAWVVLLGRRDSRVANRAAAEDLPSPFETLDILKSKFKAFGLDSRDLVTLSGAHTFGRSRCFFFSGRFDNFNNTGLPDPTLDAAYREQLRQACTTPTTRVNFDPVTPDIFDKNYYTNLQSLKGLLQSDQELFSTPGADTTAIVNEFAASQFRFFIQFGNSMIKLGNLMPPPGTPSEVRSQCRLLNPSSPAHDVM 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7499807 7501309 - CmoCh02G012510.1 Cmo02g01251 376848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01251 365 PRINTS Haem peroxidase superfamily signature 217 232 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01251 365 PRINTS Haem peroxidase superfamily signature 90 104 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01251 365 PRINTS Haem peroxidase superfamily signature 274 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01251 365 PRINTS Haem peroxidase superfamily signature 152 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01251 365 PRINTS Haem peroxidase superfamily signature 170 182 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01251 365 PANTHER PEROXIDASE 72-RELATED 50 356 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01251 365 PANTHER PEROXIDASE 58 50 356 - -
Cmo02g01251 365 ProSitePatterns Peroxidases proximal heme-ligand signature. 217 227 IPR019793 -
Cmo02g01251 365 PRINTS Plant peroxidase signature 170 185 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01251 365 PRINTS Plant peroxidase signature 92 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01251 365 PRINTS Plant peroxidase signature 288 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01251 365 PRINTS Plant peroxidase signature 151 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01251 365 PRINTS Plant peroxidase signature 272 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01251 365 PRINTS Plant peroxidase signature 216 228 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01251 365 PRINTS Plant peroxidase signature 132 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01251 365 PRINTS Plant peroxidase signature 68 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01251 365 PRINTS Plant peroxidase signature 330 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01251 365 ProSitePatterns Peroxidases active site signature. 90 101 IPR019794 GO:0004601
Cmo02g01251 365 SUPERFAMILY Heme-dependent peroxidases 58 357 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo02g01251 365 ProSiteProfiles Plant heme peroxidase family profile. 58 356 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01251 365 Gene3D - 63 356 - -
Cmo02g01251 365 Gene3D Peroxidase, domain 2 195 335 - -
Cmo02g01251 365 Pfam Peroxidase 77 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01251 365 CDD secretory_peroxidase 58 353 IPR033905 GO:0004601|GO:0042744
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g01251 Cmo20g00050 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01251 Cmo-Chr2:7499807 Cmo20g00055 Cmo-Chr20:306631 3.82E-173 dispersed
Cmo02g01250 Cmo-Chr2:7498257 Cmo02g01251 Cmo-Chr2:7499807 4.33E-167 tandem
Cmo02g01251 Cmo-Chr2:7499807 Cmo02g01252 Cmo-Chr2:7503176 1.18E-145 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01251 K00430 - csv:101211752 547.74