Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01252 ATGGCTTCTAACTCCACACTCTTAGCCTTCCTCTGCTTGGTGGGTTTGATGGTGGGAGCCTCTCTGGCTCAGCTAAATCCTTCCTTCTACGCCAAATCATGTCCTAATTTAGCAAAAATTGTGAATGGCGTAGTCGCAAACGCGCTACGAACCGATGCTCGAGCCGGAGCTAAACTCATTCGCTTCCACTTCCACGACTGCTTTGTTAATGGGTGTGATGCGTCTGTTTTGCTTGAGAATGCACCTGGCATCGACAGTGAACTAGACGCCCCTGGAAATCAAGGCATTCAAGGTCTTAACATCATCGACGACATCAAATCTGCTGTCGAAAAGGCTTGCCCACGTACTGTTTCCTGTGCTGACATCTTGACCATTGCCTCTAGAGAATCTGTCGTTCTGAGTAATTTATGTGTGTTGAAGGCTGGTGGGCCGAGCTGGATTGTGCCATTGGGACGAAGAGACAGCCGAACAGCCAATAAGGAGGGAGCCACCAACAACCTCGCCAGCCCCTTTGAAGACCTGGATGGACTCAAAGCCAAGTTCTCTGTTTTCGGCCTCGACTCCACTGATCTTGTTGCTCTGTCCGGAGCACATACATTTGGGCGTTCAAGATGCGCGTTTTTCAGCCATCGTTTCGCGAATTTCAACGGCACCAACAGGCCAGATCCGACACTAGACCCAGCTTACAGAGAGCAACTCCGGAGGGTTTGTTCTAGCTCAGAGACACGAGCCAATTTTGACCCGACAACGCCAGACAAATTTGACAAGAACTATTACACCAATCTTCAGGGGCTTCGAGGGCTTCTTCAGAGCGATCAAGAACTGTTCTCTACTCGCGGGGCTGACACGGTGGCGATTGTGAACCGTTTCGCGAAAAACCAAGATGAGTTCTTTAAAAATTTTGGTCGGTCTATGATCAAAATGGGAAACATTAGCCCTTTAACTGGAAAGAAAGGAGAAATTAGATTGAACTGTCGGAGGGTTAATTCTCCACCAAGGGCCGATGAGGGGCATGATGTTATATAG 1026 48.83 MASNSTLLAFLCLVGLMVGASLAQLNPSFYAKSCPNLAKIVNGVVANALRTDARAGAKLIRFHFHDCFVNGCDASVLLENAPGIDSELDAPGNQGIQGLNIIDDIKSAVEKACPRTVSCADILTIASRESVVLSNLCVLKAGGPSWIVPLGRRDSRTANKEGATNNLASPFEDLDGLKAKFSVFGLDSTDLVALSGAHTFGRSRCAFFSHRFANFNGTNRPDPTLDPAYREQLRRVCSSSETRANFDPTTPDKFDKNYYTNLQGLRGLLQSDQELFSTRGADTVAIVNRFAKNQDEFFKNFGRSMIKMGNISPLTGKKGEIRLNCRRVNSPPRADEGHDVI 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7503176 7505010 - CmoCh02G012520.1 Cmo02g01252 376849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01252 341 SUPERFAMILY Heme-dependent peroxidases 24 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo02g01252 341 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Cmo02g01252 341 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01252 341 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01252 341 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01252 341 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01252 341 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01252 341 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01252 341 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01252 341 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01252 341 CDD secretory_peroxidase 24 328 IPR033905 GO:0004601|GO:0042744
Cmo02g01252 341 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01252 341 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01252 341 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01252 341 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01252 341 PANTHER PEROXIDASE 58 16 329 - -
Cmo02g01252 341 ProSiteProfiles Plant heme peroxidase family profile. 24 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01252 341 Gene3D - 29 329 - -
Cmo02g01252 341 Gene3D Peroxidase, domain 2 168 308 - -
Cmo02g01252 341 Pfam Peroxidase 43 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01252 341 PANTHER PEROXIDASE 72-RELATED 16 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01252 Cmo-Chr2:7503176 Cmo20g00052 Cmo-Chr20:299374 7.54E-157 dispersed
Cmo15g01428 Cmo-Chr15:9709194 Cmo02g01252 Cmo-Chr2:7503176 2.58E-48 dispersed
Cmo15g01429 Cmo-Chr15:9709780 Cmo02g01252 Cmo-Chr2:7503176 1.61E-88 dispersed
Cmo20g00053 Cmo-Chr20:301075 Cmo02g01252 Cmo-Chr2:7503176 1.26E-59 dispersed
Cmo02g01251 Cmo-Chr2:7499807 Cmo02g01252 Cmo-Chr2:7503176 1.18E-145 tandem
Cmo02g01252 Cmo-Chr2:7503176 Cmo02g01253 Cmo-Chr2:7506324 1.10E-104 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01252 K00430 - csv:101211507 538.88