Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01253 ATGGAAACCTCCAGCTGCAGATTAAAGGGTCATTTTGCTTTGCTTATGATTGTCTTTCTCATGCTGTGTGGTGCCACAAGGGCACAGTTAACTGTGGATTTCTATAAGAGCTCGTGTCCAAACCTTCTCAGAATCGTGAGAAGAGAAGTCGTGAAAGCTATAAAGAGCGAGATGAGAACGGCAGCTTCACTCCTTCGCTTGCACTTCCACGACTGCTTTGTTAATGGTTGTGACGGATCAGTGCTGTTGGATGGAAGTGATGGGGAGCAATTTGCACTTCCCAACATCAATTCTCTTAGACGGCTTGAAGTGATTGATTCAATCAAAAGCGCGGTGGAGAATTCTTGTAGCGGAGTTGTGTCATGTGCTGATATATTAACCTTAGCTGCTAGAGACTCTGTTCTATTGAGTGGAGGACCAACATGGAAGGTTTTACTGGGGAGAAGAGATGGATTGGTGGCCAACAAAACTGGAGCAGATCAGGTACTGCCCGCTCCATTTGAGAACATTGATGGTATCCTCAAGAAGTTCACTGATGTTGGCCTTGATCTCACCGACGTCGTTGCTTTATCTGGAGCCCACACAATTGGGTTTGCAAGGTGTGCGATGTTCAACAATAGGCTATTCAACTTCTCAGGGAGTGGGTCGCCAGACCCCACCATGGAGAGCAGAATGGTGTCGGATCTGCAGGCGTTGTGCCCTCTCACCGACGATGGCAACAAGACCACAGTGCTGGACAGGAACTCTACGGATTTATTTGACAACCATTACTACAAGAACTTACTCAACCAAAAGGGGCTGTTGGAATCAGACCAAATTCTGTTCTCCAGCGCTGCAGCTCAAAGCAGCACAAAAAGCTTGGTGGAAGATTACAGCTCAAACACGACGCGTTTCTTTGAAGACTTTGTCAGGGCCATGATCAAGATGGGGAACATAAGCCCACTCACGGGCTCTAATGGAGAGATCCGAAAGAATTGTAGAGTGGTTAATTCCTAA 996 46.89 METSSCRLKGHFALLMIVFLMLCGATRAQLTVDFYKSSCPNLLRIVRREVVKAIKSEMRTAASLLRLHFHDCFVNGCDGSVLLDGSDGEQFALPNINSLRRLEVIDSIKSAVENSCSGVVSCADILTLAARDSVLLSGGPTWKVLLGRRDGLVANKTGADQVLPAPFENIDGILKKFTDVGLDLTDVVALSGAHTIGFARCAMFNNRLFNFSGSGSPDPTMESRMVSDLQALCPLTDDGNKTTVLDRNSTDLFDNHYYKNLLNQKGLLESDQILFSSAAAQSSTKSLVEDYSSNTTRFFEDFVRAMIKMGNISPLTGSNGEIRKNCRVVNS 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7506324 7508300 - CmoCh02G012530.1 Cmo02g01253 376850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01253 331 Gene3D - 33 330 - -
Cmo02g01253 331 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01253 331 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01253 331 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01253 331 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01253 331 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01253 331 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01253 331 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01253 331 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01253 331 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01253 331 SUPERFAMILY Heme-dependent peroxidases 29 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo02g01253 331 CDD secretory_peroxidase 29 329 IPR033905 GO:0004601|GO:0042744
Cmo02g01253 331 PANTHER PEROXIDASE 72-RELATED 14 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo02g01253 331 Gene3D Peroxidase, domain 2 164 309 - -
Cmo02g01253 331 PANTHER PEROXIDASE 59 14 329 - -
Cmo02g01253 331 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Cmo02g01253 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Cmo02g01253 331 Pfam Peroxidase 46 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01253 331 ProSiteProfiles Plant heme peroxidase family profile. 29 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01253 331 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01253 331 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01253 331 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01253 331 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo02g01253 331 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01253 Cmo-Chr2:7506324 Cmo03g01001 Cmo-Chr3:7539228 4.16E-115 dispersed
Cmo04g00875 Cmo-Chr4:4386702 Cmo02g01253 Cmo-Chr2:7506324 2.76E-94 dispersed
Cmo20g00055 Cmo-Chr20:306631 Cmo02g01253 Cmo-Chr2:7506324 1.38E-96 dispersed
Cmo02g01252 Cmo-Chr2:7503176 Cmo02g01253 Cmo-Chr2:7506324 1.10E-104 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01253 K00430 - csv:101211257 533.872