Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01256 ATGCGAGTAATATCTCGATTCTCTTCTGTGAGATACCAGTTCCTGAAGATGGCAGCTGCAGCTTCTAACATTCAGATAGCGACACTAAAACACTACCAATTGCCCTCAAGGAAAGGCTTCAAGCCATTTGGAACTACCCTTAGTGGCAATTCTAAAGCTCCATCATTCGCTAAGCTTTCGAGTTCTAGCAATATATCATCTTTACCATTTTTCCAGCAGAGGTTCGTCTCGTCTTCAGTGAAAAATGAGAGAATTGTAACCAAAGCAATGGCTGAAGCTAATGATAGTAAGCCTATCTCTGGGCTGTCAATTGATCTAAAAGGTAAGAGAGCATTTATCGCTGGTGTAGCTGATGATAATGGATATGGGTGGGCGATTGCAAAAGCTCTTGCGGCAGCTGGTGCTGAAATTCTTGTTGGCACGTGGGTGCCTGCCTTGAACATTTTTGAATCCAGCTTCAGACGTGGAAAGTTCGATGAATCGCGAGTACTGCCAGATGGTTCACTTATGGAGATCACAAAAGTATATCCTCTAGATGCAGTTTTTGACAGCCCGGAGGATGTTCCTGAAGATATAAAAACAAACAAACGCTATGCAGGATCCTCAAATTGGACTGTGAAGGAAGTTGCTGAGTGCGTGAAGCAAGATTTTGGCAGCATTGACATTCTTGTGCACTCCCTTGCTAATGGACCGGAGGTAACGAAACCTCTGTTGGAAACATCTCGGAATGGTTATCTAGCAGCTTTATCTGCATCAAGCTACTCTTATATATCTCTACTGAAGCATTTCGTTCCAATCATGAATCCAGGTGGTGCTTCATTATCCCTCACGTACATAGCTTCTGAAAGAATCATTCCAGGGTATGGAGGTGGCATGAGTTCTGCCAAGGCTGCTTTGGAGAGTGATACACGAGTACTTGCTTTTGAAGCTGGAAGAAAGCACAAAATCAGAGTCAACACAATATCTGCGGGTCCACTAAGAAGTCGAGCTGCAAAAGCAATCGGGTTTATTGACATGATGATTGACTATTCATCGGTCAATGCACCTCTGCAGAAAGAACTATCTGCTGAGGAGGTGGGGAATACAGCTGCCTTCTTGGCATCACCTCTGGCTTCTGCTATTACTGGAGCTGTTATTTATGTAGATAATGGTTTGAATGCAATGGGCGTGGGAGTTGATAGCCCGATGTTCAAGGATCTAGATATTCCAACAGACAAGCACTAA 1224 43.79 MRVISRFSSVRYQFLKMAAAASNIQIATLKHYQLPSRKGFKPFGTTLSGNSKAPSFAKLSSSSNISSLPFFQQRFVSSSVKNERIVTKAMAEANDSKPISGLSIDLKGKRAFIAGVADDNGYGWAIAKALAAAGAEILVGTWVPALNIFESSFRRGKFDESRVLPDGSLMEITKVYPLDAVFDSPEDVPEDIKTNKRYAGSSNWTVKEVAECVKQDFGSIDILVHSLANGPEVTKPLLETSRNGYLAALSASSYSYISLLKHFVPIMNPGGASLSLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKHKIRVNTISAGPLRSRAAKAIGFIDMMIDYSSVNAPLQKELSAEEVGNTAAFLASPLASAITGAVIYVDNGLNAMGVGVDSPMFKDLDIPTDKH 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7518436 7523159 + CmoCh02G012560.1 Cmo02g01256 376853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01256 407 PANTHER ENOYL-ACYL-CARRIER REDUCTASE 17 406 - -
Cmo02g01256 407 CDD ENR_SDR 108 389 IPR014358 GO:0004318|GO:0006633
Cmo02g01256 407 Gene3D Enoyl acyl carrier protein reductase 336 393 - -
Cmo02g01256 407 PRINTS Glucose/ribitol dehydrogenase family signature 314 331 IPR002347 -
Cmo02g01256 407 PRINTS Glucose/ribitol dehydrogenase family signature 349 369 IPR002347 -
Cmo02g01256 407 PRINTS Glucose/ribitol dehydrogenase family signature 292 311 IPR002347 -
Cmo02g01256 407 PRINTS Glucose/ribitol dehydrogenase family signature 218 229 IPR002347 -
Cmo02g01256 407 PANTHER ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE 17 406 IPR014358 GO:0004318|GO:0006633
Cmo02g01256 407 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 107 389 IPR036291 -
Cmo02g01256 407 Pfam Enoyl-(Acyl carrier protein) reductase 205 386 - -
Cmo02g01256 407 Gene3D - 109 335 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g01256 Cmo11g00834 CCT
Cmo02g01256 Cmo11g00834 ECH
Cmo02g01256 Cmo20g00061 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01256 Cmo-Chr2:7518436 Cmo04g01235 Cmo-Chr4:6278066 4.03E-09 dispersed
Cmo11g00834 Cmo-Chr11:4237476 Cmo02g01256 Cmo-Chr2:7518436 2.31E-169 wgd
Cmo02g01256 Cmo-Chr2:7518436 Cmo20g00061 Cmo-Chr20:338649 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01256 K00208 - csv:101210519 696.427