Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01283 ATGGATTCAGAGGATTTGAGAGATTACTACAAGACTGGTATAACAAAGGAGGCCTCTTGGAGGGTGTCACAGCTCAAAGCCTTACGCCAACTTATAGAACACAATGAACACCAAATTTACACCGCCCTTATGCAAGATTTGGGGAAACACCATGTTGAAGCTTTTAGAGATGAGATTGGTACTCTGCAAAAGTCCCTCAACTCTGCTTTGGATAATTTGAAGCATTGGATGTCACCCAAAAAGGCAAAGCTGCCATTAATAGCGTTGTTAAGCTCAGCTGAAATGGTTCCTCAGCCTTTGGGCGTTGTTCTTATAATCTCATCTTGGAATTTTCCGATTGGGTTGTCGTTGGAGCCGTTGATTGGAGCAATAGCTGCCGGAAATTGCGTGGTTCTGAAGACGTCGGAATCTGCTCCGGCGAGTTCGGCTTTGCTGGCGAATACCATCCGGAAATATGTTGATAATAAAGCTGTGAGGGTTGTGGAAGGTGGGGCGGCGGCTGGGGAGCGGCTGCTGCAGCAGCGGTGGGAGAAGATTTTCTTTACAGGTGGAAGAAGTGACCGAGTGGGGCGGATTGTTATGGCGGCCGCCGCGAAACACCTGACGCCGGTGACTTTGGAGCTCGGCGGGAAGTGCCCGGCCATCGTTGACTCACTCTCATTTTCATGGGACATTGAGGTTCGTTTACTTTCTTTGGGACAAATAGGACATGATTCTTCTTCGATTTTGACCTGCAAGGCTACTGCCAAACGGATCGTCATCGGAAAATTCGGGAACTGCGCCGGTCAAGCTTGCATTGCGATCGATTATGTCCTCATTGAACATAGGTTCATACCTACCTTGGTCGAATTGATGAAGAAGTTCATCAAGGAATTCTTCGATAGAAGTTCGAACCAGGCGAAAACCATGGCGAGGATCGTAAACAAACAAAATTTCTTGAGATTGAAGAATCTGGTGGATAAACCTGACGTACGAGCTTCGATCATCTATGGGGGATCCATGGACGAAGACAAATTGTTTGTTGAGCCGACTATTCTGTTGAATCCGCCAAGCGATGCAGAAATTATGACGGATGAAATCTTCGGACCATTGCTTCCCATAATTGGACTGGACAGGATTGAAGACAGTATAGATTTCATCAATTCAAAGCCTAAGCCTCTCGCCGTTTATGCCTTCACGAAGGATAAAGCTTTCCAAAGGAGACTCGTCTCAGAAACCTCGTCCGGCAGTTTGACATTCAATGATGCAATTATTCAGTATGCAGCCGATACACTCCCGTTTGGAGGGGTTGGTGAAAGTGGGATTGGAAGGTACCATGGAAAATTCTCATTCGACACTTTTAGTCATGAAAAGGCTGTTCTGCAGAGGAGCTTTTTGGTTGACTTCTGGTTCAGATATCCGCCATGGAACAGTCACAAGCTTCAGCTGCTTCGAGAAGCTTACAGTCTTAACTATTTTCAGCTTGTTCTCACTGTTTTGGGTTTGAAAAAGTCTTAA 1497 46.09 MDSEDLRDYYKTGITKEASWRVSQLKALRQLIEHNEHQIYTALMQDLGKHHVEAFRDEIGTLQKSLNSALDNLKHWMSPKKAKLPLIALLSSAEMVPQPLGVVLIISSWNFPIGLSLEPLIGAIAAGNCVVLKTSESAPASSALLANTIRKYVDNKAVRVVEGGAAAGERLLQQRWEKIFFTGGRSDRVGRIVMAAAAKHLTPVTLELGGKCPAIVDSLSFSWDIEVRLLSLGQIGHDSSSILTCKATAKRIVIGKFGNCAGQACIAIDYVLIEHRFIPTLVELMKKFIKEFFDRSSNQAKTMARIVNKQNFLRLKNLVDKPDVRASIIYGGSMDEDKLFVEPTILLNPPSDAEIMTDEIFGPLLPIIGLDRIEDSIDFINSKPKPLAVYAFTKDKAFQRRLVSETSSGSLTFNDAIIQYAADTLPFGGVGESGIGRYHGKFSFDTFSHEKAVLQRSFLVDFWFRYPPWNSHKLQLLREAYSLNYFQLVLTVLGLKKS 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7648030 7651335 - CmoCh02G012830.1 Cmo02g01283 376880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01283 498 PANTHER ALDEHYDE DEHYDROGENASE 4 227 IPR012394 GO:0006081
Cmo02g01283 498 PANTHER ALDEHYDE DEHYDROGENASE 243 498 IPR012394 GO:0006081
Cmo02g01283 498 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 7 208 IPR016162 GO:0016491
Cmo02g01283 498 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 434 448 IPR016162 GO:0016491
Cmo02g01283 498 SUPERFAMILY ALDH-like 7 470 IPR016161 GO:0016491
Cmo02g01283 498 PIRSF ALDH 238 492 IPR012394 GO:0006081
Cmo02g01283 498 PIRSF ALDH 2 237 IPR012394 GO:0006081
Cmo02g01283 498 PANTHER ALDEHYDE DEHYDROGENASE 4 227 - -
Cmo02g01283 498 Pfam Aldehyde dehydrogenase family 18 217 IPR015590 GO:0016491
Cmo02g01283 498 Pfam Aldehyde dehydrogenase family 247 453 IPR015590 GO:0016491
Cmo02g01283 498 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 246 433 IPR016163 GO:0016620
Cmo02g01283 498 PANTHER ALDEHYDE DEHYDROGENASE 243 498 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01283 Cmo-Chr2:7648030 Cmo16g00705 Cmo-Chr16:3511971 0 dispersed
Cmo02g01283 Cmo-Chr2:7648030 Cmo01g01433 Cmo-Chr1:11208760 1.00E-157 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01283 K00128 - csv:101205263 769.615