Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01287 ATGGCTTCGTTGGCGCTTACTTCCTCGTTTCTCCCTTCTCTCCAATCGCGCCGTCGGAAACCGGAGGTAAATTCTCAAATCCGCTTCTCCTCTCTCCGTTCAACTCTTCCTAAAACCGCCATTTTCGAGAGCGGCGTCAGAACTAGCTTCCGCATTCCGTCTTCTCTATCCAGTGAAGCTAAATCGATTAAACCAGCTCTAGATTTCAGAAGCTCTCGTGGAAATCTCGGTACCTTTACTGTCCGAGCGGCTTCCTCTTCTCCTGCTACTGTAGCTCCGGCTTCTCAGCCATGGCAAGGTGCGGCGATTAAGCCACTTATTGCTTCCATTGCTACGGGTATCATTCTGTGGTTTGTTCCGGTCCCGTCTGGTGTTTCTCGTAACGCGTGGCAATTGCTTGCGATTTTCCTTGCTACGATTGTTGGGATTATTACTCAGCCTTTGCCCCTTGGTGCTGTTGCTTTGCTTGGACTTGGCGCCTCTGTTCTAACTAAAACCCTAACCTTCTCTGCTGCTTTCTCTGCGTTTGGTGATCCGATCCCATGGCTCATCGCTCTTGCCTTCTTCTTTGCTCGAGGGTTCATTAAGACCGGACTAGGTAATCGAATTGCTTATCAATTTGTTTCTCTATTCGGTAGTTCGACGTTAGGGTTAGGGTATAGTTTAGTGTTCAGTGAGGCTCTGTTGGCGCCGGCAATTCCTTCGGTGTCTGCCAGAGCAGGAGGAATATTCCTTCCATTGGTGAAATCGCTCTGTGTTGCTTGCGGTAGCAATGCTGGTGATGGCACAGAAAAACGGTTGGGATCGTGGTTGATGCTCACTTGCTTTCAAACGTCGGTGATTTCATCATCCATGTTCTTGACGGCTATGGCTGCTAATCCTCTCAGTGCCACTCTGACGTATAACACGATCAAGCAGACCATTGGATGGACCGACTGGGCTAAAGCAGCCATTGTTCCAGGATTAATCTCCTTGATTGTGGTGCCATTGCTTCTGTATGTAATCTATCCGCCCACCGTGAAGAGCAGTCCAGACGCACCCAAGCTTGCCAGAGAGAAGTTAGAAAAGATGGGACCAATGTCCAACAACGAGATTATAATGGCTGGAACTCTGCTTCTCACGGTGGGTCTTTGGGTTTTTGGAGGGATTCTTAATGTGGACGCTGTTACTGCTGCCATTTTGGGATTGTCCGTCCTTCTTGTGACTGGGGTGGTGACATGGAAAGAGTGCTTGGCAGAAGCTGTTGCCTGGGACACTCTAACATGGTTTGCTGCACTCATTGCAATGGCAGGGTATCTCAACAAATATGGTCTCATCTCCTGGTTTAGCCAAACTGTAGTGAAGTTTGTTGGTGGACTTGGGCTTTCATGGCATCTTTCATTCGGCATTTTAGTTCTTCTCTATTTCTACTCCCACTACTTCTTTGCGAGTGGAGCAGCTCATATAGGCGCTATGTTTACAGCCTTCTTATCCGTTGCTAGTGCTTTGGGGACTCCCCCCTACTTCGGAGCCATTGTACTTTCCTTCTTATCCAACCTGATGGGTGGCTTAACCCACTACGGCATTGGGTCAGCCCCTGTCTTCTATGGTGCCAACTATGTTCCTCTTGCTCAGTGGTGGGGCTACGGGTTCCTCATATCTGTTGTCAACATCATTATCTGGCTCGGCGCTGGGGGAATTTGGTGGAAGGCCATTGGTCTATGA 1704 49.0 MASLALTSSFLPSLQSRRRKPEVNSQIRFSSLRSTLPKTAIFESGVRTSFRIPSSLSSEAKSIKPALDFRSSRGNLGTFTVRAASSSPATVAPASQPWQGAAIKPLIASIATGIILWFVPVPSGVSRNAWQLLAIFLATIVGIITQPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVSLFGSSTLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNAGDGTEKRLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTYNTIKQTIGWTDWAKAAIVPGLISLIVVPLLLYVIYPPTVKSSPDAPKLAREKLEKMGPMSNNEIIMAGTLLLTVGLWVFGGILNVDAVTAAILGLSVLLVTGVVTWKECLAEAVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWHLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVASALGTPPYFGAIVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLAQWWGYGFLISVVNIIIWLGAGGIWWKAIGL 567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7670439 7673728 + CmoCh02G012870.1 Cmo02g01287 376884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01287 567 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 77 567 IPR030676 -
Cmo02g01287 567 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 77 567 - -
Cmo02g01287 567 CDD ArsB_NhaD_permease 140 562 - -
Cmo02g01287 567 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 120 562 IPR001898 GO:0016020|GO:0022857|GO:0055085
Cmo02g01287 567 Pfam Sodium:sulfate symporter transmembrane region 105 566 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g01287 Cmo20g00085 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01287 Cmo-Chr2:7670439 Cmo16g00263 Cmo-Chr16:1165773 6.99E-159 dispersed
Cmo02g01287 Cmo-Chr2:7670439 Cmo20g00085 Cmo-Chr20:442145 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01287 - - bhj:120088316 956.051