Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01310 ATGGCGCCCGAAAATTTTCCCATATTGTTTTCCTTCATCGCCGCCCTCTTAGCCGCCATTTTCACCTCTGCAAATGGGTCGGAAAGAAAAGCTCATATTGTTTACATGGGCGCAGTCCAAAACAGAGCAATGGCGGAATCGACCCACCATTTGAATCTTCTTCGTTCGGTGATTGGAACCTCTTCCGTAATGGAAGGTTCTTACATTCGTAGCTATGGAAGAAGCTTTAATGGATTTGTTGCGAAACTCACCGGAGGTGAAGCAGAGCAACTCGCCGCCATGGACGGCGTGGTCTCTGTTTTCGAAAGTAAGGTATTCAAAACCCAGACGACAAGATCATGGGATTATTTGGGATTCCCTGCAAAACCCACAAGAAATCTCGCCGGTGAAACTGACGTCATAATTGGGTCAATCGACACGGGGATTTGGCCGGAATTGGAAAGCTTCAACGACGAGGGTATAGGTCCACCGCCGGCGCGGTGGAGAGGTACATGTACCGGAGGAGGGAATTTCACGTGCAACAATAAAGTGATCGGAGCTCGTTTTTACACCTCCATGTCCGCCAGAGACAACGTCGGCCATGGCTCTCACACCGCCTCTACAGCTGCCGGAAAATCAGGGAAAACGACTGGTTTTTATGGACTTGCCGGCGGAGTTGCCAGGGGAGCAGTTCCTTCTTCGAGACTAGCGATTTATAAAGCTTGCAATCCGGATTGCTTAGAAGAGAATATTCTGGCGGCGTTTGACGACGCCATCGCCGACGGCGTGGATCTTATCACGATTTCAATTGTCGGAGCTGGTGGGTTTAATTTTGAACATGACTCGATGGCAATTGGGTCTTACCACTCGATGGCTAAAGGAATCTTAACCGTCCAATCCGCCGGAAATTATGGGCCGGAGGACGGAACAGTGGGAAGTGTAGTTCCGTGGGTGTTCACCGTCGCCGCCACCAACACAGACAGAACCATCGTAGACAAGGTTGTTCTCGGCGACGGAAACACCGTGAATGGGTATTCCGTCAACACCTTCGCTCCAAACCAAAACGTTCCATTAATTTACGCAACAAACGCTTCCAGAAACTGTTCATCAAAAAATGCAGAAATTTGCAGAGATGGTTGCTTGGATCCATTGTTGGTGAAAGGGAAGATCGTTCAATGTAAGGCCTTCGACGGCGCTTCCAGAGCTTTCAACGCCGGAGCCGCCGGAGCAATTGTTCTTAACGACAATGCCGCCAATGTTTCCTTCGTTCTTCCCTTCCCTGCAATCGCTTTGAAAATGGCGGATTATAAAAGTGTTGCAAATTACGCAATCTCTGCAACAAATCCCAATGTCACGATCTTTAGAAGCGTCGCTACTAAAGATCCTCACGCGCCGATGATCGCCGATTTCTCTAGCCGCGGCCCCAACATGTGGATGCTGGAGATCTTGAAGCCCGACATTGCCGCCCCCGGCGTCGAAATCCTCGCCTCGTTTTCTCCGATCGCGGCTCCTTCCGGCAATGTCGGAGACAAAAGATCTGTCGAATTTTCGATTCTGTCCGGCACTTCCATGTCTTGTCCCCACGTCGCCGGTGTCGCCGCTTATGTAAAGAGTTTCCATCCAAATTGGTCGCCGGCAGCGATCAAATCAGCCATCATGACGACGGCTAAACAAATCGTTCGTACGGATGGAATTTTAATTCGTGAATTTCTTTACGGGTCGGGTTTGGTCGATCCAGATCGAGCAATCGAACCCGGGCTTGTTTATGAAATTTTTGAAAAAGATCACTTGAATATGCTATGTGCAAAGGGGTATGATTCAAAGACGATGAAAGCATTTGCAGGAAACGATAGTGTTTGTCCGAAAACTTGGACGAAATATCTTGCTCGAGATTTGAATTACCCTGCAATGGTAGCTCATGTTCTACCGATGAAACCATTTGTGGTTAAGTTTCAAAGAACTGTGACTAATGTTGGGGTTGCGAACTCAACTTATAGATCGAAGATTTTGTCGTTTTCTGGAGTTAATGTTTTGAAGTCATTGGAAAAACTTAGTGTGAGTGTTAAGCCTCAGAAACTATGGTTTGGAAATTTGAATGAGAAGAAGAGTTTTGTTGTGACGGTGGTTGGAGGGACAATTCCAACCAAGATTGTACTTTCTTCGGTGTTAATATGGAGTGACCTGGACCATGAGGTCAGGAGTCCGATTGTTGTCATGGTCAAACCACCACTCTAA 2214 47.7 MAPENFPILFSFIAALLAAIFTSANGSERKAHIVYMGAVQNRAMAESTHHLNLLRSVIGTSSVMEGSYIRSYGRSFNGFVAKLTGGEAEQLAAMDGVVSVFESKVFKTQTTRSWDYLGFPAKPTRNLAGETDVIIGSIDTGIWPELESFNDEGIGPPPARWRGTCTGGGNFTCNNKVIGARFYTSMSARDNVGHGSHTASTAAGKSGKTTGFYGLAGGVARGAVPSSRLAIYKACNPDCLEENILAAFDDAIADGVDLITISIVGAGGFNFEHDSMAIGSYHSMAKGILTVQSAGNYGPEDGTVGSVVPWVFTVAATNTDRTIVDKVVLGDGNTVNGYSVNTFAPNQNVPLIYATNASRNCSSKNAEICRDGCLDPLLVKGKIVQCKAFDGASRAFNAGAAGAIVLNDNAANVSFVLPFPAIALKMADYKSVANYAISATNPNVTIFRSVATKDPHAPMIADFSSRGPNMWMLEILKPDIAAPGVEILASFSPIAAPSGNVGDKRSVEFSILSGTSMSCPHVAGVAAYVKSFHPNWSPAAIKSAIMTTAKQIVRTDGILIREFLYGSGLVDPDRAIEPGLVYEIFEKDHLNMLCAKGYDSKTMKAFAGNDSVCPKTWTKYLARDLNYPAMVAHVLPMKPFVVKFQRTVTNVGVANSTYRSKILSFSGVNVLKSLEKLSVSVKPQKLWFGNLNEKKSFVVTVVGGTIPTKIVLSSVLIWSDLDHEVRSPIVVMVKPPL 737
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7780292 7782505 - CmoCh02G013100.1 Cmo02g01310 376907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01310 737 Pfam Subtilase family 132 552 IPR000209 GO:0006508|GO:0008236
Cmo02g01310 737 CDD Peptidases_S8_3 106 549 IPR034197 -
Cmo02g01310 737 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 108 IPR037045 -
Cmo02g01310 737 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 733 IPR045051 -
Cmo02g01310 737 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Cmo02g01310 737 PRINTS Subtilisin serine protease family (S8) signature 190 203 IPR015500 -
Cmo02g01310 737 PRINTS Subtilisin serine protease family (S8) signature 513 529 IPR015500 -
Cmo02g01310 737 Pfam Fibronectin type-III domain 624 731 IPR041469 -
Cmo02g01310 737 Gene3D - 593 733 - -
Cmo02g01310 737 Gene3D - 320 453 - -
Cmo02g01310 737 Pfam Peptidase inhibitor I9 32 108 IPR010259 -
Cmo02g01310 737 ProSitePatterns Serine proteases, subtilase family, serine active site. 514 524 IPR023828 -
Cmo02g01310 737 CDD PA_subtilisin_like 327 446 - -
Cmo02g01310 737 Gene3D Peptidase S8/S53 domain 132 588 IPR036852 GO:0004252|GO:0006508
Cmo02g01310 737 ProSiteProfiles Serine proteases, subtilase domain profile. 113 576 - -
Cmo02g01310 737 SUPERFAMILY Subtilisin-like 109 580 IPR036852 GO:0004252|GO:0006508
Cmo02g01310 737 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 31 733 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01310 Cmo-Chr2:7780292 Cmo04g00572 Cmo-Chr4:2848730 0 dispersed
Cmo02g01310 Cmo-Chr2:7780292 Cmo02g01311 Cmo-Chr2:7783732 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01310 - - cmax:111490708 1364.75