Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01376 ATGGAGTCCTCTCACGACGATATCGCCGACGACCTACAGAGCTTGAGCTTCAACTCCACCAACACTAATCGCAGCACTAGCTCCGGCTCCGAGACTACTCTCACCGCCTCCTCCTCCTCCTTCGTTCATATCCCTTCCACTTTCAACAAGCCTCACGCGCCTTCCTCCGACCCTTGCTGGTCAGCTGTTAGCCGGATCCGATCCGAATCGTCTACTCGCCAACTCGCCTTCTCCGACCTTAAGTTCTCGCACCGTCTTGGCTCTGGCGACATTGGCTCCGTCTACCTCGCTGGACTTAAGTCCGCTGGAGATGACGGATGTCTCTTCGCGGCGAAGGTGATGGATAAGAAGGAATTGGCGAGTCGAAGTAAAGAAGGCAGAGCGAGGACTGAGAGGGAGATTTTGGAGTGTTTGGACCATCCGTTTCTTCCAAAGCTCTATGCTAGTATCGACTCGCCGAAATGGCTCTGTCTCTTGACTGAGTTCTGCCACGGCGGCGACCTCCATGTTCTCCGGCAACGGCAGCCAAACAAACGCTTCGGTGAACTCGCCGTGAGATTCTATGCATCAGAGATAGTAGTTGCTATTGAGTACCTTCACATGATGGGGATTGTTTACCGTGATTTGAAGCCGGAAAATGTGCTGGTACGATCGGACGGCCATATCATGCTCACTGATTTTGATCTCTCCTTGAAGTGTGAGGATTCAACAGCGACCCCACAGGTTATCACTGCCAAAAATGCAACAAATGGCACTGCCCGGCCAAAGAACTGCCAAATTGAGGCCCCTCCTTTCACATCCTCCTCCTGCATACTTCCAAACTGCATAGTCCCGGCAATGTCGTGTTTCAACCCGAAACGCAAGCGCAAGAAGAAGTCTAGCCACAGCAATGGACCTGAGTTTGTTGCTGAGCCGGTCGACGTCCGGTCCATGTCGTTTGTTGGCACCCACGAGTATTTGGCGCCAGAGATTGTCTCTGGTGAGGGCCATGGAAGTGCAGTGGATTGGTGGACTTTAGGGGTGTTTGTGTTTGAGTTGTTTTATGGAGTGACACCCTTTAGAGGCATGGACAATGAGCTCACCTTGGCCAACATAGTGGCCAGAGCCCTTGAGTTTCCTAAAGAACCAGTGGTGCCGACGGCGGCGAAGGACCTCATATCGCAATTACTGGTCAAAGATCCGGCAAGGCGGCTGGGGTCAACAACAGGGTCGTCGGCGATCAAGCACCACTCATTTTTCCAAGGGGTAAATTGGGCATTACTGAGATAA 1269 52.56 MESSHDDIADDLQSLSFNSTNTNRSTSSGSETTLTASSSSFVHIPSTFNKPHAPSSDPCWSAVSRIRSESSTRQLAFSDLKFSHRLGSGDIGSVYLAGLKSAGDDGCLFAAKVMDKKELASRSKEGRARTEREILECLDHPFLPKLYASIDSPKWLCLLTEFCHGGDLHVLRQRQPNKRFGELAVRFYASEIVVAIEYLHMMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCEDSTATPQVITAKNATNGTARPKNCQIEAPPFTSSSCILPNCIVPAMSCFNPKRKRKKKSSHSNGPEFVAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGVFVFELFYGVTPFRGMDNELTLANIVARALEFPKEPVVPTAAKDLISQLLVKDPARRLGSTTGSSAIKHHSFFQGVNWALLR 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8174219 8178858 - CmoCh02G013760.1 Cmo02g01376 376973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01376 422 Gene3D Phosphorylase Kinase; domain 1 79 166 - -
Cmo02g01376 422 MobiDBLite consensus disorder prediction 1 32 - -
Cmo02g01376 422 MobiDBLite consensus disorder prediction 10 32 - -
Cmo02g01376 422 SMART serkin_6 80 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g01376 422 SUPERFAMILY Protein kinase-like (PK-like) 57 421 IPR011009 -
Cmo02g01376 422 PANTHER FLIPPASE KINASE 1-RELATED 2 422 - -
Cmo02g01376 422 Pfam Protein kinase domain 310 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g01376 422 Pfam Protein kinase domain 83 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g01376 422 Gene3D Transferase(Phosphotransferase) domain 1 309 421 - -
Cmo02g01376 422 Gene3D Transferase(Phosphotransferase) domain 1 167 238 - -
Cmo02g01376 422 ProSiteProfiles Protein kinase domain profile. 80 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g01376 422 PANTHER OS11G0150700 PROTEIN 2 422 - -
Cmo02g01376 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g01376 Cmo20g00198 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01376 Cmo-Chr2:8174219 Cmo03g00624 Cmo-Chr3:5785792 3.36E-141 dispersed
Cmo02g01376 Cmo-Chr2:8174219 Cmo02g01378 Cmo-Chr2:8182901 1.13E-135 proximal
Cmo02g01376 Cmo-Chr2:8174219 Cmo20g00198 Cmo-Chr20:969271 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74140 PF00069 Pkinase 9.00E-35 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01376 K08286 - csv:101207262 746.117