Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01379 ATGAGGGCGTTGCAATTGCAGCTTAGAGTTGACGCCAATTTTCTAAGGCCTTACAGTCATTTCTGTCCTACTTCATCACTAAACCCTTCGTCATTGCTTGTTTGTCAACCTATAAAATTCTCCCATCTCCGAAACTTTAAGCCTTCTCGAAGTTCCCGTGGAACCCATTTCTCTACACCATCGACTTCTTTCATTGTAGCTTCCATGGCCGATAACGCCATTCCCACAATCCCAGAGACAGCGACAAAACCTTTCTCTGTGCTCTTTGTGTGCTTGGGAAACATCTGCAGAAGCCCAGCTGCTGAAGGAGTATTCAGAGACCTGGTGAAGAAGAGGGGTCTCGATTCCAAGTTCATAATAGATTCTGCTGGCACCATTGGTTACCATGAGGGTAATGAGGCCGACCCAAGAATGAGAGCAGCCTCTAAACGGCGCGGGATAGCGATAACATCCATATCGAGGCCAATCCAGCCATCTGATTTTGTAAATTTTGATCTTATTCTTGCCATGGACAAGCAAAACAGAGGTAGGAGAGAATACTATGGCAAAATCTTCGTATTTGTGCTATGTTTTGCAATTCCAATCATTCCCAGGTCAACTCAATCTTTGTTAATGATTCATTTTCTGGAGGATATTTTAGGGGCTTTTGAACGGTGGAGAACTAAGAATACCCTCCCTCCTGATTCGCATAAGAAGGTCAAATTAATGTGCTCATACTGTAAAAGGCATAATGAAACAGAGGTACCGGATCCTTATTATGGTGGGCAACAAGGTTTTGAGAAGGTTCTGGACTTGCTTGAAGATGCGTGTGAATCACTGTTGGAAAGCATCTTAGCAGAGAACAAACACTTTTCAGAGTTGCTATGGCTGAATAACTTTAGAATCTCACGAATTCAGGCATTGAAATTGAAAAGAGACATTATTTCAATAAAAAAGTTCCAAGATTCCAAGACTCCTCGGACTCTTCATGGAAAGGTAACTTGTGCAGCTTTGTACCAGAGGACTTACAATTCTGCATCATTGCAGCAGCCAGCCATGGAATATGATAAAACACAAAATGGTACCCATATATTTGAAAAATACAGGCTGTGTTATCCCCCAAAAGGAGGAGGAGACTGA 1119 42.45 MRALQLQLRVDANFLRPYSHFCPTSSLNPSSLLVCQPIKFSHLRNFKPSRSSRGTHFSTPSTSFIVASMADNAIPTIPETATKPFSVLFVCLGNICRSPAAEGVFRDLVKKRGLDSKFIIDSAGTIGYHEGNEADPRMRAASKRRGIAITSISRPIQPSDFVNFDLILAMDKQNRGRREYYGKIFVFVLCFAIPIIPRSTQSLLMIHFLEDILGAFERWRTKNTLPPDSHKKVKLMCSYCKRHNETEVPDPYYGGQQGFEKVLDLLEDACESLLESILAENKHFSELLWLNNFRISRIQALKLKRDIISIKKFQDSKTPRTLHGKVTCAALYQRTYNSASLQQPAMEYDKTQNGTHIFEKYRLCYPPKGGGD 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8186285 8189431 + CmoCh02G013790.1 Cmo02g01379 376976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01379 372 Gene3D - 71 282 - -
Cmo02g01379 372 CDD LMWPTP 86 275 - -
Cmo02g01379 372 SUPERFAMILY Phosphotyrosine protein phosphatases I 222 277 IPR036196 -
Cmo02g01379 372 SUPERFAMILY Phosphotyrosine protein phosphatases I 83 185 IPR036196 -
Cmo02g01379 372 PRINTS LMW phosphotyrosine protein phosphatase signature 130 146 IPR017867 GO:0004725|GO:0006470
Cmo02g01379 372 PRINTS LMW phosphotyrosine protein phosphatase signature 87 104 IPR017867 GO:0004725|GO:0006470
Cmo02g01379 372 PRINTS LMW phosphotyrosine protein phosphatase signature 163 178 IPR017867 GO:0004725|GO:0006470
Cmo02g01379 372 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 210 282 - -
Cmo02g01379 372 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 50 175 - -
Cmo02g01379 372 Pfam Low molecular weight phosphotyrosine protein phosphatase 87 176 IPR023485 -
Cmo02g01379 372 Pfam Low molecular weight phosphotyrosine protein phosphatase 222 274 IPR023485 -
Cmo02g01379 372 SMART LMWPc_2 85 276 IPR023485 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01379 K25307 - csv:101207515 397.897