Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01390 ATGGAGTTTTGGGGTGTTGAAGTCAAGCCTGGTCAGTCACTCGTTGTGAAGCCTGGAATTCAGCAATACCTGCATCTATCACAGGCGACTCTAGGTGAAACAAAGAAGGACAAAGCAAATGAAAACGTGACTATCTTCTTGAAGATTGGTGGCCAAAAGCTTGTTCTTGGCATTCTCTCCGCAGAGAAGTTTCCCCAGCTATCATTTGATCTTGTGTTTGAGAAGGAATTTGAGCTCTCCCATAATGGGAAAGGTGGAAGTGTTTACTGTGCTGGATACCAGGCTTATGCCGAGGATCAAGATCCATATCCTTTCTTGCCTTTTTGA 327 44.34 MEFWGVEVKPGQSLVVKPGIQQYLHLSQATLGETKKDKANENVTIFLKIGGQKLVLGILSAEKFPQLSFDLVFEKEFELSHNGKGGSVYCAGYQAYAEDQDPYPFLPF 108
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8246222 8246949 + CmoCh02G013900.1 Cmo02g01390 376987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01390 108 Pfam Nucleoplasmin-like domain 3 93 IPR041232 -
Cmo02g01390 108 Gene3D Nucleoplasmin core domain 1 100 - -
Cmo02g01390 108 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 1 99 - -
Cmo02g01390 108 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 1 99 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g01390 Cmo06g00436 CCT
Cmo02g01390 Cmo06g00436 ECH
Cmo02g01390 Cmo20g00250 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01390 Cmo-Chr2:8246222 Cmo20g00577 Cmo-Chr20:2839723 2.76E-41 dispersed
Cmo02g01389 Cmo-Chr2:8237086 Cmo02g01390 Cmo-Chr2:8246222 4.29E-41 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01390 - - cpep:111777607 187.963