Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01463 ATGGCTACTAAAGACTCGAGTTCTGCGAGTGAGGGCAAGATTAAAGGGGTTCTCACCCATGGCGGCCGATATGTGCAGTATAACGTCTACGGTAACTTGTTTGAGGTTTCGGCTAAGTATGTTCCTCCTTTGCGACCCATTGGTAGAGGCGCTTATGGTCTTGTTTGTGCTGCTGTAAATTCTGAGACACATGAGGAGGTTGCTATCAAGAAAATTGGAAATGCATTTGATAACATAATCGATGCTAAGAGGACATTGAGAGAAATTAAGCTTCTTTGCCACATGGAACATGAAAATATTATCGCCATCAGAGACATCATTCGACCCCCAAAAAGAGAGGTCTTTAATGATGTGTACATTGTTTACGAGTTGATGGATACCGATCTTCATCAAATAATTCGCTCTGACCAATCGCTGACAGATGACCATTGCCAGTACTTTATGTATCAGTTATTGCGCGGGCTGAAATATGTACATTCAGCCAAGGTCCTGCACCGTGATCTGAAGCCAAGCAACCTGCTACTGAATGCAAACTGCGACCTTAAAATTGGAGACTTTGGGTTGGCAAGGACAACGTCTGAAACTGACTTCATGACTGAATATGTGGTCACTCGCTGGTACCGAGCGCCAGAATTGTTGCTCAATTGTTCGGAGTACACTGCCGCCATTGATGTCTGGTCTGTTGGATGCATACTTGGTGAGATCATGACCCGAGAGCCTCTCTTCCCTGGAAAAGATTATGTTCATCAACTAAGACTTATAACTGAGCTACTTGGATCACCAGATGATGCCAGTCTAGGATTTCTTCGAAGCGACAACGCTCGAAGATATGTCAAGCAGCTTCCTGAATACAAGAAACAACAATTCTCAACTAGATTTCCCAACATGTCTCCAGCTGCATTGGATCTTCTAGAAAAGATGCTCGTGTTTGATCCAAACAAACGCATCACAGTTGAGGAGGCACTCTGTCATCCATACTTGCAATCTCTTCACGACATCAACGACGAGCCAGTGTGTGGCAGACCTTTCAATTTTGATTTCGAGCAACCATCGTGCACTGAAGAGCATATCAAAGAACTGATCTGGAAAGAATGTGTCCGGTTCAATCCTGATGAATCAGCGAGGAGGACGACCCTTTGCGTTTAA 1146 44.33 MATKDSSSASEGKIKGVLTHGGRYVQYNVYGNLFEVSAKYVPPLRPIGRGAYGLVCAAVNSETHEEVAIKKIGNAFDNIIDAKRTLREIKLLCHMEHENIIAIRDIIRPPKREVFNDVYIVYELMDTDLHQIIRSDQSLTDDHCQYFMYQLLRGLKYVHSAKVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDVWSVGCILGEIMTREPLFPGKDYVHQLRLITELLGSPDDASLGFLRSDNARRYVKQLPEYKKQQFSTRFPNMSPAALDLLEKMLVFDPNKRITVEEALCHPYLQSLHDINDEPVCGRPFNFDFEQPSCTEEHIKELIWKECVRFNPDESARRTTLCV 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8598641 8602744 + CmoCh02G014630.1 Cmo02g01463 377060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01463 381 ProSitePatterns Protein kinases ATP-binding region signature. 47 71 IPR017441 GO:0005524
Cmo02g01463 381 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11-RELATED 16 372 - -
Cmo02g01463 381 Gene3D Transferase(Phosphotransferase) domain 1 125 354 - -
Cmo02g01463 381 ProSiteProfiles Protein kinase domain profile. 41 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g01463 381 CDD STKc_TEY_MAPK 34 370 - -
Cmo02g01463 381 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 372 - -
Cmo02g01463 381 SMART serkin_6 41 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g01463 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Cmo02g01463 381 SUPERFAMILY Protein kinase-like (PK-like) 44 335 IPR011009 -
Cmo02g01463 381 ProSitePatterns MAP kinase signature. 76 179 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cmo02g01463 381 Pfam Protein kinase domain 45 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g01463 381 Gene3D Phosphorylase Kinase; domain 1 24 364 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g01463 Cmo15g01314 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01463 Cmo-Chr2:8598641 Cmo08g00862 Cmo-Chr8:5567966 0 dispersed
Cmo15g01314 Cmo-Chr15:9024086 Cmo02g01463 Cmo-Chr2:8598641 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74145 PF00069 Pkinase 9.90E-72 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01463 - - csv:101214254 759.599