Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01465 ATGTTGGCGGCTGCGTTGATTCTGTTCTTTGGGTACACTTTTATGATCATTACACTCTCTGTTGCTTTGCTTCTCAACACTTGTGATTCCTCCGCCGTCGCCGTCGCCGCGCTCCTCCTTCTCTTATCTCATCTGGGTTTGTTGAAACAAGAACAAGCTGTCGGACAAAGGGATTCCGAATTAAAGTCTGTAATTTTGTGGTTGTTGATGGCTCGAGAGCTTTGTGAAGGAGAAGAGAAATCGAACGAGATGGTAGTTGGAGGAGGAGGATTTTACTACAATTCGAATTCTAACTTGAACATCCAAACCCAATTCACGAGCCAGATCCAAACTGGGTTTGGATCCGGCGGTGATCCGGCGGAGATGTTCAATTTGGGGACTAACGAGTCAACCGGCGGCGATGAGTTTCATCAGAACATGATGGTGGTTGGGCCGTGGGGGACAGCAGCGCAAGACAGCAATAACAGATTCCATTTAGTCGATGATGATTCTGCTTTGAGATGTGTGTTTCCATGTGAACCCAATGAGAGGCCAAGCCAAGGCCTTTCTTTGTCTCTTAGTTCCTCTAATCCTTCTTCTATTGGCTTACAATCTTTTGAACTCAGACCCCAACAAAATCAACACCAATCATCATCTCTCCCCATTTTTCAGCTTCGAAACTCCAGGTTTCTGGCCCCAGCTCAGGACCTTCTTTATGAGTTTTGTAGCCTTGGAATCACCATTAACAACAACAACAACAAACAAGGCCTTGATTTCTCTTCCTCACCAAAACACAAAGGGAATAAGCCAAAACAATGGGAAATGGAAGATGGGTCTTCTTCTACCAAGATTTCTCTCCAATCACTTGATTTCATGGACTTGCAAAGGAGAAAAACCAAGCTTTTTTCCATGCTTGAAGAGGTTGAAAGAAGGTATAGGCATTACTGCGAGCAAATGAAGGCGGTGGTAGCATCATTCGAGGCTGTGGCAGGGAGTGGGGCGGCGAGGGTATACTCAGCGTTGGCTTCGAAGGCGATGTCGAGGCATTTTAGGTGCCTAAAAGATGGGATTGTGGGACAAATTCAGGCCACAAAAAAGGCAATAGAAGAAAAGGATCCAATTACTCCAGGCACCACAAGAGGAGAAACGCCAAGGCTTAAAGTCATCGATCAAGCTTTAAGGCAACAAAGAGCTTTCCATCAAATAAGCATGATGGAGAGCCATCCATGGCGCCCTCAACGTGGCCTCCCTGAGCGTTCTGTTTCTGTTCTTCGCGCTTGGCTTTTCGAACACTTTCTTCACCCGTACCCTAGCGATGTGGATAAACATATTTTAGCTCGCCAAACTGGTCTCTCAAGAAGCCAGGCAAGTCCAAAAAACACATTACAAAAAACCCTACTTCATCATATTCCGTTCAACCACCTTCTTATTTTATTGAAATGTTTGATTGTAGGGCTGTTTGTGTTTGTTGTGTCGAATTGGTTCATTAATGCGAGGGTGAGGTTGTGGAAGCCAATGGTGGAAGAGATGTATTTAGAAGAAACCAAGGAGCAAGGAGAAGAAATCAACAACAATTTTAATGGGCATTCTTCCGATGGGGTGGCGGATTTCGACGACGAAATCGATGGTCATCGGTCGATCCCGACACGGTTGGTGGATCAAAAGCCGACGCCAGACCAACTCTTGAGAATTGAGTCGGAATGTATGTCTTCAATCATCTCTAACAACTCAGAAAAGAATGGTTCAAGAAGCACGAAAGCAATGGAAAACCAGAGTTTTGGGCGAGTTGGCGCGGATGCATTTGGCACAGTGGAGCTTGACTTCTCATCGTACAACAACCACCACTCCAGTAGCGGTGGCAGAGGTGGTGTGTCGTTGACATTAGGGTTACAACAACATGCAACACAAACCTCGGTTTTCTTCAGAAGAGATGAAATGGAAGAGTGTGAACCCATTCAATATTCACTTTTAGACGGAGAAACTCAGAATCTTCCTTACAGAAACTTGATGGGTGCTCAATTGCTTCACGACTTGGCCGAATAA 2022 45.35 MLAAALILFFGYTFMIITLSVALLLNTCDSSAVAVAALLLLLSHLGLLKQEQAVGQRDSELKSVILWLLMARELCEGEEKSNEMVVGGGGFYYNSNSNLNIQTQFTSQIQTGFGSGGDPAEMFNLGTNESTGGDEFHQNMMVVGPWGTAAQDSNNRFHLVDDDSALRCVFPCEPNERPSQGLSLSLSSSNPSSIGLQSFELRPQQNQHQSSSLPIFQLRNSRFLAPAQDLLYEFCSLGITINNNNNKQGLDFSSSPKHKGNKPKQWEMEDGSSSTKISLQSLDFMDLQRRKTKLFSMLEEVERRYRHYCEQMKAVVASFEAVAGSGAARVYSALASKAMSRHFRCLKDGIVGQIQATKKAIEEKDPITPGTTRGETPRLKVIDQALRQQRAFHQISMMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQASPKNTLQKTLLHHIPFNHLLILLKCLIVGLFVFVVSNWFINARVRLWKPMVEEMYLEETKEQGEEINNNFNGHSSDGVADFDDEIDGHRSIPTRLVDQKPTPDQLLRIESECMSSIISNNSEKNGSRSTKAMENQSFGRVGADAFGTVELDFSSYNNHHSSSGGRGGVSLTLGLQQHATQTSVFFRRDEMEECEPIQYSLLDGETQNLPYRNLMGAQLLHDLAE 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8606548 8610022 - CmoCh02G014650.1 Cmo02g01465 377062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01465 673 Gene3D - 406 503 - -
Cmo02g01465 673 SMART prehox3 212 352 IPR006563 -
Cmo02g01465 673 MobiDBLite consensus disorder prediction 247 273 - -
Cmo02g01465 673 Pfam Homeobox KN domain 420 494 IPR008422 GO:0003677|GO:0006355
Cmo02g01465 673 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 484 634 - -
Cmo02g01465 673 SUPERFAMILY Homeodomain-like 396 448 IPR009057 -
Cmo02g01465 673 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 80 450 - -
Cmo02g01465 673 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 484 634 - -
Cmo02g01465 673 Pfam Associated with HOX 218 350 IPR006563 -
Cmo02g01465 673 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 80 450 - -
Cmo02g01465 673 SMART HOX_1 403 502 IPR001356 GO:0003677
Cmo02g01465 673 CDD homeodomain 403 499 IPR001356 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g01465 Cmo15g01310 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00570 Cmo-Chr2:3314129 Cmo02g01465 Cmo-Chr2:8606548 1.84E-90 dispersed
Cmo02g01465 Cmo-Chr2:8606548 Cmo20g01176 Cmo-Chr20:11619666 2.43E-87 dispersed
Cmo15g01310 Cmo-Chr15:9005443 Cmo02g01465 Cmo-Chr2:8606548 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01465 - - cmo:103482774 768.459