Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo02g01497 | ATGCTGAAGTTGCCGCGGCGGAAACGCTCGCCGGCGGCAACGAATCAGGAGAACGCGAATGATGTAGCGAATATTGACAATGACGAGACGGCGGCGGGGGTGAGAAAGGCGGCGGAAGCGAAAGTGGTGCTCTGTGTTTCCGGCATGACTTGCTCTGCTTGCGCTGTTTCAGTAGAGAATTCCATCAAACATCTTCCAGGCATTCTCGATGCTGCTATCGATTTCTTGAACGATAGGGCTCAAATCCGCTATCTCCCCAATCTCATCGATGAAGATTCAATAGTTAAAGCAATTGAAAATGCTGGATTTCAAGCTACGATATCGAAGGACAGCGCCGATCATCGATCGAGAGAAGTATGTCGAATCCGAGTAAATGGGATGGGCTGCAATTCTTGCTCTTCCATGGTAGAATCAGTTTTGGAAGAAATGTACGGCGTCCAAAAGACTCACATTGCTCTCTTCAATGGGGAAGCAGAAGTTCACTATGATCCAAAGGTCGTTAACTCCACTCAGTTCATTGTAGCCATACAAGACATTGGCTTTGATGCCTTACTTATAACCATTGGCGAACACATTAGCAAGATTGAGCTCAAGATCGATGGCATGCATAACGAAAACTCATCGACAAAAGTTAAAGAATCGCTTGAATCGGTTGTCGGAATCGAAGATGTCGATATCGACATGGGATTGACCAAAGTTACCATATCTTACAAGCCTGATATAACAGGACCAAGAACTTTCATTGAAGTGATCGAGTCGATCAAATCCGAGCATTTCAAGGCCACGATATATCCCGCAAATGTGGGTCGAGAAAATCGTAAGGAGAAAGAAATTAAACAGCACTATAAGTACTTCTTATGGAGCTCAGCTCTTTCTGTTCCTGTTTTCTTAACATCCATGGTGTTTATGTATATACCTGGAATTAAGCAGATTTTGGATATCAAAGTAGTCAATATGATGAATGTTGGACATCTTATCAAGTGGAATTTGTCCACTCCTGTCCAGTTCATCATAGGTTCAAGATTCTACATTGGATCATACAAAGCATTGCGCCGTGGTTCTGCCAACATGGATGTATTGATCACTTTGGGAACCAATGCAGCTTATTTCTATTCTGTTTATATTGTTCTAAGAGCAGCTACTTCCCCTGCTTTTGATGGGACAGATTTCTTTGAGACTAGCTCAATGCTGATCACTTTCATTCTACTTGGTAAGTATTTGGAGATTCTAGCTAAAGGAAAGACCTCTGAGGCCATTGCTAAGCTTAAGCACTTGGCGCCCGAGACCGCGACGCTCTTGACTCTAGATGGCCATGGAAATGTGATAAGTGAAGTAGAAATCAGCGGTGAGCTGATTCAGAAGAATGATGTTATTAAGATTACGCCTGGTGCGAAGGTAGCTTCCGATGGCCTCGTCGTCTGGGGCGAAAGTCATGTCAATGAGAGTATGATTACCGGAGAAGCGAAACCGGTAGCGAAAAGGACAGGCGACAAGGTAATAGGAGGAACTATGAATGAGAATGGAGTGTTGCATATTAAGGCAACACATGTTGGATCAGAGAGTTCACTAGCGCAAATCGTTCAACTCGTCGAATCGTCTCAGTTGGCGAAAGCTCCTATTCAGAAACTTGCAGACCATATCTCCAAGTATTTTGTGCCTCTGGTAATTTTGCTTTCTTTTCTCACTTGGATTGCCTGGTTTTTAGCTGGAAAGTTGCATTTGTATCCTAAGTCCTGGTTGCCTTCTTCAATGGACCGTTTTGAACTAGCTCTCCAATTTGGGATTTCTGTTATGGTCATAGCTTGCCCTTGTGCTCTTGGCCTTGCCACCCCGACCGCTGTGATGGTCGGGACCGGTGTCGGTGCATCTCAAGGTGTACTAATCAAAGGCGGCCAAGCTTTAGAATTTGCACATAAGGCGAGCTGCATTGTGTTTGATAAGACAGGAACGCTAACAGTTGGAAAGCCAGTGGTTGTAAATGTAAAACTAATGGACACTATAGTACTTGAAGAACTGCTTGAACTCACTGCTGCTACTGAGGTGAACAGTGAGCATCCAATAGCCAAGGCCATTGTTGAATATGCTAAGCAATTCAAGGAAGATAACCCCATTTGGCCTGAAGCTCAAGAGTTCATATCCATTCCTGGACATGGAGTGGAAGCCATTGTAAGGAACAAGAAAGTTGTGGTTGGAAACAAGAGCTTGATGATGAACAATGGCATAGAAATTCTTGGGGAAACGGAGAGCTTCCTTGTCGACGCCGAAGGTATGGCGAAAACCGCGGTTTTGGTGGCCGTAGATCGAACGGTGTCGGGAGTTATCGTGGTGTCGGATCCATTGAAACCAGGAGCCAAAGAGGTGATCTCCATTCTCAAATCTATGGAAGTAAAGAGCATAATGGTAACAGGTGACAATTGGGGGACTGCAAATTCCATTGCCAAAGAAGTTGGAATAGAAACGGTCATTGCAGAGGCCAAGCCTCAGCAGAAAGCAGAGGAAGTGAAGAATCTTCAGACGGCCGGGCACACGGTGGCAATGGTGGGAGACGGGATCAATGACTCGCCCGCCCTTGTAGCAGCCGATGTCGGGATGGCTATCGGAGCTGGCACAGACATCGCCATTGAGGCAGCAGACATTGTTCTTATGAAAAATGACTTACAAGATGTTATAACTGCCATTCATCTCTCAAGGAGAACTTTTGCTAGAATTCGCCTCAATTACATTTGGGCTCTTGGTTATAATCTTCTTGCCATTCCGATTGCCGCAGGCGTCTTGTTCCCTTCAACACGGTTTCGGCTACCACCGTGGATCGCCGGAGCTGCCATGGCTGCTTCTTCTGTTAGTGTGGTATGCAGTTCTTTGATGTTGAAGAAGTACAAGAGACCAAAGAAGCTTGATGAAATTGATATTCAAATGAAAGGAATAATAGTTCAATGA | 2937 | 44.98 | MLKLPRRKRSPAATNQENANDVANIDNDETAAGVRKAAEAKVVLCVSGMTCSACAVSVENSIKHLPGILDAAIDFLNDRAQIRYLPNLIDEDSIVKAIENAGFQATISKDSADHRSREVCRIRVNGMGCNSCSSMVESVLEEMYGVQKTHIALFNGEAEVHYDPKVVNSTQFIVAIQDIGFDALLITIGEHISKIELKIDGMHNENSSTKVKESLESVVGIEDVDIDMGLTKVTISYKPDITGPRTFIEVIESIKSEHFKATIYPANVGRENRKEKEIKQHYKYFLWSSALSVPVFLTSMVFMYIPGIKQILDIKVVNMMNVGHLIKWNLSTPVQFIIGSRFYIGSYKALRRGSANMDVLITLGTNAAYFYSVYIVLRAATSPAFDGTDFFETSSMLITFILLGKYLEILAKGKTSEAIAKLKHLAPETATLLTLDGHGNVISEVEISGELIQKNDVIKITPGAKVASDGLVVWGESHVNESMITGEAKPVAKRTGDKVIGGTMNENGVLHIKATHVGSESSLAQIVQLVESSQLAKAPIQKLADHISKYFVPLVILLSFLTWIAWFLAGKLHLYPKSWLPSSMDRFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALEFAHKASCIVFDKTGTLTVGKPVVVNVKLMDTIVLEELLELTAATEVNSEHPIAKAIVEYAKQFKEDNPIWPEAQEFISIPGHGVEAIVRNKKVVVGNKSLMMNNGIEILGETESFLVDAEGMAKTAVLVAVDRTVSGVIVVSDPLKPGAKEVISILKSMEVKSIMVTGDNWGTANSIAKEVGIETVIAEAKPQQKAEEVKNLQTAGHTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKNDLQDVITAIHLSRRTFARIRLNYIWALGYNLLAIPIAAGVLFPSTRFRLPPWIAGAAMAASSVSVVCSSLMLKKYKRPKKLDEIDIQMKGIIVQ | 978 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 8752694 | 8757356 | - | CmoCh02G014970.1 | Cmo02g01497 | 377094 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo02g01497 | 978 | Pfam | haloacid dehalogenase-like hydrolase | 642 | 861 | - | - | |
Cmo02g01497 | 978 | SUPERFAMILY | HMA, heavy metal-associated domain | 188 | 255 | IPR036163 | GO:0046872 | |
Cmo02g01497 | 978 | Pfam | E1-E2 ATPase | 425 | 622 | - | - | |
Cmo02g01497 | 978 | SUPERFAMILY | HMA, heavy metal-associated domain | 119 | 188 | IPR036163 | GO:0046872 | |
Cmo02g01497 | 978 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 392 | 926 | IPR023298 | - | |
Cmo02g01497 | 978 | CDD | HMA | 196 | 262 | IPR006121 | GO:0046872 | |
Cmo02g01497 | 978 | Gene3D | - | 412 | 534 | - | - | |
Cmo02g01497 | 978 | SFLD | p-type atpase | 626 | 899 | IPR044492 | - | |
Cmo02g01497 | 978 | PANTHER | ATP7, ISOFORM B | 30 | 967 | - | - | |
Cmo02g01497 | 978 | CDD | P-type_ATPase_Cu-like | 285 | 943 | - | - | |
Cmo02g01497 | 978 | CDD | HMA | 122 | 183 | IPR006121 | GO:0046872 | |
Cmo02g01497 | 978 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 397 | 929 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo02g01497 | 978 | PRINTS | Copper-transporting ATPase 1 signature | 41 | 66 | - | - | |
Cmo02g01497 | 978 | PRINTS | Copper-transporting ATPase 1 signature | 67 | 90 | - | - | |
Cmo02g01497 | 978 | PRINTS | Copper-transporting ATPase 1 signature | 96 | 116 | - | - | |
Cmo02g01497 | 978 | PRINTS | Copper-transporting ATPase 1 signature | 142 | 163 | - | - | |
Cmo02g01497 | 978 | ProSiteProfiles | Heavy-metal-associated domain profile. | 41 | 107 | IPR006121 | GO:0046872 | |
Cmo02g01497 | 978 | Gene3D | - | 651 | 726 | IPR023299 | GO:0000166 | |
Cmo02g01497 | 978 | Gene3D | - | 727 | 778 | IPR023299 | GO:0000166 | |
Cmo02g01497 | 978 | PRINTS | P-type cation-transporting ATPase superfamily signature | 480 | 494 | - | - | |
Cmo02g01497 | 978 | PRINTS | P-type cation-transporting ATPase superfamily signature | 644 | 658 | - | - | |
Cmo02g01497 | 978 | PRINTS | P-type cation-transporting ATPase superfamily signature | 772 | 783 | - | - | |
Cmo02g01497 | 978 | PRINTS | P-type cation-transporting ATPase superfamily signature | 794 | 804 | - | - | |
Cmo02g01497 | 978 | PRINTS | P-type cation-transporting ATPase superfamily signature | 847 | 866 | - | - | |
Cmo02g01497 | 978 | PRINTS | P-type cation-transporting ATPase superfamily signature | 870 | 882 | - | - | |
Cmo02g01497 | 978 | PANTHER | COPPER-TRANSPORTING ATPASE HMA5-RELATED | 30 | 967 | - | - | |
Cmo02g01497 | 978 | TIGRFAM | ATPase-IB_hvy: heavy metal translocating P-type ATPase | 357 | 956 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Cmo02g01497 | 978 | ProSiteProfiles | Heavy-metal-associated domain profile. | 119 | 185 | IPR006121 | GO:0046872 | |
Cmo02g01497 | 978 | SUPERFAMILY | Calcium ATPase, transduction domain A | 444 | 530 | IPR008250 | - | |
Cmo02g01497 | 978 | Gene3D | - | 117 | 187 | - | - | |
Cmo02g01497 | 978 | Gene3D | - | 33 | 113 | - | - | |
Cmo02g01497 | 978 | SUPERFAMILY | HAD-like | 643 | 953 | IPR036412 | - | |
Cmo02g01497 | 978 | Pfam | Heavy-metal-associated domain | 197 | 254 | IPR006121 | GO:0046872 | |
Cmo02g01497 | 978 | Pfam | Heavy-metal-associated domain | 46 | 103 | IPR006121 | GO:0046872 | |
Cmo02g01497 | 978 | Pfam | Heavy-metal-associated domain | 122 | 182 | IPR006121 | GO:0046872 | |
Cmo02g01497 | 978 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Cmo02g01497 | 978 | Gene3D | - | 611 | 904 | IPR023214 | - | |
Cmo02g01497 | 978 | ProSiteProfiles | Heavy-metal-associated domain profile. | 194 | 263 | IPR006121 | GO:0046872 | |
Cmo02g01497 | 978 | SUPERFAMILY | HMA, heavy metal-associated domain | 39 | 108 | IPR036163 | GO:0046872 | |
Cmo02g01497 | 978 | ProSitePatterns | Heavy-metal-associated domain. | 124 | 154 | IPR017969 | GO:0046872 | |
Cmo02g01497 | 978 | Gene3D | - | 194 | 263 | - | - | |
Cmo02g01497 | 978 | CDD | HMA | 46 | 106 | IPR006121 | GO:0046872 | |
Cmo02g01497 | 978 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 646 | 652 | IPR018303 | - | |
Cmo02g01497 | 978 | ProSitePatterns | Heavy-metal-associated domain. | 46 | 75 | IPR017969 | GO:0046872 | |
Cmo02g01497 | 978 | SFLD | C1.7: P-type atpase like | 626 | 899 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00531 | Cmo-Chr2:3007937 | Cmo02g01497 | Cmo-Chr2:8752694 | 0 | dispersed | |
Cmo02g01497 | Cmo-Chr2:8752694 | Cmo07g01190 | Cmo-Chr7:6446516 | 0 | dispersed | |
Cmo02g01497 | Cmo-Chr2:8752694 | Cmo03g00234 | Cmo-Chr3:3602692 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo02g01497 | K17686 | - | csv:101220448 | 1663.28 |