Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01531 ATGCAAGAACCTGGGTTGGGAATGATGACTGCTGCTGCTGCTGCTGCCGCCGCCGCCTCTACTGCTGCCTTAAGCGGCGACGTTTCCATCTCCGGCGACAACGCCCAACTCAAGGCTGAGATTGCTACTCATCCGCTCTATGAGCAGCTTTTAGCCGCACATGTTGCTTGTCTTCGTGTTGCTACTCCGATTGACCAGCTTCCAATCATCGACGCTCAGTTGGCTCAATCGCACCACGTTTTGCGATCTTATGCCTCTCAGCAGCATCACCAACATGCCCATTCCTTATCGCCTCACGAGCGCCAAGAACTCGACAATTTCCTTGCGCAGTATATGATCGTTTTGTGCTCTTTTAAAGACCAGCTTCAGCAACATGTGAGGGTTCACGCAGTGGAAGCTGTTATGGCATGCCGTGAAATTGAAAATACTCTACAAGCTCTTACAGGAGTGAGCCTTGGTGAAGGAAGCGGTGCAACGATGTCAGACGACGATGACGACGTTCCCATGGAGTTTTCGCTTGATCAATCTGGTGGTGATGCACACGACATGATGGGGTTTGGACCGCTGCTTCCAACCGAATCGGAAAGGTCGTTGATGGAGAGGGTTCGACAAGAATTGAAGATTGAGCTAAAACAGGGATGGTTTGTTTGGGATTTAGAAGGGGTCAAGAACGTGATGGTATTTTGGTTGCAGGGATTCAAGTCAAGAATTGAGGACGTGAGAGAGGAGATACTGAGAAAAAGAAGGGCAGGGAAGTTGCCTGGTGATACAACCACAGTATTGAAGAACTGGTGGCAGCAGCATTCCAAGTGGCCATACCCAACGAGTTTTGAAGTTGGAATCTCTACAACATCTCGTCTTTCCTTTGCGATTGCAGGAAGACGACAAGGCGAAGCTGGTGGAGGAGACGGGGTTGCAGCTGAAACAAATAAACAATTGGTTCATCAACCAAAGGAAGAGAAACTGGCACAGCAACTCTCAATCAGTAACATCCCTGAAGTCAAAGCGCAAGAGATAAGGAAATCATATGATATGTTGTATTGTAGGTTTGGCAAAAGTATGGTCTGA 1068 48.41 MQEPGLGMMTAAAAAAAAASTAALSGDVSISGDNAQLKAEIATHPLYEQLLAAHVACLRVATPIDQLPIIDAQLAQSHHVLRSYASQQHHQHAHSLSPHERQELDNFLAQYMIVLCSFKDQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGSGATMSDDDDDVPMEFSLDQSGGDAHDMMGFGPLLPTESERSLMERVRQELKIELKQGWFVWDLEGVKNVMVFWLQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTSFEVGISTTSRLSFAIAGRRQGEAGGGDGVAAETNKQLVHQPKEEKLAQQLSISNIPEVKAQEIRKSYDMLYCRFGKSMV 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8896584 8899700 - CmoCh02G015310.1 Cmo02g01531 377128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01531 355 SMART KNOX1_2 35 79 IPR005540 GO:0003677|GO:0005634
Cmo02g01531 355 SMART KNOX2_2 94 149 IPR005541 GO:0003677|GO:0005634
Cmo02g01531 355 Pfam KNOX1 domain 37 78 IPR005540 GO:0003677|GO:0005634
Cmo02g01531 355 Gene3D - 231 330 - -
Cmo02g01531 355 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 7 2 214 - -
Cmo02g01531 355 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 7 229 276 - -
Cmo02g01531 355 Pfam KNOX2 domain 97 148 IPR005541 GO:0003677|GO:0005634
Cmo02g01531 355 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 2 214 - -
Cmo02g01531 355 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 229 276 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g01531 Cmo15g01252 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01531 Cmo-Chr2:8896584 Cmo09g00434 Cmo-Chr9:1954115 1.81E-93 dispersed
Cmo15g01252 Cmo-Chr15:8604183 Cmo02g01531 Cmo-Chr2:8896584 8.68E-139 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01531 - - cmos:111459669 485.723