Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo02g01531 | ATGCAAGAACCTGGGTTGGGAATGATGACTGCTGCTGCTGCTGCTGCCGCCGCCGCCTCTACTGCTGCCTTAAGCGGCGACGTTTCCATCTCCGGCGACAACGCCCAACTCAAGGCTGAGATTGCTACTCATCCGCTCTATGAGCAGCTTTTAGCCGCACATGTTGCTTGTCTTCGTGTTGCTACTCCGATTGACCAGCTTCCAATCATCGACGCTCAGTTGGCTCAATCGCACCACGTTTTGCGATCTTATGCCTCTCAGCAGCATCACCAACATGCCCATTCCTTATCGCCTCACGAGCGCCAAGAACTCGACAATTTCCTTGCGCAGTATATGATCGTTTTGTGCTCTTTTAAAGACCAGCTTCAGCAACATGTGAGGGTTCACGCAGTGGAAGCTGTTATGGCATGCCGTGAAATTGAAAATACTCTACAAGCTCTTACAGGAGTGAGCCTTGGTGAAGGAAGCGGTGCAACGATGTCAGACGACGATGACGACGTTCCCATGGAGTTTTCGCTTGATCAATCTGGTGGTGATGCACACGACATGATGGGGTTTGGACCGCTGCTTCCAACCGAATCGGAAAGGTCGTTGATGGAGAGGGTTCGACAAGAATTGAAGATTGAGCTAAAACAGGGATGGTTTGTTTGGGATTTAGAAGGGGTCAAGAACGTGATGGTATTTTGGTTGCAGGGATTCAAGTCAAGAATTGAGGACGTGAGAGAGGAGATACTGAGAAAAAGAAGGGCAGGGAAGTTGCCTGGTGATACAACCACAGTATTGAAGAACTGGTGGCAGCAGCATTCCAAGTGGCCATACCCAACGAGTTTTGAAGTTGGAATCTCTACAACATCTCGTCTTTCCTTTGCGATTGCAGGAAGACGACAAGGCGAAGCTGGTGGAGGAGACGGGGTTGCAGCTGAAACAAATAAACAATTGGTTCATCAACCAAAGGAAGAGAAACTGGCACAGCAACTCTCAATCAGTAACATCCCTGAAGTCAAAGCGCAAGAGATAAGGAAATCATATGATATGTTGTATTGTAGGTTTGGCAAAAGTATGGTCTGA | 1068 | 48.41 | MQEPGLGMMTAAAAAAAAASTAALSGDVSISGDNAQLKAEIATHPLYEQLLAAHVACLRVATPIDQLPIIDAQLAQSHHVLRSYASQQHHQHAHSLSPHERQELDNFLAQYMIVLCSFKDQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGSGATMSDDDDDVPMEFSLDQSGGDAHDMMGFGPLLPTESERSLMERVRQELKIELKQGWFVWDLEGVKNVMVFWLQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTSFEVGISTTSRLSFAIAGRRQGEAGGGDGVAAETNKQLVHQPKEEKLAQQLSISNIPEVKAQEIRKSYDMLYCRFGKSMV | 355 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 8896584 | 8899700 | - | CmoCh02G015310.1 | Cmo02g01531 | 377128 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo02g01531 | 355 | SMART | KNOX1_2 | 35 | 79 | IPR005540 | GO:0003677|GO:0005634 | |
Cmo02g01531 | 355 | SMART | KNOX2_2 | 94 | 149 | IPR005541 | GO:0003677|GO:0005634 | |
Cmo02g01531 | 355 | Pfam | KNOX1 domain | 37 | 78 | IPR005540 | GO:0003677|GO:0005634 | |
Cmo02g01531 | 355 | Gene3D | - | 231 | 330 | - | - | |
Cmo02g01531 | 355 | PANTHER | HOMEOBOX PROTEIN KNOTTED-1-LIKE 7 | 2 | 214 | - | - | |
Cmo02g01531 | 355 | PANTHER | HOMEOBOX PROTEIN KNOTTED-1-LIKE 7 | 229 | 276 | - | - | |
Cmo02g01531 | 355 | Pfam | KNOX2 domain | 97 | 148 | IPR005541 | GO:0003677|GO:0005634 | |
Cmo02g01531 | 355 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 2 | 214 | - | - | |
Cmo02g01531 | 355 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 229 | 276 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo02g01531 | Cmo15g01252 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g01531 | Cmo-Chr2:8896584 | Cmo09g00434 | Cmo-Chr9:1954115 | 1.81E-93 | dispersed | |
Cmo15g01252 | Cmo-Chr15:8604183 | Cmo02g01531 | Cmo-Chr2:8896584 | 8.68E-139 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo02g01531 | - | - | cmos:111459669 | 485.723 |