Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01565 ATGGAACCCACTTTCAATTTCCTTCAATCTCTCAATTCCTTGTTTCCATGGCACTCCGGCCACAATTACCCCTTCATTTTCACTCTCCTTGCCGGTTTTCTCGTTCTTTTGTCTTTCAGATCCCGGCGCCGGCGCTTGCAGCTTCCACCCGGACCCCCCGGCGTTCCTCTGCTTGGAAATCTACCGTTTCTAGATCCAGAGCTTCACACTTACTTCACCGAATTGGCCCGAAAATACGGTCCAATTGTAAAGCTCCAACTCGGTTCAAAGATCGGTATAATCATCAACTCGCCCTCTGTCGCACGTGAGGTGTTGAAGGACCACGATATCACGTTCGCCAACCACGACGTTCCTCGCGCAGCCAGAGCCGCCACATACGGCGGTTACGACATAGTTTGGAGTCCTTACGGACCCGAGTGGCGGATGATGAGAAAAGTTTGTACCATCAAGATGCTCAGTAACGCTAGTTTGGACTCTGTCTACGAGCTCCGCCGTAGAGAGGTCAGAAACACCGTTGCTCACCTATACCGGCGAGCCGGGTCGGCGGTGAACATAGGAGAGCAGGGGTTTTTGACGGTTTTCAACATCGTGACGAGTATGTTGTGGGGTGGGTCGGTGGACGGGGACGAAAGGGACGGGATTGCGGCTGAGTTCAGAGAGCTAATTTCGGACATAACTTTGCTGTTGGGTAAGCCTAATGTGTCGGACTTTTTCCCGAGCTTGGCTCGTTTCGATCTCCAAGGCATCGAGAAACAAATGCTTAATCTCGCACCAAAATTGGACAACATCTTCGAAAAGATGATCAATCAACGACTGAGAATGGCCGATGCGGACGAGAAGCAGAACAAAAACGATTTCTTGCAATTCTTACTTCAGATCAAAGATGAAGGCGATTCCAAAACGCCTCTCACCATGGTTCAAATCAAAGGCGTGCTCATGGACATGGTGGTAGGTGGAACAGACACATCCTCAAACACCATTGAGTTCGCAATGGCAGAGATGATGAAGAACCCAAATGTTCTAAAGAAAGTGCAAGAAGAATTAGCCGTCGTGATCGGAGACGAGAACATCGTAGAAGAGTCCCATATTGAGAGTCTGCCATATCTGAAAGCCGTAGTGAAAGAAACGTTGCGTCTGCATCCAGTGTTGCCGCTGCTAGTGCCGCACTGTCCGAGCGAGAGCACCATGATATCTAATTACACAATCCCAAAGGGGTGTCGAGTTTTCATCAACGTCTGGGCCATTCAGCGAGACCCCAATCAATGGAAAGACCCATTGGAGTTTGAGCCGGAGAGATTCTTGAATCATAAGATGGATTTCAACGGGAGTGACTTTCGATTCATTCCATTTGGATCAGGGAGAAGAAACTGCGCAGGGACAGGGTTGGCGGAAAGAATGATCATGTATTTGCTTGCGACGTTTCTGCACTCGTTTGATTGGAAACTGAAAGAGGGTGAGGAATTGAAGACCGACGACAAATTTGGGATTGTTTTGAAGATGAAGACTCCTCTGGTTGCCATCTGCACTCCCAGGCTCTCTCACCCCACTCTGTATCAGTAA 1560 49.1 MEPTFNFLQSLNSLFPWHSGHNYPFIFTLLAGFLVLLSFRSRRRRLQLPPGPPGVPLLGNLPFLDPELHTYFTELARKYGPIVKLQLGSKIGIIINSPSVAREVLKDHDITFANHDVPRAARAATYGGYDIVWSPYGPEWRMMRKVCTIKMLSNASLDSVYELRRREVRNTVAHLYRRAGSAVNIGEQGFLTVFNIVTSMLWGGSVDGDERDGIAAEFRELISDITLLLGKPNVSDFFPSLARFDLQGIEKQMLNLAPKLDNIFEKMINQRLRMADADEKQNKNDFLQFLLQIKDEGDSKTPLTMVQIKGVLMDMVVGGTDTSSNTIEFAMAEMMKNPNVLKKVQEELAVVIGDENIVEESHIESLPYLKAVVKETLRLHPVLPLLVPHCPSESTMISNYTIPKGCRVFINVWAIQRDPNQWKDPLEFEPERFLNHKMDFNGSDFRFIPFGSGRRNCAGTGLAERMIMYLLATFLHSFDWKLKEGEELKTDDKFGIVLKMKTPLVAICTPRLSHPTLYQ 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9044170 9045989 - CmoCh02G015650.1 Cmo02g01565 377162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01565 519 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01565 519 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01565 519 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01565 519 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01565 519 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01565 519 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01565 519 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01565 519 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01565 519 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01565 519 SUPERFAMILY Cytochrome P450 49 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01565 519 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 26 519 - -
Cmo02g01565 519 Gene3D Cytochrome P450 36 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01565 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Cmo02g01565 519 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01565 519 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01565 519 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01565 519 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo02g01565 519 PANTHER OS08G0547900 PROTEIN 26 519 - -
Cmo02g01565 519 Pfam Cytochrome P450 49 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01565 Cmo-Chr2:9044170 Cmo15g01221 Cmo-Chr15:8431889 0 dispersed
Cmo02g01563 Cmo-Chr2:9037961 Cmo02g01565 Cmo-Chr2:9044170 4.59E-59 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01565 - - csv:101213781 763.837