Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01581 ATGAAGATTGGAGCGATGGAAGATGTGGCAATAATTGGAGGATTGATTTCAGTGCAGTTCATATACGCTGGAAACTCGGTATTGCTAAGTTATTTGATGTCGTTAGGGCTCAATCCTCTCAACATCGTCATTTATATTGCCTCTGCCACATTTCTATTTTTGGCTCCTCTGGCTGTTTGTTTTGAAAGGAGCAATTGGCCCAAGAAATTGAGTTTCAAGTTGGTGCTTCAGCTTGTTCTGATCTCCTTTGGCGGGGTAACTTTGTTCCAAACTCTGCTATTAGAAGGGATACAGCTGACTTCTCCAGCCATGGCAACTGCCATGCCAAACATTGCTCCTGGTCTCATCTTTATCATTGCCTGGTGTTTTAGATTAGAGAGAGTCAAACTTAGTTGTCTGTACAGCAAAGTTAAGATTTTAGGGACATTGCTTTGTGTAGTGGGCGCCATCATAATGAGCATACTGCACAGCACCATCACGATACCGGCAAAAGAGCAGCTAATTTTTCTTCCTTCATCTGTACTCTTCAATAAGGAAAAGTTTATTGGTTGTTTGTATCTCATGATGGCGGTCTTCGTATTATCAAGCAATGTGGTATTGCAGGCTACAGCCCTTGGTGAATTACCCGCTCCAATGTCGTTGAGTGCTGTAACTTCGTTCATTGGAGTATTAACGACTGCAGTTGTACAACTACTGAAGAATCATAAGTTAGAAACCGAATGGTCAACTGTCAACATGAAGGATTTACTCTGCTACTCTCTATTGGGAGGAATAGTGAGCGGTATAAGCTTGAGCTTCAACGGGTGGGCAATGAAGAAAAGAGGGCCAGTTTTGGTGTCAATTTTCAGTCCTATTGGAACAGTTTTCTCTGTCATTCTCTCTGTCTTCACCTTAGGAGACACTATTTCCATTGGAAGCCTTTCTGGTATGTTCTTGATGTTCTGTGGGCTCTACTTTGTGCTTTGGGCAAAAGGAAAAGAAGGTTACTGTGATGGGAGTGGCTATCAAAGTGATGACTTTGATATTGAGAAACCTTTACTCTCTTGA 1047 42.02 MKIGAMEDVAIIGGLISVQFIYAGNSVLLSYLMSLGLNPLNIVIYIASATFLFLAPLAVCFERSNWPKKLSFKLVLQLVLISFGGVTLFQTLLLEGIQLTSPAMATAMPNIAPGLIFIIAWCFRLERVKLSCLYSKVKILGTLLCVVGAIIMSILHSTITIPAKEQLIFLPSSVLFNKEKFIGCLYLMMAVFVLSSNVVLQATALGELPAPMSLSAVTSFIGVLTTAVVQLLKNHKLETEWSTVNMKDLLCYSLLGGIVSGISLSFNGWAMKKRGPVLVSIFSPIGTVFSVILSVFTLGDTISIGSLSGMFLMFCGLYFVLWAKGKEGYCDGSGYQSDDFDIEKPLLS 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9125483 9128463 + CmoCh02G015810.1 Cmo02g01581 377178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01581 348 PANTHER WAT1-RELATED PROTEIN 10 348 IPR030184 GO:0016021|GO:0022857
Cmo02g01581 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 154 - -
Cmo02g01581 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 325 - -
Cmo02g01581 348 Pfam EamA-like transporter family 182 321 IPR000620 GO:0016020|GO:0016021
Cmo02g01581 348 Pfam EamA-like transporter family 16 153 IPR000620 GO:0016020|GO:0016021
Cmo02g01581 348 PANTHER OS11G0588100 PROTEIN 10 348 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01581 Cmo-Chr2:9125483 Cmo04g02746 Cmo-Chr4:19879893 9.07E-48 dispersed
Cmo15g01177 Cmo-Chr15:8195716 Cmo02g01581 Cmo-Chr2:9125483 1.08E-21 wgd
Cmo02g01581 Cmo-Chr2:9125483 Cmo06g00808 Cmo-Chr6:4358736 1.54E-111 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01581 - - csv:101204100 532.717