Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01584 ATGGAATTCTTCATCACTTCATTTTTGTTCTTCATTTCCATTTCCACTTTCTTTCTTCTATCAACAACCCAACCAATTTCTTCACCATCTGCCCCCGCCGCCGCCCCACACCGCCGCCACAAGTGGGTCGGACCCACTGGCCATCGGCTGATCAAAGTAGACGGTAACGGCTCCGGCGACTTCCTCACTGTCCAAGCCGCCGTCAATGCAGTCCCGGATTATAACACCGTGAGCACCGTTATCCGAATCAGCCCCGGATGTTACGTGGAGAAGGTGGTGGTGGCGGCGACGAAGCCGTACATAACATTTGAAGGAGGAGGGAAAGAGAGGACGGTGATAGAATGGCACGACAGGGCAGATGACCGAGATCCCAGCGGGCAGCAGCTGCGTACCTACAGAACAGCCTCGGTCACAGTTTTCGCTAATTACTTCTCTGCCCGAAACATCAGCTTCAGGAATACAGCACCGGCGCCGATGCCCGGAATGCAAGGGTGGCAAGCGGCGGCGTTCCGTATATCCGGCGATAAAGCCTATTTTTCCGGGTGCGGGTTCTACGGTGCTCAAGATACGTTGTGTGATGACGCCGGCCGCCATTACTTCAAAGAATGCTACATTGAAGGCTCCATAGACTTTATCTTTGGAAATGGGCGTTCCATGTATAAGGATTGTGAGCTGCACTCCATCGCCACTCGGTTCGGTTCTATAGCGGCACAAGATAGAAACTTGCCGGACGAGAAGACCGGGTTTGCTTTCGTCCGGTGCAAGGTTACCGGTTCAGGACCCGTGTACGTGGGCCGGGCCATGGGCCAGTACTCTAGAATCGTCTACGCGTATACATACTTTGATGACGTGGTGGCCCACGGTGGATGGGATGACTGGGACCACGTCAGCAACAAAAACAAGACGGTATTTTTTGGAGCATACAAATGCTGGGGCCCAGGAGCAAGCAAAGTGAAGGGAGTATCATGGGCCAGGGAGTTGGAGTTTGAAGAGGCCCATCCATTTCTTGTCAAGAGCTTTGTGAATGGTAGGCACTGGATTGCACCCTCCGATGCTTAG 1059 53.35 MEFFITSFLFFISISTFFLLSTTQPISSPSAPAAAPHRRHKWVGPTGHRLIKVDGNGSGDFLTVQAAVNAVPDYNTVSTVIRISPGCYVEKVVVAATKPYITFEGGGKERTVIEWHDRADDRDPSGQQLRTYRTASVTVFANYFSARNISFRNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRNLPDEKTGFAFVRCKVTGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGAYKCWGPGASKVKGVSWARELEFEEAHPFLVKSFVNGRHWIAPSDA 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9136644 9138587 - CmoCh02G015840.1 Cmo02g01584 377181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01584 352 ProSitePatterns Pectinesterase signature 2. 205 214 IPR033131 -
Cmo02g01584 352 PANTHER PECTINESTERASE 68-RELATED 22 351 - -
Cmo02g01584 352 SUPERFAMILY Pectin lyase-like 48 349 IPR011050 -
Cmo02g01584 352 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 22 351 - -
Cmo02g01584 352 Pfam Pectinesterase 53 343 IPR000070 GO:0030599|GO:0042545
Cmo02g01584 352 Gene3D - 48 351 IPR012334 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01584 Cmo-Chr2:9136644 Cmo11g00665 Cmo-Chr11:3199173 1.68E-105 dispersed
Cmo15g01182 Cmo-Chr15:8211215 Cmo02g01584 Cmo-Chr2:9136644 7.04E-28 transposed
Cmo15g01181 Cmo-Chr15:8208820 Cmo02g01584 Cmo-Chr2:9136644 2.18E-180 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01584 - - cmo:103483059 614.379