Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01651 ATGGCTGGTTTGGATTTAGGCAATCGCTATATTCACCAACTTCAAAGACATGATTTCAACCTTCATCACCCGCACCACCACCCTGATTCTCAATCTCACCATGAAGACGAATCAGATCAGCCGTTGGATTTTGTCTCCGCCGCCCCCGCCGCCACTGACATGGTGGTCTCTCGCCGTCCCCGTGGCCGTCCAGCTGGCTCCAAAAACAAACCCAAGCCCCCGGTTATCATTACCCGGGAAAGCGCCAATACCCTAAGGGCTCATATTTTTGAAGTTGGAAGCGGCTGCGATGTCTTTGATAGCATCGCTATCTACGCCCGCCGCCGCCAGCGGGGGATATGCATCTTGAACGCCAACGGAATGGTAACTAATCTCAACTTACGCCAACCGACCGGGACCGGCGCTGTCTTAAACCTACAAGGGAGGTTCGAGATATTATCGCTTACCGGATCTTTCCTCCCGCCGCCTGCTCCTCCCGGCGCTACTAGTTTGACTATATATTTAGCGGGTGGTGAAGGGCAAGTCGTCGGTGGGAATGTTGTCGGAGAGTTGGTGGCAGCCGGGCCAGTAACCGTCATCGTCGCATCGTTCGCGAATGTAGCATACGAGAGACTCCCACTTGAGGACCAAGAACAAGAACAAGAACAAGAACAAGATCAGATGCAACCACCAACATCACAGGGCGGTGGAGGCAGCGGCCCGTTTCCAGATCCGTCTTCAGGGCTTCCTTTCTTCAATTTGCCTCTAAATATGCAGAACCAAATTCAGCTACCATTCTAA 780 52.82 MAGLDLGNRYIHQLQRHDFNLHHPHHHPDSQSHHEDESDQPLDFVSAAPAATDMVVSRRPRGRPAGSKNKPKPPVIITRESANTLRAHIFEVGSGCDVFDSIAIYARRRQRGICILNANGMVTNLNLRQPTGTGAVLNLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGEGQVVGGNVVGELVAAGPVTVIVASFANVAYERLPLEDQEQEQEQEQDQMQPPTSQGGGGSGPFPDPSSGLPFFNLPLNMQNQIQLPF 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9524324 9525103 + CmoCh02G016510.1 Cmo02g01651 377248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01651 259 ProSiteProfiles PPC domain profile profile. 82 218 IPR005175 -
Cmo02g01651 259 MobiDBLite consensus disorder prediction 217 233 - -
Cmo02g01651 259 MobiDBLite consensus disorder prediction 209 246 - -
Cmo02g01651 259 MobiDBLite consensus disorder prediction 20 41 - -
Cmo02g01651 259 SUPERFAMILY AF0104/ALDC/Ptd012-like 82 211 - -
Cmo02g01651 259 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 258 IPR014476 GO:0003680
Cmo02g01651 259 MobiDBLite consensus disorder prediction 20 75 - -
Cmo02g01651 259 Pfam Plants and Prokaryotes Conserved (PCC) domain 86 198 IPR005175 -
Cmo02g01651 259 CDD DUF296 86 169 IPR005175 -
Cmo02g01651 259 Gene3D - 85 218 - -
Cmo02g01651 259 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 258 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01651 Cmo-Chr2:9524324 Cmo17g00057 Cmo-Chr17:290693 1.43E-84 dispersed
Cmo14g02016 Cmo-Chr14:14758803 Cmo02g01651 Cmo-Chr2:9524324 1.71E-92 wgd
Cmo16g01202 Cmo-Chr16:8602724 Cmo02g01651 Cmo-Chr2:9524324 1.78E-92 wgd
Cmo19g00257 Cmo-Chr19:1873601 Cmo02g01651 Cmo-Chr2:9524324 2.20E-117 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01651 - - cmo:103503535 360.918