Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01705 ATGTTTGATTTCATCATTTTCTTCTTCTTTATTCTCCTGGCTCCTTGTAAATCTTCTGAAATTTCTGCAGCTGCTCGGAGATTGCTTCACCAGCCCTTTTTCCCGTATGATTCTGTGCCTCCGGCGGAGCTACCGTCGCTTCCGGTACCCCCACCGCCGGATCCCAAATACCCATTTTCCACTACCCCTCCTGCAACTCCGGATGGCTCTCCATTCTTTCCGACGTATCCAGGAACTCCTCCTCCGCCTACGCCTGCGAGCATTGCAACGTTTCCGGCGAATATTTCTTCTCTGATTCTCCCTCGTTCGTCTCCGTCTGGTTCCAGTTCTAAGAAGGTTGTTCCATTGGTTGTTGCTGCGGTTGTTTCTGTTGTTTTGGTTGTTTGCATTGCTGGGTTTTTGTACTGGCGGCGGCGTAGCCGCCGTGGGTTGGCTGAGGATAAGACGTTCAGATCCGAAAGTAGTAGCCGGTTGTGTCCGGTTCCGAGTGTTGAAGTCGGTAATGGAATTCCTAAGTTGAGACATCCTTCTGCTTCTAGCTCTGAGTTTCTGTATTTGGGTACTCTTGTGAACTCGAGAGGAATCAACGATCGTTCCGTTGGGGGAGGTCGTGTGGCTGATCCTAGGCCGTTGGATTCGCCGGAGCTTCATCCGCTTCCGCCGCTGAACTTCGGTCGGTCGAATGAGAAGCAAAGCGGTGGAAATGGAGATGAGAGATCGATGGGAGATGAAGAGGAGGAGGAATTTTATTCTCCTAAAGGTTCTCTCGGCGCGATTGGCTCGGGATCTCGAAGAGTGCTCGCAACAATGGCGGCTGAAGATTTGCTTGGCAAAACCAGCGATTCGAGCTCCACTTCGTATTCCACATCCAGCGGTTCGGTTTCGCCGGCGAGATCACGTTCTAAGAGTCTTTCTCTATCTCCACCGGCGAGTTTGAGCCCTAGAAGATCTGTTCAAAATGACTCTTCTCATTTCTCTGTTTCTGCTACTGTAGCGACGGAGCAGCTTTCGCCACCATTGACGCCGCCTCTTTCCCACGGCGGAGGGGAATCGGACGATGGCGGCAAATCTCACTGCCCTTCTCCATTGCGTTTATCGACGGAGAAAGCTCCGGAGAAGAGCTCCACCGCATCTTCCTCCCGGAGATTTTCTAATGCTTCAGTTCACAGTGCGACGTTACCAATTTCAGCAACCAACAAGGATTTGGATAATCATGATGAAACGAACAATAATCACGAAGAACAATCTCCAAGACAATCACATAGTTCAGATCCTGATCAGTTTCCATCTTCTCCTTGTTTATCTCCACTTTCCGATGGAATTTTGGGGAGAATTCAAATTCAATCGCCGACAGTTTCAAACGTTCGCGACTCGGATTCTGATGCGAAATTTAAGCAACTTCCTTACTCATTTACTTCATCTTCACCTTCATCATCACCGGAGCGAGTAGTTCTGGACTCATCTCCATCAAGAACATCCATTATTTCCGATCAAAACAGGTCGTCACCGTCACCACCATCACCGGAGAGAATTCTGATGAGTGATTCAGATTCATCAAGGAGAACTTTCGACCACTTCGATCAAGATCTTCAATCTTCTTCTGCAGACATCAATTCTACTGATGTGGATCGACTGCAATCTCCTTCGGGCATCCCTGCCGCTCCTCCGCCACCGCCACCGCCGCCACCACCACTTGCAGCACCTCCTCCACCTATACGTTGTGAAATGCCCATTTCACCTTCAACACCAGTAGGCCAATCCATTCCAATGGCGCCTCCTCCATTAGTGCCTCCATTAAGGCCATTTATAATAGAGACTGTGAAAAATGTCTCACCAGTTCAGCTGCCTTCCTGCAATGGTGAATCATCTGAAGACACTCCGAAGCCCAAGTTGAAGCCATTGCATTGGGACAAAGTGAGGGCGAGCTCCGATCGCGAGATGGTGTGGGATCAGCTCAGATCAAGCTCTTTTAAAGTGAACGAGGAAATGATCGAAACTCTGTTTGTTGTGAACACTTCCAACTCGAAGGAAACAACTCCACGCCCCGTGCTTCCTACACCTAACCAAGAGATCGGAGTTCTCGATCCCAAAAAGTCACAGAACATCGCCATTGCGCTACGGGCACTTAACGTGACCATAGAAGAAGTTTGTGAAGCTCTTTTAGAAGGTAATGCTGATGCACTTGGATTGGACCTACTTGAGAGTTTATTGAAGATGGCTCCAACAAAAGAAGAAGAACGTAAGCTAAAGGCATCCAAGGATGTCTCACCTACCAAGCTTGGCCCTGCTGAGAAATTTTTGAAGGCAGTTCTTGATGTTCCTTTTGCGTTTAAAAGGGTGGATGCGATGCTTTACATGGCAAACTTCGAGTCCGAGATCGAGTACTTAAAGAAGTCGTTTGAAAATCTCGAGACTGCCTGCGAGGAATTGAGGAATAGCAGGATGTTCTTGAAACTCTTGGAAGCTGTGCTCAAAACGGGGAATCGCATGAACGTTGGCACGAATCGTGGGGAGGCACAAGCCTTCAAACTCGACACACTTCTAAAGCTCGTCGATGTCAAGGGTGCAGATGGAAGAACCACTCTCCTACATTTTGTTGTACAAGAAATCATCAGAAGTGAAGGAGCTCGTCTTTGTAGCACGAGTCAACCTCCAAACTCCAACCTGAGCGACGATGTAAAATGCAGGAAAATCGGCCTGCAAGTTGTTTCAGGTCTCAGCTCGGAGCTCGCCAATGTGAAGAAAGCAGCGTCAATGGATTCCGATGTGCTCAGCGGGGAGGTCATCAAGCTTTCTAGAGGACTCGACAACATCAGGGAGGCTATATGTTTAAACGAAGCAGCAGGGACAAATCAAAGCACGGAAAAGTTCTCCGAGTCGATGAATAGATTCTTGAACATGGCAGAAGTGGAAATCATCAGAATTCAAGCTCATGAAAGCGTTGCATTATCTCTAGTAAAGGAGATCACAGAGTACTTCCATGGCAACTCTGCCAAAGAAGAAGCTCATCCATTTAGAATCTTCATGGTGGTGAGAGATTTCCTAACGATCCTGGACGGAGTCTGCAAGGAAGTCGGGATGGTAAACGAGCGAACGATCGTGAGTTCGGCACATAAATTTCCAGTTCCAGTGAATCCAACAATACCACAAGCATTTCAAGCTCATCAAAAAGTGCAGAAATACAGTTCATCTGATGAAGAAAGTGGATAA 3210 47.94 MFDFIIFFFFILLAPCKSSEISAAARRLLHQPFFPYDSVPPAELPSLPVPPPPDPKYPFSTTPPATPDGSPFFPTYPGTPPPPTPASIATFPANISSLILPRSSPSGSSSKKVVPLVVAAVVSVVLVVCIAGFLYWRRRSRRGLAEDKTFRSESSSRLCPVPSVEVGNGIPKLRHPSASSSEFLYLGTLVNSRGINDRSVGGGRVADPRPLDSPELHPLPPLNFGRSNEKQSGGNGDERSMGDEEEEEFYSPKGSLGAIGSGSRRVLATMAAEDLLGKTSDSSSTSYSTSSGSVSPARSRSKSLSLSPPASLSPRRSVQNDSSHFSVSATVATEQLSPPLTPPLSHGGGESDDGGKSHCPSPLRLSTEKAPEKSSTASSSRRFSNASVHSATLPISATNKDLDNHDETNNNHEEQSPRQSHSSDPDQFPSSPCLSPLSDGILGRIQIQSPTVSNVRDSDSDAKFKQLPYSFTSSSPSSSPERVVLDSSPSRTSIISDQNRSSPSPPSPERILMSDSDSSRRTFDHFDQDLQSSSADINSTDVDRLQSPSGIPAAPPPPPPPPPPLAAPPPPIRCEMPISPSTPVGQSIPMAPPPLVPPLRPFIIETVKNVSPVQLPSCNGESSEDTPKPKLKPLHWDKVRASSDREMVWDQLRSSSFKVNEEMIETLFVVNTSNSKETTPRPVLPTPNQEIGVLDPKKSQNIAIALRALNVTIEEVCEALLEGNADALGLDLLESLLKMAPTKEEERKLKASKDVSPTKLGPAEKFLKAVLDVPFAFKRVDAMLYMANFESEIEYLKKSFENLETACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGEAQAFKLDTLLKLVDVKGADGRTTLLHFVVQEIIRSEGARLCSTSQPPNSNLSDDVKCRKIGLQVVSGLSSELANVKKAASMDSDVLSGEVIKLSRGLDNIREAICLNEAAGTNQSTEKFSESMNRFLNMAEVEIIRIQAHESVALSLVKEITEYFHGNSAKEEAHPFRIFMVVRDFLTILDGVCKEVGMVNERTIVSSAHKFPVPVNPTIPQAFQAHQKVQKYSSSDEESG 1069
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9770535 9774723 + CmoCh02G017050.1 Cmo02g01705 377302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01705 1069 MobiDBLite consensus disorder prediction 467 513 - -
Cmo02g01705 1069 Pfam Formin Homology 2 Domain 623 1018 IPR015425 -
Cmo02g01705 1069 PANTHER FORMIN-RELATED 5 1068 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cmo02g01705 1069 Coils Coil 395 415 - -
Cmo02g01705 1069 MobiDBLite consensus disorder prediction 277 340 - -
Cmo02g01705 1069 ProSiteProfiles Formin homology-2 (FH2) domain profile. 621 1044 IPR015425 -
Cmo02g01705 1069 MobiDBLite consensus disorder prediction 550 577 - -
Cmo02g01705 1069 MobiDBLite consensus disorder prediction 400 420 - -
Cmo02g01705 1069 MobiDBLite consensus disorder prediction 528 546 - -
Cmo02g01705 1069 SMART it6_source 621 1033 IPR015425 -
Cmo02g01705 1069 MobiDBLite consensus disorder prediction 368 399 - -
Cmo02g01705 1069 MobiDBLite consensus disorder prediction 197 261 - -
Cmo02g01705 1069 Coils Coil 786 813 - -
Cmo02g01705 1069 MobiDBLite consensus disorder prediction 277 442 - -
Cmo02g01705 1069 Gene3D Formin, FH2 domain 620 1028 IPR042201 -
Cmo02g01705 1069 SUPERFAMILY Formin homology 2 domain (FH2 domain) 555 1027 - -
Cmo02g01705 1069 PANTHER FORMIN-LIKE PROTEIN 1 5 1068 - -
Cmo02g01705 1069 MobiDBLite consensus disorder prediction 467 589 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01705 Cmo-Chr2:9770535 Cmo11g01174 Cmo-Chr11:6781255 5.09E-120 dispersed
Cmo02g00543 Cmo-Chr2:3081604 Cmo02g01705 Cmo-Chr2:9770535 1.39E-164 transposed
Cmo04g01984 Cmo-Chr4:10269132 Cmo02g01705 Cmo-Chr2:9770535 9.27E-22 transposed
Cmo19g00201 Cmo-Chr19:1313077 Cmo02g01705 Cmo-Chr2:9770535 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01705 - - bhj:120077761 1497.26