Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01726 ATGCGTTTTAGAACCGTGAGATTGACAGCCATACATAACGGGCTAAAACGGATAATATCTACTAGCGATAGGATTGGATTGGAAAGTGGGAGTAAAATAGTTTTGAATTGTGGAGCCCTTTTGGTGCAAGAGGAAAACAGGAAAGAATTGTCTGCCACTGCCAGATTACACAAACTTCTCTTATCTCTATCTCTATCTCTCTCCCTCTTCCAAGCTGCGACGATGGTTGGTAGCACCGTGTTCACTTTGGCTGAGGTTGCCTCCCACGACAACCGCAACGACTGCTGGTTGATCATTGAGGACAAGGTGTACGATGTAACAAAGTTCCTTGAAGACCATCCTGGTGGTGATGAAGTCTTGTTGTCAGCCATTGGTAAGGATGCAACCAACGATTTTTTCGATGTCGGGCACAGTAGCGCTGCTCGAGCGATGATGGAAGAATTTTACATCGGTGACATCGATAGCTCAACTATCCCTACAAAAAGGAAGTACACTCCTCCAAAGCAGCCCCTATACAACCAAGACAAGACACCAGAGTTCATTATCAAGGTCCTCCAGTTTCTAGCTCCCCTGGTAATTTTGGCATTGGCTTTTGGCGTCCATCTCTATACCAAAACAACATGA 624 45.35 MRFRTVRLTAIHNGLKRIISTSDRIGLESGSKIVLNCGALLVQEENRKELSATARLHKLLLSLSLSLSLFQAATMVGSTVFTLAEVASHDNRNDCWLIIEDKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFFDVGHSSAARAMMEEFYIGDIDSSTIPTKRKYTPPKQPLYNQDKTPEFIIKVLQFLAPLVILALAFGVHLYTKTT 207
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9856432 9858635 + CmoCh02G017260.1 Cmo02g01726 377323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01726 207 PANTHER - 78 205 - -
Cmo02g01726 207 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 78 154 IPR001199 -
Cmo02g01726 207 Gene3D - 77 157 IPR036400 -
Cmo02g01726 207 PANTHER CYTOCHROME B5 78 205 - -
Cmo02g01726 207 Pfam Cytochrome b5-like Heme/Steroid binding domain 82 153 IPR001199 -
Cmo02g01726 207 PRINTS Cytochrome B5 signature 103 113 IPR001199 -
Cmo02g01726 207 PRINTS Cytochrome B5 signature 113 127 IPR001199 -
Cmo02g01726 207 PRINTS Cytochrome B5 signature 141 153 IPR001199 -
Cmo02g01726 207 PRINTS Cytochrome B5 signature 128 135 IPR001199 -
Cmo02g01726 207 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 109 116 IPR018506 GO:0020037
Cmo02g01726 207 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 79 164 IPR036400 -
Cmo02g01726 207 SMART Cyt_b5_2 81 154 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01726 Cmo-Chr2:9856432 Cmo15g01073 Cmo-Chr15:6968038 4.98E-56 dispersed
Cmo12g01305 Cmo-Chr12:11457202 Cmo02g01726 Cmo-Chr2:9856432 6.06E-21 transposed
Cmo14g01941 Cmo-Chr14:14367871 Cmo02g01726 Cmo-Chr2:9856432 2.21E-66 wgd
Cmo17g00112 Cmo-Chr17:595825 Cmo02g01726 Cmo-Chr2:9856432 9.27E-62 wgd
Cmo19g00182 Cmo-Chr19:1180756 Cmo02g01726 Cmo-Chr2:9856432 1.56E-64 wgd
Cmo02g01726 Cmo-Chr2:9856432 Cmo06g01256 Cmo-Chr6:9487661 3.13E-66 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01726 K23490 - csv:101212882 253.447