Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo02g01752 ATGCCTTTCTCGATTACGCACCTTCTTCTGGTTCTTCATGCGGCCAATTTGGTTTTTTCTTGCTCAGGACAATCTACACCACACATATACTTATCTCCTTCCTTAGAGCCCAACCTGGAAACAACAATGGCAGAAATGTCAACAGAGCATGTAAGTTCGGAGCCGATGGGTTTTTCATTTGTGCCCTCAAAATTACATGGTAACTGGATGTCTAAGTCATCTTCGGGACCAACGACTGCTCCTGCACCTTCTCCAGGTCCTATAGTTGCACCTTTACCTATCCGACATCATCGATGGCGTCGTAAACAACCTCATGTGGTTGCTCCTACCCCGTCAAAAGACCAAGGTTGTGATCAAATATGCATGGAACCTCTTACTGCGGCACCCTTTGGTTCACCTTGCGGCTGTGTATTTCCCATGAAAGTCAGACTTCTTCTGGATATAGCTCCATATGCTGTTTTTCCTGTGATGAACGAGCTTGAAATTGAGATTGCAGAGGGGACTTACTTGGAGCAAAGCCAAGTGAAAATCATGGGTGCCAATGCAGATAGTCAAAATCAGGGAAAAACTGTGGTGGAGATAAATTTAGTGCCTCTGGGAGAGAAATTTGATAATACCACTGCAGTACTGACTTACAGAAGATTTTGCGATAAAAAAGTGCATCTAAATATGACGCTTTTTGGTGATTATGAAGTTGTCTACATCAGCTATCCAGGGATTCCTTCTTCACCGCCATATGGAGGTTACATGGGAAGTGCTCCTAGTGGAAGTGCTGGAGATCTTCCCATTACTGCAAATTTCGTTAATAAGAGCCAGAAGATGAATGTTAAAATAATTGCCGTCATAGCACTTTCAGCATTTGTTGTGTTATTGGTGTTCATTGGAGCTCTTTCCATCTTTTTTAAATGGAGAAAGGTTGGCAGACCGTCTAGTGCTGTTGGCCCTGTCTTCACGTCATCAATTAACAAAAGATCTGGTCTAGGATCAGCCTTATCGAGTAGCATTGCAAGCTCCACATCTGTTTCCCTAATGTCCGCGATGCCAACCAGTATTCAATCTGTCAAAACATTTGCACTTTCTGAACTTGAGAAAGCAACAGATAAATTTAGTTCAAGAAGGATTTTAGGCGAAGGGGGATTTGGCCGGGTTTACTTTGGTCTTCTGGAAGATGGAAACGAAGTTGCAGTTAAGTTGCTTACACGGGATAATCAGAATGGAGACCGTGAATTTATTGCGGAAGTTGAGATGTTGAGTAGACTGCACCATCGGAATCTTGTGAAACTGATTGGGATATGCATTGACGGGCGAACTCGCTGCTTAGTTTATGAGCTTGTCCATAATGGAAGTGTTGAGTCCCACTTGCACGGTATATTTCCTATATCACCTACGAGTAGGCCTTTTGGGCGTTTGTTAACCTTTCTTCTATGTACTGCTGATAGATGTCTCCGTCTCCTATACATGGCTCTTCACCTGCACTGTGTAGGCATTGACAAGAGAAAGGGACCCCTTGACTGGGATGCGCGGTTAAAGATTGCTCTTGGAGCAGCAAGAGGTTTGGCATATCTTCACGAAGATTCTAACCCCCGTGTAATTCACCGCGATTTCAAGGCAAGTAATGTTTTGTTGGAAGTTGACTTCACCCCCAAGGTTTCGGATTTTGGATTGGCTAGGGAGGCAACTGAAGGAAGTGAACATATCTCAACACGGGTGATGGGAACTTTTGGGTATGTTGCCCCTGAATATGCAATGACAGGGCACCTACTCGTCAAGAGTGATGTTTACAGCTATGGAGTCGTGCTACTTGAGCTTCTTTCGGGAAGAAAACCAGTGGACATGTCCCAGCCACACGGTGAGGAGAACCTTGTAACATGGGCTAGGCCTCTACTAACCAGTAGAGAAGGTTTGGAGCAACTAGTAGATCTTTCTCTAGCTGGTAGTTATGACTTTGATGACATGGCCAAGGTGGCTGCCATTGCTTCCATGTGCGTTCATCCAGAGGTGACCCAGAGGCCATTCATGGGAGAAGTTGTGCAGGCTCTGAAGCTGATATACAACGACACAGATGAGACGTGTGCAGACTACTGCAGCCAAAAGGAGTCCTCAGCTCAGGAATCGGATTTCAAAGGCGATCTCGTACCATCAGATAGCAGTTGGTGGAATGCTGGTGGTCTCACACCTCGACTGACATACGGTCAAGCTTCTTCCTTCATCACCATGGAATACAGCTCTGGCCCCCTTGAAGATATGGAAAACCGACTGTTTTCAACTTCAAGTTTGGTGGGCGACGAGATATCCTTGCCCATTCGGCATGGAAACAGGTCAGGTCCCTTACGAACTGCTCGAAGCAAGCCTGCCTTTTATAGATTGTCGGGAAGTAGGAGCGAGCATGGAGGATTTCTTTCAAGGCCTTCTTGGAACAACAATTGGTTTTGGGTTTGA 2439 45.39 MPFSITHLLLVLHAANLVFSCSGQSTPHIYLSPSLEPNLETTMAEMSTEHVSSEPMGFSFVPSKLHGNWMSKSSSGPTTAPAPSPGPIVAPLPIRHHRWRRKQPHVVAPTPSKDQGCDQICMEPLTAAPFGSPCGCVFPMKVRLLLDIAPYAVFPVMNELEIEIAEGTYLEQSQVKIMGANADSQNQGKTVVEINLVPLGEKFDNTTAVLTYRRFCDKKVHLNMTLFGDYEVVYISYPGIPSSPPYGGYMGSAPSGSAGDLPITANFVNKSQKMNVKIIAVIALSAFVVLLVFIGALSIFFKWRKVGRPSSAVGPVFTSSINKRSGLGSALSSSIASSTSVSLMSAMPTSIQSVKTFALSELEKATDKFSSRRILGEGGFGRVYFGLLEDGNEVAVKLLTRDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIDGRTRCLVYELVHNGSVESHLHGIFPISPTSRPFGRLLTFLLCTADRCLRLLYMALHLHCVGIDKRKGPLDWDARLKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEVDFTPKVSDFGLAREATEGSEHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMSQPHGEENLVTWARPLLTSREGLEQLVDLSLAGSYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCADYCSQKESSAQESDFKGDLVPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLEDMENRLFSTSSLVGDEISLPIRHGNRSGPLRTARSKPAFYRLSGSRSEHGGFLSRPSWNNNWFWV 812
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10027464 10032598 - CmoCh02G017520.1 Cmo02g01752 377349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo02g01752 812 ProSitePatterns Protein kinases ATP-binding region signature. 375 397 IPR017441 GO:0005524
Cmo02g01752 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 530 542 IPR008271 GO:0004672|GO:0006468
Cmo02g01752 812 CDD STKc_IRAK 375 683 - -
Cmo02g01752 812 Gene3D Phosphorylase Kinase; domain 1 340 444 - -
Cmo02g01752 812 SUPERFAMILY Protein kinase-like (PK-like) 352 684 IPR011009 -
Cmo02g01752 812 ProSiteProfiles Protein kinase domain profile. 369 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo02g01752 812 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 490 808 - -
Cmo02g01752 812 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 42 456 - -
Cmo02g01752 812 PANTHER OS01G0750732 PROTEIN 490 808 - -
Cmo02g01752 812 PANTHER OS01G0750732 PROTEIN 42 456 - -
Cmo02g01752 812 Gene3D Transferase(Phosphotransferase) domain 1 488 707 - -
Cmo02g01752 812 Pfam Protein tyrosine and serine/threonine kinase 372 679 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g01752 Cmo19g00148 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01752 Cmo-Chr2:10027464 Cmo10g00745 Cmo-Chr10:3433113 0 dispersed
Cmo19g00148 Cmo-Chr19:815151 Cmo02g01752 Cmo-Chr2:10027464 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74150 PF07714 PK_Tyr_Ser-Thr 3.60E-44 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo02g01752 - - csv:101203278 1324.69