Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo03g00016 | ATGTCGTTGTTGATGTCAATGTCGATGTCGATGAACTTAGTTAGTATTATCGTGTTGGTGAGCGTTAGTGTAACATTTAGAGGCGTGAATGGATTGAGTATGGGATATTACTTGATGAGCTGCCCGTTTGTGGATCCGATTGTGAAGAACACGGTGAATCGAGCTCTTCAAAATGATCCCACTTTGGCTGCATCTCTCATACGAATGCATTTTCATGATTGTTTCGTTGAGGGATGCGATGGATCAGTGTTGATTGATTCAACACGAGACAACAGAGCAGAAAAGGATTCTCCCGCCAATGAAAGCTTACGAGGTTACGAGGTTATTGATGACATTAAGGAACAATTAGAAAACCAATGTCCTGGTGTTGTTTCTTGCGCCGACATTGTCGCCATGGCTGCCAGAGATGCAGTCTTTTGGGCGGGAGGTCCATTTTATGACATACCGAAGGGAAGGAAGGACGGAACGAGATCTAGAATCGAAGACACCGCCAATTTGCCTTCGCCTTTCTTCAATGCATCTCAGCTTATTAATACCTTCGCCCGCCGTGGCTTTACAGCTCAGCAAATGGTCGCACTTTCGGGGGCGCATACATTAGGAGTGGCACGATGCGTATCATTCAAAGACAGACTGGACGGCACCGACACTCTTCTGAGTCCCAACTTTGGGAGAACACTGTCAAGAACATGCAGCAATGGCGACAATGCAATACAAACATTCGACGCCACGGCTGACAGCTTCGACAACGTCTATTACAACGCGCTGTCGAGAGGAGCCGGGGTTTTGTTTTCGGACCAGACGTTGTTCGCTAGCCCGCGTACGAGGGGCATTGTCAATGCCTACGCCATGAACCAAGCCCTGTTCTTCTTGGACTTCCAACAGGCCATCATCAAAATGGGTATGCTTGATGTAAAGGAAGGTCGTTGGGGCCAAGTCCGCCGCAACTGCCGTAGGGTTAATTGA | 963 | 48.08 | MSLLMSMSMSMNLVSIIVLVSVSVTFRGVNGLSMGYYLMSCPFVDPIVKNTVNRALQNDPTLAASLIRMHFHDCFVEGCDGSVLIDSTRDNRAEKDSPANESLRGYEVIDDIKEQLENQCPGVVSCADIVAMAARDAVFWAGGPFYDIPKGRKDGTRSRIEDTANLPSPFFNASQLINTFARRGFTAQQMVALSGAHTLGVARCVSFKDRLDGTDTLLSPNFGRTLSRTCSNGDNAIQTFDATADSFDNVYYNALSRGAGVLFSDQTLFASPRTRGIVNAYAMNQALFFLDFQQAIIKMGMLDVKEGRWGQVRRNCRRVN | 320 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 195965 | 197627 | - | CmoCh03G000160.1 | Cmo03g00016 | 377479 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo03g00016 | 320 | PRINTS | Haem peroxidase superfamily signature | 63 | 77 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00016 | 320 | PRINTS | Haem peroxidase superfamily signature | 124 | 141 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00016 | 320 | PRINTS | Haem peroxidase superfamily signature | 142 | 154 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00016 | 320 | PRINTS | Haem peroxidase superfamily signature | 189 | 204 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00016 | 320 | PRINTS | Haem peroxidase superfamily signature | 240 | 255 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00016 | 320 | PANTHER | PEROXIDASE 25-RELATED | 19 | 318 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00016 | 320 | Pfam | Peroxidase | 48 | 283 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00016 | 320 | Gene3D | Peroxidase, domain 2 | 167 | 299 | - | - | |
Cmo03g00016 | 320 | SUPERFAMILY | Heme-dependent peroxidases | 31 | 320 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00016 | 320 | ProSitePatterns | Peroxidases active site signature. | 63 | 74 | IPR019794 | GO:0004601 | |
Cmo03g00016 | 320 | Gene3D | - | 35 | 320 | - | - | |
Cmo03g00016 | 320 | PRINTS | Plant peroxidase signature | 41 | 60 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00016 | 320 | PRINTS | Plant peroxidase signature | 65 | 85 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00016 | 320 | PRINTS | Plant peroxidase signature | 104 | 117 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00016 | 320 | PRINTS | Plant peroxidase signature | 123 | 133 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00016 | 320 | PRINTS | Plant peroxidase signature | 142 | 157 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00016 | 320 | PRINTS | Plant peroxidase signature | 188 | 200 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00016 | 320 | PRINTS | Plant peroxidase signature | 238 | 253 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00016 | 320 | PRINTS | Plant peroxidase signature | 254 | 271 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00016 | 320 | PRINTS | Plant peroxidase signature | 294 | 307 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00016 | 320 | PANTHER | PEROXIDASE 47 | 19 | 318 | - | - | |
Cmo03g00016 | 320 | ProSiteProfiles | Plant heme peroxidase family profile. | 31 | 320 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00016 | 320 | CDD | secretory_peroxidase | 31 | 319 | IPR033905 | GO:0004601|GO:0042744 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo03g00016 | Cmo-Chr3:195965 | Cmo18g01236 | Cmo-Chr18:12206483 | 9.77E-96 | dispersed | |
Cmo03g00016 | Cmo-Chr3:195965 | Cmo07g00403 | Cmo-Chr7:1852197 | 4.98E-93 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo03g00016 | K00430 | - | csv:101202852 | 558.525 |