Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00091 ATGGAGGAATCTCCGAATGTGGATCTTCCGACGACGGAGAAAGAAATCGTACCGGAGAAGATTGAGGATGAAGAGATCAAAGATCCTTTGTGTCATTGCGATCTTTGCGATGCGGAACTTGTGCATAAACTCGCTCAGCTTCTTCTTCCTGGATTATCCACCGCATGCGTCGATAATACGACTGGAGGTATCTTTCGAACCCCTGGCTCCGTGGCTGCCGATATGAGGAAAGAAATGGTAGATTATTTAACCTTGAGGAGCGAAACTTTTGTTGCGGAATCTGTAATCTTAGAGAATGCTCCGGATGCGGAGTTATCCGATCATCCTTACGATATCATCTCTGATTTTGTTGAAGATTTTTCTCTGTCGAAGAGAAATTTTTTTAGTAGAGTTTCAGCCTGGGTTCTGAGTGAGAAAAGAGAGGACAAGATAGACGATTTTGTTCAGGAAATGGACGTCAATGGCTTTTGGCCGCTTGACAGGAGACAAGCAATTGCTCAGGCTTTGCTTAAGAACGTAGATTTCAAGAGTGAGTATCATTGTGACAAGAAATTCCACTCTGCAGAAGAATTAGCTGAACATGTTGAAATCTGTGGGTTTAGAACATTAACTTGCACAAATGAAGGCTGCACTGCACTATTTTGTGCAAACCACACAGAACAGCATGATTCCATTTGCCCTTTCAAGATAATTCAATGTGAACAGAAGTGTTCTGCCTTTATTATGAGACGTGAAATGGATCGCCATTGCATAACTGTTTGTCCAATGAAGCTTGTGAATTGCCCCTTCCATAATATGGGTTGCCAATTCCCTGTTCCTTACTCTTTGATTGCGCAGCATTGTACAGAGAGTTTTGATTCTCATTTGCTGCACATTCTTCACTCTATTCACAAGGAAGCCAATGAAGAGACTCTTAAACATCGACGACAACAGCTTGAAGAGGCAGCATCACTTGACCACCTTAGAGGGCTTCAAAACTTGAGATTGCTAACCAAGAAAATCAAAGAAATGGAATCTGAGCTAGGACCATTGGTAATCATCGCCGAGGTTGAGGAAACAGAAGAAGCGAAGGACGCGTCTAACAAAACTGAAGAAGGGAAGGAGACGTCTAATGCAACTGAAGAAGCAAAGGATGCCTCTAATGCAACCGAAGAGAAGAAAGACGTGTCGAATGGAACCGAAGAAACAAAGGACGCATCTATTGCAGCTGAAGAAACGAAGGATGCGCCTACTGCAATTCAAGAAAGGGAAGTCGTGTCTACAGCAATCGAAGAAACAAAGGGCACTTCAGGTGAAGGAGAAGAAGCCAATGATGCTGAAAAAGAAGAAACAAAGGATGCCATTATTGCTACTGAAGAAGGGAATGCTGTGCCTACTGCAATTCATGAAAGGGATGTCGTGTCGAGCGCAATTGAAGAAACGAAGGACGTTTCGCCTAAGGAAACAGAAGAACCGAATGACGCTTCTAATGAAAAAGAAGAAGCCAATGACGCTTCAAACGAAAAAGAGGAAACCGAAGATGCATCGACTGTAATTGAAGAAACAAAGGATGGTTCTGATTCGATCGAAACGAAGAATGCTTCTGATGCAGCAGAGGAAGAGACAAAGGATGCTACGAACGCAGAGGAGGAAGAGACAACGGACGCTTCGAACGCAAAGGAGGAGGGAGAAGAAGCGAAGAAGGAAACTGAAGAAAGCAAGGAGGGCGACAATGGAAGTGAAGAAAGGAAAGGTCCATCTAAAGGAATGGAAGAAAGAAAGGATGATCCAGATGAAGCTGAGAGATAA 1788 43.4 MEESPNVDLPTTEKEIVPEKIEDEEIKDPLCHCDLCDAELVHKLAQLLLPGLSTACVDNTTGGIFRTPGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVEDFSLSKRNFFSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEYHCDKKFHSAEELAEHVEICGFRTLTCTNEGCTALFCANHTEQHDSICPFKIIQCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNMGCQFPVPYSLIAQHCTESFDSHLLHILHSIHKEANEETLKHRRQQLEEAASLDHLRGLQNLRLLTKKIKEMESELGPLVIIAEVEETEEAKDASNKTEEGKETSNATEEAKDASNATEEKKDVSNGTEETKDASIAAEETKDAPTAIQEREVVSTAIEETKGTSGEGEEANDAEKEETKDAIIATEEGNAVPTAIHERDVVSSAIEETKDVSPKETEEPNDASNEKEEANDASNEKEETEDASTVIEETKDGSDSIETKNASDAAEEETKDATNAEEEETTDASNAKEEGEEAKKETEESKEGDNGSEERKGPSKGMEERKDDPDEAER 595
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1313763 1316959 - CmoCh03G000910.1 Cmo03g00091 377554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00091 595 MobiDBLite consensus disorder prediction 542 590 - -
Cmo03g00091 595 ProSiteProfiles Zinc finger TRAF-type profile. 222 273 IPR001293 GO:0008270
Cmo03g00091 595 Coils Coil 488 508 - -
Cmo03g00091 595 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 221 286 IPR013083 -
Cmo03g00091 595 MobiDBLite consensus disorder prediction 353 595 - -
Cmo03g00091 595 MobiDBLite consensus disorder prediction 428 449 - -
Cmo03g00091 595 MobiDBLite consensus disorder prediction 353 412 - -
Cmo03g00091 595 PANTHER NEUROFILAMENT HEAVY POLYPEPTIDE-LIKE 5 554 - -
Cmo03g00091 595 SUPERFAMILY TRAF domain-like 237 290 - -
Cmo03g00091 595 MobiDBLite consensus disorder prediction 466 535 - -
Cmo03g00091 595 Pfam TRAF-type zinc finger 222 280 IPR001293 GO:0008270
Cmo03g00091 595 PANTHER TNF RECEPTOR ASSOCIATED FACTOR 5 554 IPR043211 -
Cmo03g00091 595 Coils Coil 524 562 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00091 Cmo07g01342 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00091 Cmo-Chr3:1313763 Cmo07g01342 Cmo-Chr7:7608369 6.31E-06 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00091 - - csv:101209212 771.155